RNA–Protein interactions for RNA: ENST00000334348.7

UPK3B-202, Transcript of uroplakin 3B, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene UPK3B, Length 2,373 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3B-202ENST00000334348 PADI4Q9UM07 663 aa16.78■□□□□ 0.28
UPK3B-202ENST00000334348 PCDHGB4Q9UN71 923 aa16.78■□□□□ 0.28
UPK3B-202ENST00000334348 PCDHGB5Q9Y5G0 923 aa16.78■□□□□ 0.28
UPK3B-202ENST00000334348 LOC100653049A0A140TA62 436 aa16.78■□□□□ 0.28
UPK3B-202ENST00000334348 KRT34O76011 436 aa16.78■□□□□ 0.28
UPK3B-202ENST00000334348 ASS1P00966 412 aaKnown RBP16.78■□□□□ 0.28
UPK3B-202ENST00000334348 SERPINE1P05121 402 aa16.78■□□□□ 0.28
UPK3B-202ENST00000334348 ATP6V1B1P15313 513 aa16.78■□□□□ 0.28
UPK3B-202ENST00000334348 MAGEA6P43360 314 aa16.78■□□□□ 0.28
UPK3B-202ENST00000334348 RPL10AP62906 217 aaKnown RBP16.78■□□□□ 0.28
UPK3B-202ENST00000334348 ADRM1Q16186 407 aa16.78■□□□□ 0.28
UPK3B-202ENST00000334348 PTPN20Q4JDL3 420 aa16.78■□□□□ 0.28
UPK3B-202ENST00000334348 ZNF394Q53GI3 561 aa16.78■□□□□ 0.28
UPK3B-202ENST00000334348 ZBTB41Q5SVQ8 909 aa16.78■□□□□ 0.28
UPK3B-202ENST00000334348 SCARA3Q6AZY7 606 aa16.78■□□□□ 0.28
UPK3B-202ENST00000334348 SLFN12LQ6IEE8 588 aa16.78■□□□□ 0.28
UPK3B-202ENST00000334348 RSPH3Q86UC2 560 aa16.78■□□□□ 0.28
UPK3B-202ENST00000334348 ZNF410Q86VK4 478 aa16.78■□□□□ 0.28
UPK3B-202ENST00000334348 GSDMBQ8TAX9 411 aa16.78■□□□□ 0.28
UPK3B-202ENST00000334348 SYTL5Q8TDW5 730 aaPredicted RBP16.78■□□□□ 0.28
UPK3B-202ENST00000334348 PPP4R1Q8TF05 950 aa16.78■□□□□ 0.28
UPK3B-202ENST00000334348 TFAP2BQ92481 460 aa16.78■□□□□ 0.28
UPK3B-202ENST00000334348 HSPH1Q92598 858 aa16.78■□□□□ 0.28
UPK3B-202ENST00000334348 RTP4Q96DX8 246 aa16.78■□□□□ 0.28
UPK3B-202ENST00000334348 RTKNQ9BST9 563 aa16.78■□□□□ 0.28
UPK3B-202ENST00000334348 POLR3FQ9H1D9 316 aaPredicted RBP16.78■□□□□ 0.28
UPK3B-202ENST00000334348 DBNDD1Q9H9R9 158 aa16.78■□□□□ 0.28
UPK3B-202ENST00000334348 IFT122Q9HBG6 1241 aa16.78■□□□□ 0.28
UPK3B-202ENST00000334348 EMCNQ9ULC0 261 aa16.78■□□□□ 0.28
UPK3B-202ENST00000334348 PCDHGA4Q9Y5G9 962 aa16.78■□□□□ 0.28
UPK3B-202ENST00000334348 PCDHA10Q9Y5I2 948 aa16.78■□□□□ 0.28
UPK3B-202ENST00000334348 H7C0C1 242 aa16.77■□□□□ 0.28
UPK3B-202ENST00000334348 ZNF195O14628 629 aa16.77■□□□□ 0.28
UPK3B-202ENST00000334348 TRMUO75648 421 aaKnown RBP16.77■□□□□ 0.28
UPK3B-202ENST00000334348 TRUB2O95900 331 aaKnown RBP16.77■□□□□ 0.28
UPK3B-202ENST00000334348 COX4I1P13073 169 aa16.77■□□□□ 0.28
UPK3B-202ENST00000334348 CNTFP26441 200 aa16.77■□□□□ 0.28
UPK3B-202ENST00000334348 PCSK6P29122 969 aa16.77■□□□□ 0.28
UPK3B-202ENST00000334348 MIPP30301 263 aa16.77■□□□□ 0.28
UPK3B-202ENST00000334348 SLC5A2P31639 672 aa16.77■□□□□ 0.28
UPK3B-202ENST00000334348 ATP5OP48047 213 aa16.77■□□□□ 0.28
UPK3B-202ENST00000334348 NR1H2P55055 460 aa16.77■□□□□ 0.28
UPK3B-202ENST00000334348 CC2D2BQ6DHV5 1058 aa16.77■□□□□ 0.28
UPK3B-202ENST00000334348 TRMT10BQ6PF06 316 aaKnown RBP16.77■□□□□ 0.28
UPK3B-202ENST00000334348 TICAM1Q8IUC6 712 aa16.77■□□□□ 0.28
UPK3B-202ENST00000334348 MAP7D3Q8IWC1 876 aa16.77■□□□□ 0.28
UPK3B-202ENST00000334348 NUP93Q8N1F7 819 aa16.77■□□□□ 0.28
UPK3B-202ENST00000334348 ACMSDQ8TDX5 336 aa16.77■□□□□ 0.28
UPK3B-202ENST00000334348 ZBTB45Q96K62 511 aaPredicted RBP16.77■□□□□ 0.28
UPK3B-202ENST00000334348 SORT1Q99523 831 aa16.77■□□□□ 0.28
UPK3B-202ENST00000334348 SDCBP2Q9H190 292 aa16.77■□□□□ 0.28
UPK3B-202ENST00000334348 CISHQ9NSE2 258 aa16.77■□□□□ 0.28
UPK3B-202ENST00000334348 PNPOQ9NVS9 261 aa16.77■□□□□ 0.28
UPK3B-202ENST00000334348 BTBD7Q9P203 1132 aa16.77■□□□□ 0.28
UPK3B-202ENST00000334348 GABBR1Q9UBS5 961 aa16.77■□□□□ 0.28
UPK3B-202ENST00000334348 STK39Q9UEW8 545 aa16.77■□□□□ 0.28
UPK3B-202ENST00000334348 ENDOD1O94919 500 aa16.77■□□□□ 0.27
UPK3B-202ENST00000334348 CST3P01034 146 aaPredicted RBP16.77■□□□□ 0.27
UPK3B-202ENST00000334348 PIGRP01833 764 aa16.77■□□□□ 0.27
UPK3B-202ENST00000334348 FAM58BPP0C7Q3 252 aa16.77■□□□□ 0.27
UPK3B-202ENST00000334348 EIF2AK2P19525 551 aaKnown RBP16.77■□□□□ 0.27
UPK3B-202ENST00000334348 NCF2P19878 526 aaPredicted RBP16.77■□□□□ 0.27
UPK3B-202ENST00000334348 GRK2P25098 689 aa16.77■□□□□ 0.27
UPK3B-202ENST00000334348 ZYXQ15942 572 aaKnown RBP16.77■□□□□ 0.27
UPK3B-202ENST00000334348 FAM47CQ5HY64 1035 aa16.77■□□□□ 0.27
UPK3B-202ENST00000334348 STRIP1Q5VSL9 837 aa16.77■□□□□ 0.27
UPK3B-202ENST00000334348 C16orf46Q6P387 395 aa16.77■□□□□ 0.27
UPK3B-202ENST00000334348 ZNF554Q86TJ5 538 aa16.77■□□□□ 0.27
UPK3B-202ENST00000334348 ADCY4Q8NFM4 1077 aa16.77■□□□□ 0.27
UPK3B-202ENST00000334348 CNBD2Q96M20 576 aa16.77■□□□□ 0.27
UPK3B-202ENST00000334348 LRGUKQ96M69 825 aa16.77■□□□□ 0.27
UPK3B-202ENST00000334348 PRPF18Q99633 342 aaKnown RBP16.77■□□□□ 0.27
UPK3B-202ENST00000334348 MRPL1Q9BYD6 325 aaKnown RBP16.77■□□□□ 0.27
UPK3B-202ENST00000334348 KLC2Q9H0B6 622 aa16.77■□□□□ 0.27
UPK3B-202ENST00000334348 APPL1Q9UKG1 709 aa16.77■□□□□ 0.27
UPK3B-202ENST00000334348 BLOC1S6Q9UL45 172 aa16.77■□□□□ 0.27
UPK3B-202ENST00000334348 COL4A5P29400 1685 aa16.76■□□□□ 0.27
UPK3B-202ENST00000334348 ATP6V1G1O75348 118 aa16.76■□□□□ 0.27
UPK3B-202ENST00000334348 ATG7O95352 703 aa16.76■□□□□ 0.27
UPK3B-202ENST00000334348 FAM163BP0C2L3 166 aa16.76■□□□□ 0.27
UPK3B-202ENST00000334348 GALK1P51570 392 aa16.76■□□□□ 0.27
UPK3B-202ENST00000334348 PSMC1P62191 440 aaKnown RBP16.76■□□□□ 0.27
UPK3B-202ENST00000334348 YWHAEP62258 255 aaKnown RBP16.76■□□□□ 0.27
UPK3B-202ENST00000334348 MMRN1Q13201 1228 aa16.76■□□□□ 0.27
UPK3B-202ENST00000334348 PEX6Q13608 980 aa16.76■□□□□ 0.27
UPK3B-202ENST00000334348 ADGRE1Q14246 886 aa16.76■□□□□ 0.27
UPK3B-202ENST00000334348 PGM5Q15124 567 aa16.76■□□□□ 0.27
UPK3B-202ENST00000334348 FSCBQ5H9T9 825 aa16.76■□□□□ 0.27
UPK3B-202ENST00000334348 DACT2Q5SW24 774 aa16.76■□□□□ 0.27
UPK3B-202ENST00000334348 N4BP2L1Q5TBK1 243 aaPredicted RBP16.76■□□□□ 0.27
UPK3B-202ENST00000334348 DENND1BQ6P3S1 775 aa16.76■□□□□ 0.27
UPK3B-202ENST00000334348 PHTF2Q8N3S3 785 aa16.76■□□□□ 0.27
UPK3B-202ENST00000334348 EMC1Q8N766 993 aa16.76■□□□□ 0.27
UPK3B-202ENST00000334348 MCUQ8NE86 351 aa16.76■□□□□ 0.27
UPK3B-202ENST00000334348 TAAR1Q96RJ0 339 aa16.76■□□□□ 0.27
UPK3B-202ENST00000334348 USP18Q9UMW8 372 aa16.76■□□□□ 0.27
UPK3B-202ENST00000334348 COL2A1P02458 1487 aaPredicted RBP16.76■□□□□ 0.27
UPK3B-202ENST00000334348 KCNN4O15554 427 aa16.75■□□□□ 0.27
UPK3B-202ENST00000334348 PLIN3O60664 434 aa16.75■□□□□ 0.27
UPK3B-202ENST00000334348 GLRA3O75311 464 aa16.75■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms