RNA–Protein interactions for RNA: ENST00000339436.11

SRSF3-201, Transcript of serine and arginine rich splicing factor 3, humanhuman

TSL 2

Gene SRSF3, Length 1,518 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF3-201ENST00000339436 DENND1CQ8IV53 801 aa13.39□□□□□ -0.27
SRSF3-201ENST00000339436 DRC7Q8IY82 874 aa13.39□□□□□ -0.27
SRSF3-201ENST00000339436 SLC39A13Q96H72 371 aa13.39□□□□□ -0.27
SRSF3-201ENST00000339436 FCRL2Q96LA5 508 aaPredicted RBP13.39□□□□□ -0.27
SRSF3-201ENST00000339436 ZNF510Q9Y2H8 683 aa13.39□□□□□ -0.27
SRSF3-201ENST00000339436 VPS13AQ96RL7 3174 aa13.38□□□□□ -0.27
SRSF3-201ENST00000339436 TCRBV5S1A1TA0A578 114 aa13.38□□□□□ -0.27
SRSF3-201ENST00000339436 TMCO5BA8MYB1 307 aa13.38□□□□□ -0.27
SRSF3-201ENST00000339436 PRR33A8MZF0 331 aa13.38□□□□□ -0.27
SRSF3-201ENST00000339436 MAN2B1O00754 1011 aa13.38□□□□□ -0.27
SRSF3-201ENST00000339436 LATS1O95835 1130 aa13.38□□□□□ -0.27
SRSF3-201ENST00000339436 GJA4P35212 333 aa13.38□□□□□ -0.27
SRSF3-201ENST00000339436 ADKP55263 362 aaKnown RBP13.38□□□□□ -0.27
SRSF3-201ENST00000339436 RNASE9P60153 205 aaKnown RBP13.38□□□□□ -0.27
SRSF3-201ENST00000339436 GAB4Q2WGN9 574 aa13.38□□□□□ -0.27
SRSF3-201ENST00000339436 LY6G5CQ5SRR4 150 aa13.38□□□□□ -0.27
SRSF3-201ENST00000339436 TXNDC11Q6PKC3 985 aa13.38□□□□□ -0.27
SRSF3-201ENST00000339436 FAM217AQ8IXS0 508 aa13.38□□□□□ -0.27
SRSF3-201ENST00000339436 MCOLN2Q8IZK6 566 aa13.38□□□□□ -0.27
SRSF3-201ENST00000339436 ADGRG2Q8IZP9 1017 aa13.38□□□□□ -0.27
SRSF3-201ENST00000339436 NT5C3BQ969T7 300 aa13.38□□□□□ -0.27
SRSF3-201ENST00000339436 PBXIP1Q96AQ6 731 aa13.38□□□□□ -0.27
SRSF3-201ENST00000339436 VCPIP1Q96JH7 1222 aa13.38□□□□□ -0.27
SRSF3-201ENST00000339436 NPY6RQ99463 290 aa13.38□□□□□ -0.27
SRSF3-201ENST00000339436 ADAM33Q9BZ11 813 aa13.38□□□□□ -0.27
SRSF3-201ENST00000339436 FOXQ1Q9C009 403 aa13.38□□□□□ -0.27
SRSF3-201ENST00000339436 DDIT4Q9NX09 232 aa13.38□□□□□ -0.27
SRSF3-201ENST00000339436 RRN3Q9NYV6 651 aa13.38□□□□□ -0.27
SRSF3-201ENST00000339436 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP13.38□□□□□ -0.27
SRSF3-201ENST00000339436 ADAMTS1Q9UHI8 967 aa13.38□□□□□ -0.27
SRSF3-201ENST00000339436 AGO1Q9UL18 857 aaKnown RBP13.38□□□□□ -0.27
SRSF3-201ENST00000339436 STAP1Q9ULZ2 295 aa13.38□□□□□ -0.27
SRSF3-201ENST00000339436 A0A087X0T9 212 aa13.37□□□□□ -0.27
SRSF3-201ENST00000339436 KANSL1LA0AUZ9 987 aa13.37□□□□□ -0.27
SRSF3-201ENST00000339436 AKR1B15C9JRZ8 316 aaPredicted RBP13.37□□□□□ -0.27
SRSF3-201ENST00000339436 HOXC11O43248 304 aaPredicted RBP13.37□□□□□ -0.27
SRSF3-201ENST00000339436 FAM228BP0C875 321 aa13.37□□□□□ -0.27
SRSF3-201ENST00000339436 ADH5P11766 374 aa13.37□□□□□ -0.27
SRSF3-201ENST00000339436 CD72P21854 359 aa13.37□□□□□ -0.27
SRSF3-201ENST00000339436 RRM1P23921 792 aa13.37□□□□□ -0.27
SRSF3-201ENST00000339436 NR1H3Q13133 447 aa13.37□□□□□ -0.27
SRSF3-201ENST00000339436 DNAJC24Q6P3W2 148 aa13.37□□□□□ -0.27
SRSF3-201ENST00000339436 RHBDF2Q6PJF5 856 aa13.37□□□□□ -0.27
SRSF3-201ENST00000339436 ZNF852Q6ZMS4 543 aa13.37□□□□□ -0.27
SRSF3-201ENST00000339436 PHLDB2Q86SQ0 1253 aa13.37□□□□□ -0.27
SRSF3-201ENST00000339436 UNC45BQ8IWX7 931 aa13.37□□□□□ -0.27
SRSF3-201ENST00000339436 CPXM2Q8N436 756 aa13.37□□□□□ -0.27
SRSF3-201ENST00000339436 FBXL6Q8N531 539 aa13.37□□□□□ -0.27
SRSF3-201ENST00000339436 TC2NQ8N9U0 490 aa13.37□□□□□ -0.27
SRSF3-201ENST00000339436 FLCNQ8NFG4 579 aa13.37□□□□□ -0.27
SRSF3-201ENST00000339436 PJA1Q8NG27 643 aa13.37□□□□□ -0.27
SRSF3-201ENST00000339436 FAM3CQ92520 227 aa13.37□□□□□ -0.27
SRSF3-201ENST00000339436 LTB4R2Q9NPC1 389 aa13.37□□□□□ -0.27
SRSF3-201ENST00000339436 SPHK2Q9NRA0 654 aa13.37□□□□□ -0.27
SRSF3-201ENST00000339436 ZNHIT6Q9NWK9 470 aaKnown RBP13.37□□□□□ -0.27
SRSF3-201ENST00000339436 MARK1Q9P0L2 795 aa13.37□□□□□ -0.27
SRSF3-201ENST00000339436 CALCOCO1Q9P1Z2 691 aa13.37□□□□□ -0.27
SRSF3-201ENST00000339436 STOML2Q9UJZ1 356 aa13.37□□□□□ -0.27
SRSF3-201ENST00000339436 SSU72P8A0A1W2PR75 194 aa13.36□□□□□ -0.27
SRSF3-201ENST00000339436 C2CD4BA6NLJ0 364 aa13.36□□□□□ -0.27
SRSF3-201ENST00000339436 M0QYT0 321 aa13.36□□□□□ -0.27
SRSF3-201ENST00000339436 ATMINO43313 823 aaPredicted RBP13.36□□□□□ -0.27
SRSF3-201ENST00000339436 RTN2O75298 545 aa13.36□□□□□ -0.27
SRSF3-201ENST00000339436 GJB6O95452 261 aa13.36□□□□□ -0.27
SRSF3-201ENST00000339436 APOEP02649 317 aa13.36□□□□□ -0.27
SRSF3-201ENST00000339436 FTLP02792 175 aaPredicted RBP13.36□□□□□ -0.27
SRSF3-201ENST00000339436 KRT3P12035 628 aa13.36□□□□□ -0.27
SRSF3-201ENST00000339436 TFE3P19532 575 aaPredicted RBP13.36□□□□□ -0.27
SRSF3-201ENST00000339436 TARSP26639 723 aaKnown RBP13.36□□□□□ -0.27
SRSF3-201ENST00000339436 EIF4A3P38919 411 aaKnown RBP13.36□□□□□ -0.27
SRSF3-201ENST00000339436 SULT1E1P49888 294 aa13.36□□□□□ -0.27
SRSF3-201ENST00000339436 VCPP55072 806 aaKnown RBP13.36□□□□□ -0.27
SRSF3-201ENST00000339436 AMPD2Q01433 879 aa13.36□□□□□ -0.27
SRSF3-201ENST00000339436 TSR1Q2NL82 804 aaKnown RBP13.36□□□□□ -0.27
SRSF3-201ENST00000339436 SLC25A52Q3SY17 297 aa13.36□□□□□ -0.27
SRSF3-201ENST00000339436 PPP1R15BQ5SWA1 713 aa13.36□□□□□ -0.27
SRSF3-201ENST00000339436 NAIF1Q69YI7 327 aaPredicted RBP13.36□□□□□ -0.27
SRSF3-201ENST00000339436 DNAAF5Q86Y56 855 aa13.36□□□□□ -0.27
SRSF3-201ENST00000339436 TMEM25Q86YD3 366 aa13.36□□□□□ -0.27
SRSF3-201ENST00000339436 ZNF687Q8N1G0 1237 aa13.36□□□□□ -0.27
SRSF3-201ENST00000339436 EMC1Q8N766 993 aa13.36□□□□□ -0.27
SRSF3-201ENST00000339436 JOSD2Q8TAC2 188 aa13.36□□□□□ -0.27
SRSF3-201ENST00000339436 PGAP3Q96FM1 320 aaPredicted RBP13.36□□□□□ -0.27
SRSF3-201ENST00000339436 CFAP57Q96MR6 1250 aa13.36□□□□□ -0.27
SRSF3-201ENST00000339436 TBCBQ99426 244 aa13.36□□□□□ -0.27
SRSF3-201ENST00000339436 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP13.36□□□□□ -0.27
SRSF3-201ENST00000339436 SELENOOQ9BVL4 669 aa13.36□□□□□ -0.27
SRSF3-201ENST00000339436 ISCUQ9H1K1 167 aa13.36□□□□□ -0.27
SRSF3-201ENST00000339436 NENFQ9UMX5 172 aa13.36□□□□□ -0.27
SRSF3-201ENST00000339436 MRPS17Q9Y2R5 130 aaKnown RBP13.36□□□□□ -0.27
SRSF3-201ENST00000339436 SYNJ2BP-COX16A0A087WUM0 186 aa13.35□□□□□ -0.27
SRSF3-201ENST00000339436 SIGLEC16A6NMB1 481 aa13.35□□□□□ -0.27
SRSF3-201ENST00000339436 MYBL1P10243 752 aa13.35□□□□□ -0.27
SRSF3-201ENST00000339436 AOC1P19801 751 aa13.35□□□□□ -0.27
SRSF3-201ENST00000339436 CDC25BP30305 580 aa13.35□□□□□ -0.27
SRSF3-201ENST00000339436 CCR1P32246 355 aa13.35□□□□□ -0.27
SRSF3-201ENST00000339436 GBP1P32455 592 aa13.35□□□□□ -0.27
SRSF3-201ENST00000339436 CHKAP35790 457 aa13.35□□□□□ -0.27
SRSF3-201ENST00000339436 SLC11A2P49281 568 aa13.35□□□□□ -0.27
SRSF3-201ENST00000339436 GAD2Q05329 585 aa13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms