RNA–Protein interactions for RNA: ENST00000334634.8

TRIM46-201, Transcript of tripartite motif containing 46, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM46, Length 3,061 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM46-201ENST00000334634 SFMBT1Q9UHJ3 866 aa13.24□□□□□ -0.29
TRIM46-201ENST00000334634 XPO7Q9UIA9 1087 aaKnown RBP13.24□□□□□ -0.29
TRIM46-201ENST00000334634 KCNK1O00180 336 aa13.23□□□□□ -0.29
TRIM46-201ENST00000334634 FAM155BO75949 473 aa13.23□□□□□ -0.29
TRIM46-201ENST00000334634 DRD4P21917 467 aa13.23□□□□□ -0.29
TRIM46-201ENST00000334634 WARSP23381 471 aaKnown RBP13.23□□□□□ -0.29
TRIM46-201ENST00000334634 PCK1P35558 622 aa13.23□□□□□ -0.29
TRIM46-201ENST00000334634 GPX6P59796 221 aa13.23□□□□□ -0.29
TRIM46-201ENST00000334634 YWHAZP63104 245 aaKnown RBP13.23□□□□□ -0.29
TRIM46-201ENST00000334634 DDR2Q16832 855 aa13.23□□□□□ -0.29
TRIM46-201ENST00000334634 C6orf89Q6UWU4 347 aa13.23□□□□□ -0.29
TRIM46-201ENST00000334634 DEFB128Q7Z7B8 93 aa13.23□□□□□ -0.29
TRIM46-201ENST00000334634 ECHDC2Q86YB7 292 aa13.23□□□□□ -0.29
TRIM46-201ENST00000334634 NKD2Q969F2 451 aaPredicted RBP13.23□□□□□ -0.29
TRIM46-201ENST00000334634 FAXDC2Q96IV6 333 aa13.23□□□□□ -0.29
TRIM46-201ENST00000334634 CSPG4P5Q96PW8 444 aa13.23□□□□□ -0.29
TRIM46-201ENST00000334634 HNRNPABQ99729 332 aaKnown RBP13.23□□□□□ -0.29
TRIM46-201ENST00000334634 SIK2Q9H0K1 926 aa13.23□□□□□ -0.29
TRIM46-201ENST00000334634 UNC93B1Q9H1C4 597 aa13.23□□□□□ -0.29
TRIM46-201ENST00000334634 NRDE2Q9H7Z3 1164 aa13.23□□□□□ -0.29
TRIM46-201ENST00000334634 USP29Q9HBJ7 922 aa13.23□□□□□ -0.29
TRIM46-201ENST00000334634 ALG13Q9NP73 1137 aaKnown RBP13.23□□□□□ -0.29
TRIM46-201ENST00000334634 ABI2Q9NYB9 513 aaPredicted RBP13.23□□□□□ -0.29
TRIM46-201ENST00000334634 RASA4BC9J798 803 aa13.23□□□□□ -0.29
TRIM46-201ENST00000334634 MDM4O15151 490 aa13.23□□□□□ -0.29
TRIM46-201ENST00000334634 RASA4O43374 803 aa13.23□□□□□ -0.29
TRIM46-201ENST00000334634 AGTP01019 485 aa13.23□□□□□ -0.29
TRIM46-201ENST00000334634 APRTP07741 180 aa13.23□□□□□ -0.29
TRIM46-201ENST00000334634 GCKP35557 465 aa13.23□□□□□ -0.29
TRIM46-201ENST00000334634 ROR1Q01973 937 aa13.23□□□□□ -0.29
TRIM46-201ENST00000334634 SPARCL1Q14515 664 aa13.23□□□□□ -0.29
TRIM46-201ENST00000334634 GPNMBQ14956 572 aa13.23□□□□□ -0.29
TRIM46-201ENST00000334634 KCNT2Q6UVM3 1135 aa13.23□□□□□ -0.29
TRIM46-201ENST00000334634 SLC26A9Q7LBE3 791 aa13.23□□□□□ -0.29
TRIM46-201ENST00000334634 CCDC197Q8NCU1 140 aa13.23□□□□□ -0.29
TRIM46-201ENST00000334634 CNOT10Q9H9A5 744 aaKnown RBP13.23□□□□□ -0.29
TRIM46-201ENST00000334634 REV3LO60673 3130 aa13.23□□□□□ -0.29
TRIM46-201ENST00000334634 A0A1W2PPM1 405 aa13.22□□□□□ -0.29
TRIM46-201ENST00000334634 CCDC78A2IDD5 438 aa13.22□□□□□ -0.29
TRIM46-201ENST00000334634 ENO4A6NNW6 628 aa13.22□□□□□ -0.29
TRIM46-201ENST00000334634 XPO1O14980 1071 aaKnown RBP13.22□□□□□ -0.29
TRIM46-201ENST00000334634 MFSD11O43934 449 aa13.22□□□□□ -0.29
TRIM46-201ENST00000334634 TOMM70O94826 608 aa13.22□□□□□ -0.29
TRIM46-201ENST00000334634 ITGAVP06756 1048 aa13.22□□□□□ -0.29
TRIM46-201ENST00000334634 GCAP28676 217 aa13.22□□□□□ -0.29
TRIM46-201ENST00000334634 PNPLA4P41247 253 aa13.22□□□□□ -0.29
TRIM46-201ENST00000334634 CCNHP51946 323 aaPredicted RBP13.22□□□□□ -0.29
TRIM46-201ENST00000334634 RNASELQ05823 741 aaKnown RBP13.22□□□□□ -0.29
TRIM46-201ENST00000334634 TRAF7Q6Q0C0 670 aa13.22□□□□□ -0.29
TRIM46-201ENST00000334634 HOMEZQ8IX15 550 aa13.22□□□□□ -0.29
TRIM46-201ENST00000334634 MPP5Q8N3R9 675 aa13.22□□□□□ -0.29
TRIM46-201ENST00000334634 TOP6BLQ8N6T0 577 aa13.22□□□□□ -0.29
TRIM46-201ENST00000334634 NSMCE1Q8WV22 266 aa13.22□□□□□ -0.29
TRIM46-201ENST00000334634 CELF6Q96J87 481 aaKnown RBP13.22□□□□□ -0.29
TRIM46-201ENST00000334634 DDIT4Q9NX09 232 aa13.22□□□□□ -0.29
TRIM46-201ENST00000334634 SLC27A5Q9Y2P5 690 aa13.22□□□□□ -0.29
TRIM46-201ENST00000334634 CLUHO75153 1309 aa13.22□□□□□ -0.29
TRIM46-201ENST00000334634 APOL1O14791 398 aa13.22□□□□□ -0.29
TRIM46-201ENST00000334634 USP12O75317 370 aa13.22□□□□□ -0.29
TRIM46-201ENST00000334634 SRGAP2BP0DMP2 458 aa13.22□□□□□ -0.29
TRIM46-201ENST00000334634 VAV1P15498 845 aa13.22□□□□□ -0.29
TRIM46-201ENST00000334634 MMP13P45452 471 aa13.22□□□□□ -0.29
TRIM46-201ENST00000334634 DSC3Q14574 896 aa13.22□□□□□ -0.29
TRIM46-201ENST00000334634 NOMO1Q15155 1222 aa13.22□□□□□ -0.29
TRIM46-201ENST00000334634 LIMS2Q7Z4I7 341 aa13.22□□□□□ -0.29
TRIM46-201ENST00000334634 ATAD1Q8NBU5 361 aa13.22□□□□□ -0.29
TRIM46-201ENST00000334634 CCNYQ8ND76 341 aa13.22□□□□□ -0.29
TRIM46-201ENST00000334634 FBXO36Q8NEA4 188 aa13.22□□□□□ -0.29
TRIM46-201ENST00000334634 FAF2Q96CS3 445 aa13.22□□□□□ -0.29
TRIM46-201ENST00000334634 PGM2Q96G03 612 aa13.22□□□□□ -0.29
TRIM46-201ENST00000334634 DEFB118Q96PH6 123 aa13.22□□□□□ -0.29
TRIM46-201ENST00000334634 NOD2Q9HC29 1040 aa13.22□□□□□ -0.29
TRIM46-201ENST00000334634 NBNO60934 754 aa13.21□□□□□ -0.29
TRIM46-201ENST00000334634 ENDOD1O94919 500 aa13.21□□□□□ -0.29
TRIM46-201ENST00000334634 GBP1P32455 592 aa13.21□□□□□ -0.29
TRIM46-201ENST00000334634 GMPRP36959 345 aa13.21□□□□□ -0.29
TRIM46-201ENST00000334634 MATKP42679 507 aa13.21□□□□□ -0.29
TRIM46-201ENST00000334634 COPS2P61201 443 aa13.21□□□□□ -0.29
TRIM46-201ENST00000334634 TAZQ16635 292 aa13.21□□□□□ -0.29
TRIM46-201ENST00000334634 SLC39A12Q504Y0 691 aa13.21□□□□□ -0.29
TRIM46-201ENST00000334634 PPP1R2P3Q6NXS1 205 aa13.21□□□□□ -0.29
TRIM46-201ENST00000334634 TRMT10CQ7L0Y3 403 aaKnown RBP13.21□□□□□ -0.29
TRIM46-201ENST00000334634 SPOCK2Q92563 424 aa13.21□□□□□ -0.29
TRIM46-201ENST00000334634 SPDL1Q96EA4 605 aa13.21□□□□□ -0.29
TRIM46-201ENST00000334634 AGAP3Q96P47 875 aa13.21□□□□□ -0.29
TRIM46-201ENST00000334634 STMN4Q9H169 189 aaPredicted RBP13.21□□□□□ -0.29
TRIM46-201ENST00000334634 HOMER3Q9NSC5 361 aa13.21□□□□□ -0.29
TRIM46-201ENST00000334634 DTLQ9NZJ0 730 aa13.21□□□□□ -0.29
TRIM46-201ENST00000334634 SCAMP3O14828 347 aaKnown RBP13.21□□□□□ -0.29
TRIM46-201ENST00000334634 ZBED1O96006 694 aa13.21□□□□□ -0.29
TRIM46-201ENST00000334634 MOCS2O96007 188 aaPredicted RBP13.21□□□□□ -0.29
TRIM46-201ENST00000334634 DEUP1Q05D60 604 aa13.21□□□□□ -0.29
TRIM46-201ENST00000334634 PKN2Q16513 984 aaKnown RBP13.21□□□□□ -0.29
TRIM46-201ENST00000334634 OVOS1Q6IE37 1185 aa13.21□□□□□ -0.29
TRIM46-201ENST00000334634 CES3Q6UWW8 571 aa13.21□□□□□ -0.29
TRIM46-201ENST00000334634 DENND5BQ6ZUT9 1274 aa13.21□□□□□ -0.29
TRIM46-201ENST00000334634 YTHDF3Q7Z739 585 aaKnown RBP13.21□□□□□ -0.29
TRIM46-201ENST00000334634 ZCCHC9Q8N567 271 aaKnown RBP13.21□□□□□ -0.29
TRIM46-201ENST00000334634 MICAL1Q8TDZ2 1067 aa13.21□□□□□ -0.29
TRIM46-201ENST00000334634 ATXN2LQ8WWM7 1075 aaKnown RBP13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms