RNA–Protein interactions for RNA: ENST00000333188.9

COPB2-201, Transcript of coatomer protein complex subunit beta 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPB2, Length 3,360 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB2-201ENST00000333188 PPP1R36Q96LQ0 422 aa9.34□□□□□ -0.91
COPB2-201ENST00000333188 TGS1Q96RS0 853 aaKnown RBP9.34□□□□□ -0.91
COPB2-201ENST00000333188 SPON2Q9BUD6 331 aa9.34□□□□□ -0.91
COPB2-201ENST00000333188 EPN3Q9H201 632 aa9.34□□□□□ -0.91
COPB2-201ENST00000333188 ADAM7Q9H2U9 754 aa9.34□□□□□ -0.91
COPB2-201ENST00000333188 SLCO1B3Q9NPD5 702 aa9.34□□□□□ -0.91
COPB2-201ENST00000333188 SRRDQ9UH36 339 aa9.34□□□□□ -0.91
COPB2-201ENST00000333188 DDX20Q9UHI6 824 aaKnown RBP9.34□□□□□ -0.91
COPB2-201ENST00000333188 TSR3Q9UJK0 312 aaKnown RBP9.34□□□□□ -0.91
COPB2-201ENST00000333188 PRDM4Q9UKN5 801 aa9.34□□□□□ -0.91
COPB2-201ENST00000333188 STK38LQ9Y2H1 464 aa9.34□□□□□ -0.91
COPB2-201ENST00000333188 MYO1CO00159 1063 aa9.34□□□□□ -0.91
COPB2-201ENST00000333188 DDHD2O94830 711 aa9.34□□□□□ -0.91
COPB2-201ENST00000333188 TOP3BO95985 862 aaKnown RBP9.34□□□□□ -0.91
COPB2-201ENST00000333188 LTFP02788 710 aa9.34□□□□□ -0.91
COPB2-201ENST00000333188 CKBP12277 381 aa9.34□□□□□ -0.91
COPB2-201ENST00000333188 ERCC2P18074 760 aa9.34□□□□□ -0.91
COPB2-201ENST00000333188 SP100P23497 879 aaPredicted RBP9.34□□□□□ -0.91
COPB2-201ENST00000333188 AXLP30530 894 aa9.34□□□□□ -0.91
COPB2-201ENST00000333188 PGFP49763 221 aa9.34□□□□□ -0.91
COPB2-201ENST00000333188 PDE1BQ01064 536 aa9.34□□□□□ -0.91
COPB2-201ENST00000333188 STILQ15468 1287 aa9.34□□□□□ -0.91
COPB2-201ENST00000333188 LRIG3Q6UXM1 1119 aa9.34□□□□□ -0.91
COPB2-201ENST00000333188 MICALCLQ6ZW33 695 aa9.34□□□□□ -0.91
COPB2-201ENST00000333188 CIR1Q86X95 450 aaPredicted RBP9.34□□□□□ -0.91
COPB2-201ENST00000333188 SLC25A41Q8N5S1 370 aa9.34□□□□□ -0.91
COPB2-201ENST00000333188 TMEM174Q8WUU8 243 aa9.34□□□□□ -0.91
COPB2-201ENST00000333188 AUTS2Q8WXX7 1259 aa9.34□□□□□ -0.91
COPB2-201ENST00000333188 OR12D3Q9UGF7 316 aa9.34□□□□□ -0.91
COPB2-201ENST00000333188 VANGL2Q9ULK5 521 aa9.34□□□□□ -0.91
COPB2-201ENST00000333188 PCDHB7Q9Y5E2 793 aa9.34□□□□□ -0.91
COPB2-201ENST00000333188 BUD23O43709 281 aaKnown RBP9.33□□□□□ -0.92
COPB2-201ENST00000333188 PSMB4P28070 264 aa9.33□□□□□ -0.92
COPB2-201ENST00000333188 GBP1P32455 592 aa9.33□□□□□ -0.92
COPB2-201ENST00000333188 MATKP42679 507 aa9.33□□□□□ -0.92
COPB2-201ENST00000333188 CYP1B1Q16678 543 aa9.33□□□□□ -0.92
COPB2-201ENST00000333188 PRSS55Q6UWB4 352 aaPredicted RBP9.33□□□□□ -0.92
COPB2-201ENST00000333188 SERINC5Q86VE9 423 aa9.33□□□□□ -0.92
COPB2-201ENST00000333188 UNC93AQ86WB7 457 aa9.33□□□□□ -0.92
COPB2-201ENST00000333188 MREGQ8N565 214 aa9.33□□□□□ -0.92
COPB2-201ENST00000333188 COLGALT1Q8NBJ5 622 aa9.33□□□□□ -0.92
COPB2-201ENST00000333188 PAFAH2Q99487 392 aa9.33□□□□□ -0.92
COPB2-201ENST00000333188 FERMT1Q9BQL6 677 aa9.33□□□□□ -0.92
COPB2-201ENST00000333188 POPDC2Q9HBU9 364 aa9.33□□□□□ -0.92
COPB2-201ENST00000333188 PCDH9Q9HC56 1237 aa9.33□□□□□ -0.92
COPB2-201ENST00000333188 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP9.33□□□□□ -0.92
COPB2-201ENST00000333188 WDR27A2RRH5 827 aa9.33□□□□□ -0.92
COPB2-201ENST00000333188 RNF103O00237 685 aa9.33□□□□□ -0.92
COPB2-201ENST00000333188 B4GALT3O60512 393 aa9.33□□□□□ -0.92
COPB2-201ENST00000333188 CDH16O75309 829 aa9.33□□□□□ -0.92
COPB2-201ENST00000333188 STK10O94804 968 aaKnown RBP9.33□□□□□ -0.92
COPB2-201ENST00000333188 AMHP03971 560 aa9.33□□□□□ -0.92
COPB2-201ENST00000333188 PHBP35232 272 aa9.33□□□□□ -0.92
COPB2-201ENST00000333188 MAXP61244 160 aa9.33□□□□□ -0.92
COPB2-201ENST00000333188 ZBTB6Q15916 424 aa9.33□□□□□ -0.92
COPB2-201ENST00000333188 C10orf120Q5SQS8 335 aa9.33□□□□□ -0.92
COPB2-201ENST00000333188 TMEM110Q86TL2 294 aa9.33□□□□□ -0.92
COPB2-201ENST00000333188 PQLC3Q8N755 202 aa9.33□□□□□ -0.92
COPB2-201ENST00000333188 IPMKQ8NFU5 416 aa9.33□□□□□ -0.92
COPB2-201ENST00000333188 PDCD6IPQ8WUM4 868 aaKnown RBP9.33□□□□□ -0.92
COPB2-201ENST00000333188 TFB1MQ8WVM0 346 aaKnown RBP9.33□□□□□ -0.92
COPB2-201ENST00000333188 CHMP6Q96FZ7 201 aa9.33□□□□□ -0.92
COPB2-201ENST00000333188 UNC93B1Q9H1C4 597 aa9.33□□□□□ -0.92
COPB2-201ENST00000333188 G3BP2Q9UN86 482 aaKnown RBP9.33□□□□□ -0.92
COPB2-201ENST00000333188 HAS3O00219 553 aa9.33□□□□□ -0.92
COPB2-201ENST00000333188 SETSIPP0DME0 302 aa9.33□□□□□ -0.92
COPB2-201ENST00000333188 KLRC2P26717 231 aa9.33□□□□□ -0.92
COPB2-201ENST00000333188 RPA3P35244 121 aaPredicted RBP9.33□□□□□ -0.92
COPB2-201ENST00000333188 LHX1P48742 406 aa9.33□□□□□ -0.92
COPB2-201ENST00000333188 VEGFBP49765 207 aa9.33□□□□□ -0.92
COPB2-201ENST00000333188 ZBTB16Q05516 673 aa9.33□□□□□ -0.92
COPB2-201ENST00000333188 DUSP4Q13115 394 aa9.33□□□□□ -0.92
COPB2-201ENST00000333188 MPP2Q14168 576 aa9.33□□□□□ -0.92
COPB2-201ENST00000333188 OASLQ15646 514 aaKnown RBP9.33□□□□□ -0.92
COPB2-201ENST00000333188 ARL13BQ3SXY8 428 aa9.33□□□□□ -0.92
COPB2-201ENST00000333188 HIBCHQ6NVY1 386 aaPredicted RBP9.33□□□□□ -0.92
COPB2-201ENST00000333188 ZNF449Q6P9G9 518 aa9.33□□□□□ -0.92
COPB2-201ENST00000333188 TRMT10BQ6PF06 316 aaKnown RBP9.33□□□□□ -0.92
COPB2-201ENST00000333188 PRPF39Q86UA1 669 aaKnown RBP9.33□□□□□ -0.92
COPB2-201ENST00000333188 NT5DC4Q86YG4 428 aa9.33□□□□□ -0.92
COPB2-201ENST00000333188 IFNLR1Q8IU57 520 aaPredicted RBP9.33□□□□□ -0.92
COPB2-201ENST00000333188 CFAP52Q8N1V2 620 aa9.33□□□□□ -0.92
COPB2-201ENST00000333188 ATP11CQ8NB49 1132 aa9.33□□□□□ -0.92
COPB2-201ENST00000333188 CMASQ8NFW8 434 aaPredicted RBP9.33□□□□□ -0.92
COPB2-201ENST00000333188 URGCPQ8TCY9 931 aa9.33□□□□□ -0.92
COPB2-201ENST00000333188 ZNF512Q96ME7 567 aaPredicted RBP9.33□□□□□ -0.92
COPB2-201ENST00000333188 SLC4A5Q9BY07 1137 aa9.33□□□□□ -0.92
COPB2-201ENST00000333188 PCMTD2Q9NV79 361 aa9.33□□□□□ -0.92
COPB2-201ENST00000333188 PTPRFP10586 1907 aa9.33□□□□□ -0.92
COPB2-201ENST00000333188 LOC102724159A0A0B4J2E5 919 aa9.32□□□□□ -0.92
COPB2-201ENST00000333188 A0A0G2JND7 137 aa9.32□□□□□ -0.92
COPB2-201ENST00000333188 TCRBV5S1A1TA0A578 114 aa9.32□□□□□ -0.92
COPB2-201ENST00000333188 H3BRJ5 948 aa9.32□□□□□ -0.92
COPB2-201ENST00000333188 MGAT1P26572 445 aa9.32□□□□□ -0.92
COPB2-201ENST00000333188 L1CAMP32004 1257 aa9.32□□□□□ -0.92
COPB2-201ENST00000333188 CXCR3P49682 368 aa9.32□□□□□ -0.92
COPB2-201ENST00000333188 DRG2P55039 364 aaKnown RBP9.32□□□□□ -0.92
COPB2-201ENST00000333188 FAAP100Q0VG06 881 aa9.32□□□□□ -0.92
COPB2-201ENST00000333188 PTK7Q13308 1070 aa9.32□□□□□ -0.92
COPB2-201ENST00000333188 PWP2Q15269 919 aaKnown RBP9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms