RNA–Protein interactions for RNA: ENST00000339987.7

SDCBP2-201, Transcript of syndecan binding protein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDCBP2, Length 1,404 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP2-201ENST00000339987 RAB6CQ53S08 254 aa18.6■□□□□ 0.57
SDCBP2-201ENST00000339987 BRMS1LQ5PSV4 323 aa18.6■□□□□ 0.57
SDCBP2-201ENST00000339987 POTEHQ6S545 545 aa18.6■□□□□ 0.57
SDCBP2-201ENST00000339987 PLD4Q96BZ4 506 aa18.6■□□□□ 0.57
SDCBP2-201ENST00000339987 ZSWIM3Q96MP5 696 aa18.6■□□□□ 0.57
SDCBP2-201ENST00000339987 IRX2Q9BZI1 471 aaPredicted RBP18.6■□□□□ 0.57
SDCBP2-201ENST00000339987 RAB6CQ9H0N0 254 aa18.6■□□□□ 0.57
SDCBP2-201ENST00000339987 GOLPH3Q9H4A6 298 aa18.6■□□□□ 0.57
SDCBP2-201ENST00000339987 USTQ9Y2C2 406 aa18.6■□□□□ 0.57
SDCBP2-201ENST00000339987 CPQQ9Y646 472 aa18.6■□□□□ 0.57
SDCBP2-201ENST00000339987 ZFP37Q9Y6Q3 630 aaPredicted RBP18.6■□□□□ 0.57
SDCBP2-201ENST00000339987 NUP210Q8TEM1 1887 aaPredicted RBP18.59■□□□□ 0.57
SDCBP2-201ENST00000339987 SYNJ2BP-COX16A0A087WUM0 186 aa18.59■□□□□ 0.57
SDCBP2-201ENST00000339987 MBTPS2O43462 519 aa18.59■□□□□ 0.57
SDCBP2-201ENST00000339987 TCF3P15923 654 aa18.59■□□□□ 0.57
SDCBP2-201ENST00000339987 MIPP30301 263 aa18.59■□□□□ 0.57
SDCBP2-201ENST00000339987 CCR1P32246 355 aa18.59■□□□□ 0.57
SDCBP2-201ENST00000339987 ATXN1P54253 815 aaKnown RBP18.59■□□□□ 0.57
SDCBP2-201ENST00000339987 LEXMQ3ZCV2 418 aa18.59■□□□□ 0.57
SDCBP2-201ENST00000339987 NUGGCQ68CJ6 796 aa18.59■□□□□ 0.57
SDCBP2-201ENST00000339987 DDX42Q86XP3 938 aaKnown RBP eCLIP18.59■□□□□ 0.57
SDCBP2-201ENST00000339987 CPNE8Q86YQ8 564 aa18.59■□□□□ 0.57
SDCBP2-201ENST00000339987 MAFAQ8NHW3 353 aaPredicted RBP18.59■□□□□ 0.57
SDCBP2-201ENST00000339987 SLTMQ9NWH9 1034 aaKnown RBP eCLIP18.59■□□□□ 0.57
SDCBP2-201ENST00000339987 COX16Q9P0S2 106 aa18.59■□□□□ 0.57
SDCBP2-201ENST00000339987 USP18Q9UMW8 372 aa18.59■□□□□ 0.57
SDCBP2-201ENST00000339987 HELZP42694 1942 aaKnown RBP18.59■□□□□ 0.57
SDCBP2-201ENST00000339987 SPOPO43791 374 aa18.58■□□□□ 0.57
SDCBP2-201ENST00000339987 STC2O76061 302 aa18.58■□□□□ 0.57
SDCBP2-201ENST00000339987 MSNP26038 577 aaKnown RBP18.58■□□□□ 0.57
SDCBP2-201ENST00000339987 AIF1P55008 147 aa18.58■□□□□ 0.57
SDCBP2-201ENST00000339987 SLC25A11Q02978 314 aaKnown RBP18.58■□□□□ 0.57
SDCBP2-201ENST00000339987 MTA1Q13330 715 aa18.58■□□□□ 0.57
SDCBP2-201ENST00000339987 HADHQ16836 314 aaKnown RBP18.58■□□□□ 0.57
SDCBP2-201ENST00000339987 ZC3H12AQ5D1E8 599 aaKnown RBP18.58■□□□□ 0.57
SDCBP2-201ENST00000339987 LRRC38Q5VT99 294 aa18.58■□□□□ 0.57
SDCBP2-201ENST00000339987 NT5DC3Q86UY8 548 aa18.58■□□□□ 0.57
SDCBP2-201ENST00000339987 FAM131BQ86XD5 332 aa18.58■□□□□ 0.57
SDCBP2-201ENST00000339987 ZSCAN18Q8TBC5 510 aaPredicted RBP18.58■□□□□ 0.57
SDCBP2-201ENST00000339987 USP13Q92995 863 aaPredicted RBP18.58■□□□□ 0.57
SDCBP2-201ENST00000339987 CD101Q93033 1021 aa18.58■□□□□ 0.57
SDCBP2-201ENST00000339987 NTAN1Q96AB6 310 aa18.58■□□□□ 0.57
SDCBP2-201ENST00000339987 MYADMQ96S97 322 aa18.58■□□□□ 0.57
SDCBP2-201ENST00000339987 KIF9Q9HAQ2 790 aa18.58■□□□□ 0.57
SDCBP2-201ENST00000339987 TRPV4Q9HBA0 871 aa18.58■□□□□ 0.57
SDCBP2-201ENST00000339987 TDP1Q9NUW8 608 aa18.58■□□□□ 0.57
SDCBP2-201ENST00000339987 SMPD4Q9NXE4 827 aa18.58■□□□□ 0.57
SDCBP2-201ENST00000339987 ARHGEF38Q9NXL2 777 aa18.58■□□□□ 0.57
SDCBP2-201ENST00000339987 KCNU1A8MYU2 1149 aa18.57■□□□□ 0.56
SDCBP2-201ENST00000339987 PRPSAP2O60256 369 aa18.57■□□□□ 0.56
SDCBP2-201ENST00000339987 PRAMEF12O95522 483 aa18.57■□□□□ 0.56
SDCBP2-201ENST00000339987 TAS2R40P59535 323 aa18.57■□□□□ 0.56
SDCBP2-201ENST00000339987 SCAPQ12770 1279 aa18.57■□□□□ 0.56
SDCBP2-201ENST00000339987 ZNF569Q5MCW4 686 aa18.57■□□□□ 0.56
SDCBP2-201ENST00000339987 DAB2IPQ5VWQ8 1189 aa18.57■□□□□ 0.56
SDCBP2-201ENST00000339987 SCYL2Q6P3W7 929 aa18.57■□□□□ 0.56
SDCBP2-201ENST00000339987 CYP4V2Q6ZWL3 525 aaPredicted RBP18.57■□□□□ 0.56
SDCBP2-201ENST00000339987 PEX26Q7Z412 305 aa18.57■□□□□ 0.56
SDCBP2-201ENST00000339987 POLNQ7Z5Q5 900 aa18.57■□□□□ 0.56
SDCBP2-201ENST00000339987 ARID3BQ8IVW6 561 aaPredicted RBP18.57■□□□□ 0.56
SDCBP2-201ENST00000339987 UNC45BQ8IWX7 931 aa18.57■□□□□ 0.56
SDCBP2-201ENST00000339987 ADAMTS19Q8TE59 1207 aa18.57■□□□□ 0.56
SDCBP2-201ENST00000339987 SMARCD2Q92925 531 aa18.57■□□□□ 0.56
SDCBP2-201ENST00000339987 RNF34Q969K3 372 aa18.57■□□□□ 0.56
SDCBP2-201ENST00000339987 ASB16Q96NS5 453 aa18.57■□□□□ 0.56
SDCBP2-201ENST00000339987 PEBP4Q96S96 227 aa18.57■□□□□ 0.56
SDCBP2-201ENST00000339987 DCLK3Q9C098 648 aa18.57■□□□□ 0.56
SDCBP2-201ENST00000339987 WDCPQ9H6R7 721 aa18.57■□□□□ 0.56
SDCBP2-201ENST00000339987 GKN1Q9NS71 199 aa18.57■□□□□ 0.56
SDCBP2-201ENST00000339987 AMFRQ9UKV5 643 aa18.57■□□□□ 0.56
SDCBP2-201ENST00000339987 HYOU1Q9Y4L1 999 aa18.57■□□□□ 0.56
SDCBP2-201ENST00000339987 DOCK8Q8NF50 2099 aa18.57■□□□□ 0.56
SDCBP2-201ENST00000339987 LEFTY2O00292 366 aa18.57■□□□□ 0.56
SDCBP2-201ENST00000339987 PSTPIP1O43586 416 aa18.57■□□□□ 0.56
SDCBP2-201ENST00000339987 FTCDO95954 541 aa18.57■□□□□ 0.56
SDCBP2-201ENST00000339987 APOEP02649 317 aa18.57■□□□□ 0.56
SDCBP2-201ENST00000339987 HMBSP08397 361 aa18.57■□□□□ 0.56
SDCBP2-201ENST00000339987 KRT7P08729 469 aa18.57■□□□□ 0.56
SDCBP2-201ENST00000339987 TCF4P15884 667 aa18.57■□□□□ 0.56
SDCBP2-201ENST00000339987 ADRA1BP35368 520 aa18.57■□□□□ 0.56
SDCBP2-201ENST00000339987 SSR1P43307 286 aaKnown RBP18.57■□□□□ 0.56
SDCBP2-201ENST00000339987 KCNQ1P51787 676 aa18.57■□□□□ 0.56
SDCBP2-201ENST00000339987 ZXDBP98169 803 aa18.57■□□□□ 0.56
SDCBP2-201ENST00000339987 USP4Q13107 963 aa18.57■□□□□ 0.56
SDCBP2-201ENST00000339987 PUS10Q3MIT2 529 aaKnown RBP18.57■□□□□ 0.56
SDCBP2-201ENST00000339987 ARL13BQ3SXY8 428 aa18.57■□□□□ 0.56
SDCBP2-201ENST00000339987 BOLA3Q53S33 107 aa18.57■□□□□ 0.56
SDCBP2-201ENST00000339987 FAM78AQ5JUQ0 283 aa18.57■□□□□ 0.56
SDCBP2-201ENST00000339987 OTOP3Q7RTS5 596 aa18.57■□□□□ 0.56
SDCBP2-201ENST00000339987 PSTKQ8IV42 348 aaKnown RBP18.57■□□□□ 0.56
SDCBP2-201ENST00000339987 RHOT1Q8IXI2 618 aa18.57■□□□□ 0.56
SDCBP2-201ENST00000339987 CCDC185Q8N715 623 aa18.57■□□□□ 0.56
SDCBP2-201ENST00000339987 KIAA1958Q8N8K9 716 aa18.57■□□□□ 0.56
SDCBP2-201ENST00000339987 ATP6V0D2Q8N8Y2 350 aa18.57■□□□□ 0.56
SDCBP2-201ENST00000339987 TEKT4Q8WW24 435 aa18.57■□□□□ 0.56
SDCBP2-201ENST00000339987 AZIN2Q96A70 460 aa18.57■□□□□ 0.56
SDCBP2-201ENST00000339987 TKTL2Q9H0I9 626 aa18.57■□□□□ 0.56
SDCBP2-201ENST00000339987 SMG9Q9H0W8 520 aaKnown RBP18.57■□□□□ 0.56
SDCBP2-201ENST00000339987 OBP2AQ9NY56 170 aa18.57■□□□□ 0.56
SDCBP2-201ENST00000339987 PCSK1NQ9UHG2 260 aa18.57■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms