RNA–Protein interactions for RNA: ENST00000336873.9

HPS4-201, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene HPS4, Length 3,786 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-201ENST00000336873 C12orf56Q8IXR9 622 aa8.49□□□□□ -1.05
HPS4-201ENST00000336873 WDTC1Q8N5D0 677 aa8.49□□□□□ -1.05
HPS4-201ENST00000336873 SLC4A11Q8NBS3 891 aa8.49□□□□□ -1.05
HPS4-201ENST00000336873 B3GALT6Q96L58 329 aa8.49□□□□□ -1.05
HPS4-201ENST00000336873 NTPCRQ9BSD7 190 aaKnown RBP8.49□□□□□ -1.05
HPS4-201ENST00000336873 VPS33BQ9H267 617 aa8.49□□□□□ -1.05
HPS4-201ENST00000336873 ETNK2Q9NVF9 386 aa8.49□□□□□ -1.05
HPS4-201ENST00000336873 WDR35Q9P2L0 1181 aa8.49□□□□□ -1.05
HPS4-201ENST00000336873 SHOC2Q9UQ13 582 aa8.49□□□□□ -1.05
HPS4-201ENST00000336873 TBC1D12O60347 775 aa8.49□□□□□ -1.05
HPS4-201ENST00000336873 EDF1O60869 148 aaKnown RBP8.49□□□□□ -1.05
HPS4-201ENST00000336873 TRUB2O95900 331 aaKnown RBP8.49□□□□□ -1.05
HPS4-201ENST00000336873 PIRTP0C851 137 aa8.49□□□□□ -1.05
HPS4-201ENST00000336873 NELFEP18615 380 aaKnown RBP8.49□□□□□ -1.05
HPS4-201ENST00000336873 KCNA3P22001 575 aa8.49□□□□□ -1.05
HPS4-201ENST00000336873 IVDP26440 423 aa8.49□□□□□ -1.05
HPS4-201ENST00000336873 SNRPFP62306 86 aaKnown RBP8.49□□□□□ -1.05
HPS4-201ENST00000336873 PITX1P78337 314 aaPredicted RBP8.49□□□□□ -1.05
HPS4-201ENST00000336873 TNFAIP2Q03169 654 aa8.49□□□□□ -1.05
HPS4-201ENST00000336873 PRPSAP1Q14558 356 aa8.49□□□□□ -1.05
HPS4-201ENST00000336873 BOLA3Q53S33 107 aa8.49□□□□□ -1.05
HPS4-201ENST00000336873 GNASQ5JWF2 1037 aa8.49□□□□□ -1.05
HPS4-201ENST00000336873 RNASEH2BQ5TBB1 312 aaKnown RBP8.49□□□□□ -1.05
HPS4-201ENST00000336873 XYLT1Q86Y38 959 aa8.49□□□□□ -1.05
HPS4-201ENST00000336873 ANKRD13AQ8IZ07 590 aa8.49□□□□□ -1.05
HPS4-201ENST00000336873 TFB1MQ8WVM0 346 aaKnown RBP8.49□□□□□ -1.05
HPS4-201ENST00000336873 AP5M1Q9H0R1 490 aa8.49□□□□□ -1.05
HPS4-201ENST00000336873 CXCL16Q9H2A7 254 aa8.49□□□□□ -1.05
HPS4-201ENST00000336873 PRDM12Q9H4Q4 367 aa8.49□□□□□ -1.05
HPS4-201ENST00000336873 NDE1Q9NXR1 346 aa8.49□□□□□ -1.05
HPS4-201ENST00000336873 ATP6AP2A0A1C7CYW4 349 aa8.48□□□□□ -1.05
HPS4-201ENST00000336873 UBA6A0AVT1 1052 aaPredicted RBP8.48□□□□□ -1.05
HPS4-201ENST00000336873 ALOX15BO15296 676 aa8.48□□□□□ -1.05
HPS4-201ENST00000336873 USP2O75604 605 aaPredicted RBP8.48□□□□□ -1.05
HPS4-201ENST00000336873 ATP6AP2O75787 350 aa8.48□□□□□ -1.05
HPS4-201ENST00000336873 AP1G2O75843 785 aa8.48□□□□□ -1.05
HPS4-201ENST00000336873 LYPLA2O95372 231 aa8.48□□□□□ -1.05
HPS4-201ENST00000336873 METTL18O95568 372 aa8.48□□□□□ -1.05
HPS4-201ENST00000336873 IQCF3P0C7M6 154 aa8.48□□□□□ -1.05
HPS4-201ENST00000336873 ZBTB48P10074 688 aaPredicted RBP8.48□□□□□ -1.05
HPS4-201ENST00000336873 TKTL1P51854 596 aa8.48□□□□□ -1.05
HPS4-201ENST00000336873 TAP1Q03518 808 aa8.48□□□□□ -1.05
HPS4-201ENST00000336873 MCL1Q07820 350 aa8.48□□□□□ -1.05
HPS4-201ENST00000336873 NSUN2Q08J23 767 aaKnown RBP eCLIP8.48□□□□□ -1.05
HPS4-201ENST00000336873 MGAT5Q09328 741 aa8.48□□□□□ -1.05
HPS4-201ENST00000336873 ZNF252P-AS1Q0IIN9 211 aa8.48□□□□□ -1.05
HPS4-201ENST00000336873 HIC1Q14526 733 aa8.48□□□□□ -1.05
HPS4-201ENST00000336873 DBN1Q16643 649 aa8.48□□□□□ -1.05
HPS4-201ENST00000336873 PDK4Q16654 411 aa8.48□□□□□ -1.05
HPS4-201ENST00000336873 SLC10A6Q3KNW5 377 aa8.48□□□□□ -1.05
HPS4-201ENST00000336873 WSCD1Q658N2 575 aa8.48□□□□□ -1.05
HPS4-201ENST00000336873 ZPBP2Q6X784 338 aa8.48□□□□□ -1.05
HPS4-201ENST00000336873 CDHR3Q6ZTQ4 885 aa8.48□□□□□ -1.05
HPS4-201ENST00000336873 EIF1ADQ8N9N8 165 aaKnown RBP8.48□□□□□ -1.05
HPS4-201ENST00000336873 ICA1LQ8NDH6 482 aa8.48□□□□□ -1.05
HPS4-201ENST00000336873 ZSCAN18Q8TBC5 510 aaPredicted RBP8.48□□□□□ -1.05
HPS4-201ENST00000336873 RNF157Q96PX1 679 aa8.48□□□□□ -1.05
HPS4-201ENST00000336873 GAD1Q99259 594 aa8.48□□□□□ -1.05
HPS4-201ENST00000336873 PCYT2Q99447 389 aa8.48□□□□□ -1.05
HPS4-201ENST00000336873 GPR20Q99678 358 aa8.48□□□□□ -1.05
HPS4-201ENST00000336873 APBA2Q99767 749 aa8.48□□□□□ -1.05
HPS4-201ENST00000336873 RNF39Q9H2S5 420 aa8.48□□□□□ -1.05
HPS4-201ENST00000336873 PNPOQ9NVS9 261 aa8.48□□□□□ -1.05
HPS4-201ENST00000336873 GPRC5DQ9NZD1 345 aa8.48□□□□□ -1.05
HPS4-201ENST00000336873 ATRNL1Q5VV63 1379 aa8.48□□□□□ -1.05
HPS4-201ENST00000336873 NUMA1Q14980 2115 aa8.48□□□□□ -1.05
HPS4-201ENST00000336873 C9JVG2 144 aa8.48□□□□□ -1.05
HPS4-201ENST00000336873 RNF103O00237 685 aa8.48□□□□□ -1.05
HPS4-201ENST00000336873 DNAJC8O75937 253 aaPredicted RBP8.48□□□□□ -1.05
HPS4-201ENST00000336873 ETS2P15036 469 aa8.48□□□□□ -1.05
HPS4-201ENST00000336873 ARL2P36404 184 aa8.48□□□□□ -1.05
HPS4-201ENST00000336873 GARSP41250 739 aaKnown RBP8.48□□□□□ -1.05
HPS4-201ENST00000336873 NUDT2P50583 147 aa8.48□□□□□ -1.05
HPS4-201ENST00000336873 PRAMEP78395 509 aa8.48□□□□□ -1.05
HPS4-201ENST00000336873 COG7P83436 770 aa8.48□□□□□ -1.05
HPS4-201ENST00000336873 GRIK4Q16099 956 aa8.48□□□□□ -1.05
HPS4-201ENST00000336873 FBXO47Q5MNV8 452 aa8.48□□□□□ -1.05
HPS4-201ENST00000336873 CELF3Q5SZQ8 465 aaKnown RBP8.48□□□□□ -1.05
HPS4-201ENST00000336873 THEMIS2Q5TEJ8 643 aa8.48□□□□□ -1.05
HPS4-201ENST00000336873 FKBP1CQ5VVH2 108 aa8.48□□□□□ -1.05
HPS4-201ENST00000336873 IYDQ6PHW0 289 aa8.48□□□□□ -1.05
HPS4-201ENST00000336873 CLNKQ7Z7G1 428 aa8.48□□□□□ -1.05
HPS4-201ENST00000336873 PIGZQ86VD9 579 aa8.48□□□□□ -1.05
HPS4-201ENST00000336873 DEFB107AQ8IZN7 70 aa8.48□□□□□ -1.05
HPS4-201ENST00000336873 AGGF1Q8N302 714 aaeCLIP8.48□□□□□ -1.05
HPS4-201ENST00000336873 CCDC185Q8N715 623 aa8.48□□□□□ -1.05
HPS4-201ENST00000336873 SKA2Q8WVK7 121 aaPredicted RBP8.48□□□□□ -1.05
HPS4-201ENST00000336873 SCG3Q8WXD2 468 aaKnown RBP8.48□□□□□ -1.05
HPS4-201ENST00000336873 OXNAD1Q96HP4 312 aaPredicted RBP8.48□□□□□ -1.05
HPS4-201ENST00000336873 KCNK16Q96T55 309 aa8.48□□□□□ -1.05
HPS4-201ENST00000336873 TBCBQ99426 244 aa8.48□□□□□ -1.05
HPS4-201ENST00000336873 SYT11Q9BT88 431 aa8.48□□□□□ -1.05
HPS4-201ENST00000336873 NUF2Q9BZD4 464 aa8.48□□□□□ -1.05
HPS4-201ENST00000336873 WWP1Q9H0M0 922 aa8.48□□□□□ -1.05
HPS4-201ENST00000336873 RABGEF1Q9UJ41 708 aa8.48□□□□□ -1.05
HPS4-201ENST00000336873 WASF2Q9Y6W5 498 aa8.48□□□□□ -1.05
HPS4-201ENST00000336873 TPP1O14773 563 aa8.48□□□□□ -1.05
HPS4-201ENST00000336873 ASMTLO95671 621 aa8.48□□□□□ -1.05
HPS4-201ENST00000336873 HOXC6P09630 235 aa8.48□□□□□ -1.05
HPS4-201ENST00000336873 IL1RL1Q01638 556 aa8.48□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 97.8 ms