RNA–Protein interactions for RNA: ENST00000331479.3

SMDT1-201, Transcript of single-pass membrane protein with aspartate rich tail 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMDT1, Length 1,567 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMDT1-201ENST00000331479 BDP1A6H8Y1 2624 aa27.02■■□□□ 1.92
SMDT1-201ENST00000331479 TTC28Q96AY4 2481 aa27.02■■□□□ 1.92
SMDT1-201ENST00000331479 LCA5LO95447 670 aa27.01■■□□□ 1.92
SMDT1-201ENST00000331479 ARSAP15289 507 aa27.01■■□□□ 1.92
SMDT1-201ENST00000331479 ATXN1P54253 815 aaKnown RBP27.01■■□□□ 1.92
SMDT1-201ENST00000331479 RING1Q06587 406 aa27.01■■□□□ 1.92
SMDT1-201ENST00000331479 C15orf59Q2T9L4 293 aaPredicted RBP27.01■■□□□ 1.92
SMDT1-201ENST00000331479 EML3Q32P44 896 aa27.01■■□□□ 1.92
SMDT1-201ENST00000331479 SH3PXD2AQ5TCZ1 1133 aa27.01■■□□□ 1.92
SMDT1-201ENST00000331479 BNIPLQ7Z465 357 aa27.01■■□□□ 1.92
SMDT1-201ENST00000331479 DENND1CQ8IV53 801 aa27.01■■□□□ 1.92
SMDT1-201ENST00000331479 SLC2A4RGQ9NR83 387 aa27.01■■□□□ 1.92
SMDT1-201ENST00000331479 PIGVQ9NUD9 493 aa27.01■■□□□ 1.92
SMDT1-201ENST00000331479 LSM7Q9UK45 103 aaKnown RBP27.01■■□□□ 1.92
SMDT1-201ENST00000331479 AGO1Q9UL18 857 aaKnown RBP27.01■■□□□ 1.92
SMDT1-201ENST00000331479 NCOR1O75376 2440 aa27.01■■□□□ 1.91
SMDT1-201ENST00000331479 CYP1A2P05177 515 aa27.01■■□□□ 1.91
SMDT1-201ENST00000331479 H2AFZP0C0S5 128 aa27.01■■□□□ 1.91
SMDT1-201ENST00000331479 GPD1P21695 349 aa27.01■■□□□ 1.91
SMDT1-201ENST00000331479 IFNAR2P48551 515 aa27.01■■□□□ 1.91
SMDT1-201ENST00000331479 ATP11AP98196 1134 aa27.01■■□□□ 1.91
SMDT1-201ENST00000331479 OGDHQ02218 1023 aa27.01■■□□□ 1.91
SMDT1-201ENST00000331479 RAB6CQ53S08 254 aa27.01■■□□□ 1.91
SMDT1-201ENST00000331479 ZC3H12AQ5D1E8 599 aaKnown RBP27.01■■□□□ 1.91
SMDT1-201ENST00000331479 IER5LQ5T953 404 aa27.01■■□□□ 1.91
SMDT1-201ENST00000331479 H2AFVQ71UI9 128 aa27.01■■□□□ 1.91
SMDT1-201ENST00000331479 KIAA1958Q8N8K9 716 aa27.01■■□□□ 1.91
SMDT1-201ENST00000331479 IRF7Q92985 503 aa27.01■■□□□ 1.91
SMDT1-201ENST00000331479 PGAP3Q96FM1 320 aaPredicted RBP27.01■■□□□ 1.91
SMDT1-201ENST00000331479 COL25A1Q9BXS0 654 aaPredicted RBP27.01■■□□□ 1.91
SMDT1-201ENST00000331479 RAB6CQ9H0N0 254 aa27.01■■□□□ 1.91
SMDT1-201ENST00000331479 GTSE1Q9NYZ3 720 aa27.01■■□□□ 1.91
SMDT1-201ENST00000331479 EPN1Q9Y6I3 576 aaPredicted RBP27.01■■□□□ 1.91
SMDT1-201ENST00000331479 SCINQ9Y6U3 715 aa27.01■■□□□ 1.91
SMDT1-201ENST00000331479 TMEM191CA6NGB0 347 aa27■■□□□ 1.91
SMDT1-201ENST00000331479 OTOL1A6NHN0 477 aaPredicted RBP27■■□□□ 1.91
SMDT1-201ENST00000331479 NDUFA10O95299 355 aa27■■□□□ 1.91
SMDT1-201ENST00000331479 SDC4P31431 198 aa27■■□□□ 1.91
SMDT1-201ENST00000331479 GBP1P32455 592 aa27■■□□□ 1.91
SMDT1-201ENST00000331479 CYLC1P35663 651 aaPredicted RBP27■■□□□ 1.91
SMDT1-201ENST00000331479 HARS2P49590 506 aaKnown RBP27■■□□□ 1.91
SMDT1-201ENST00000331479 CDO1Q16878 200 aa27■■□□□ 1.91
SMDT1-201ENST00000331479 ADGRG2Q8IZP9 1017 aa27■■□□□ 1.91
SMDT1-201ENST00000331479 TTC8Q8TAM2 541 aa27■■□□□ 1.91
SMDT1-201ENST00000331479 TICRRQ7Z2Z1 1910 aa26.99■■□□□ 1.91
SMDT1-201ENST00000331479 PTPN9P43378 593 aa26.99■■□□□ 1.91
SMDT1-201ENST00000331479 DEUP1Q05D60 604 aa26.99■■□□□ 1.91
SMDT1-201ENST00000331479 PDGFRLQ15198 375 aa26.99■■□□□ 1.91
SMDT1-201ENST00000331479 DCLK3Q9C098 648 aa26.99■■□□□ 1.91
SMDT1-201ENST00000331479 MRPL47Q9HD33 250 aaKnown RBP26.99■■□□□ 1.91
SMDT1-201ENST00000331479 TBC1D14Q9P2M4 693 aa26.99■■□□□ 1.91
SMDT1-201ENST00000331479 EIF3CLB5ME19 914 aaKnown RBP26.98■■□□□ 1.91
SMDT1-201ENST00000331479 SLC9A3R1O14745 358 aaPredicted RBP26.98■■□□□ 1.91
SMDT1-201ENST00000331479 ZNF143P52747 638 aaPredicted RBP26.98■■□□□ 1.91
SMDT1-201ENST00000331479 ZXDAP98168 799 aa26.98■■□□□ 1.91
SMDT1-201ENST00000331479 NUGGCQ68CJ6 796 aa26.98■■□□□ 1.91
SMDT1-201ENST00000331479 UNC45BQ8IWX7 931 aa26.98■■□□□ 1.91
SMDT1-201ENST00000331479 UBALD2Q8IYN6 164 aa26.98■■□□□ 1.91
SMDT1-201ENST00000331479 CTNNBL1Q8WYA6 563 aaPredicted RBP26.98■■□□□ 1.91
SMDT1-201ENST00000331479 EIF3CQ99613 913 aaKnown RBP26.98■■□□□ 1.91
SMDT1-201ENST00000331479 NUP85Q9BW27 656 aa26.98■■□□□ 1.91
SMDT1-201ENST00000331479 XPO7Q9UIA9 1087 aaKnown RBP26.98■■□□□ 1.91
SMDT1-201ENST00000331479 COL4A2P08572 1712 aa26.98■■□□□ 1.91
SMDT1-201ENST00000331479 ENDOD1O94919 500 aa26.97■■□□□ 1.91
SMDT1-201ENST00000331479 TMEM253P0C7T8 217 aa26.97■■□□□ 1.91
SMDT1-201ENST00000331479 RUNX3Q13761 415 aa26.97■■□□□ 1.91
SMDT1-201ENST00000331479 LRRC8AQ8IWT6 810 aa26.97■■□□□ 1.91
SMDT1-201ENST00000331479 CENPIQ92674 756 aaPredicted RBP26.97■■□□□ 1.91
SMDT1-201ENST00000331479 ANP32BQ92688 251 aaKnown RBP26.97■■□□□ 1.91
SMDT1-201ENST00000331479 TRPV5Q9NQA5 729 aa26.97■■□□□ 1.91
SMDT1-201ENST00000331479 SLTMQ9NWH9 1034 aaKnown RBP eCLIP26.97■■□□□ 1.91
SMDT1-201ENST00000331479 KCNU1A8MYU2 1149 aa26.97■■□□□ 1.91
SMDT1-201ENST00000331479 CCP110O43303 1012 aa26.97■■□□□ 1.91
SMDT1-201ENST00000331479 MOCS2O96007 188 aaPredicted RBP26.97■■□□□ 1.91
SMDT1-201ENST00000331479 CCR1P32246 355 aa26.97■■□□□ 1.91
SMDT1-201ENST00000331479 RDXP35241 583 aaKnown RBP26.97■■□□□ 1.91
SMDT1-201ENST00000331479 MAGEA1P43355 309 aa26.97■■□□□ 1.91
SMDT1-201ENST00000331479 CXCR3P49682 368 aa26.97■■□□□ 1.91
SMDT1-201ENST00000331479 ZNF252P-AS1Q0IIN9 211 aa26.97■■□□□ 1.91
SMDT1-201ENST00000331479 C10orf76Q5T2E6 689 aa26.97■■□□□ 1.91
SMDT1-201ENST00000331479 DNASE1L2Q92874 299 aa26.97■■□□□ 1.91
SMDT1-201ENST00000331479 ATP2A3Q93084 1043 aa26.97■■□□□ 1.91
SMDT1-201ENST00000331479 RNF34Q969K3 372 aa26.97■■□□□ 1.91
SMDT1-201ENST00000331479 OTUB2Q96DC9 234 aa26.97■■□□□ 1.91
SMDT1-201ENST00000331479 CNPY3Q9BT09 278 aa26.97■■□□□ 1.91
SMDT1-201ENST00000331479 ECT2Q9H8V3 914 aa26.97■■□□□ 1.91
SMDT1-201ENST00000331479 ANLNQ9NQW6 1124 aa26.97■■□□□ 1.91
SMDT1-201ENST00000331479 HEBP1Q9NRV9 189 aa26.97■■□□□ 1.91
SMDT1-201ENST00000331479 TFR2Q9UP52 801 aa26.97■■□□□ 1.91
SMDT1-201ENST00000331479 ZNF510Q9Y2H8 683 aa26.97■■□□□ 1.91
SMDT1-201ENST00000331479 REXO2Q9Y3B8 237 aaKnown RBP26.97■■□□□ 1.91
SMDT1-201ENST00000331479 PCDHA13Q9Y5I0 950 aa26.97■■□□□ 1.91
SMDT1-201ENST00000331479 DCXO43602 365 aa26.96■■□□□ 1.91
SMDT1-201ENST00000331479 F9P00740 461 aa26.96■■□□□ 1.91
SMDT1-201ENST00000331479 VCPP55072 806 aaKnown RBP26.96■■□□□ 1.91
SMDT1-201ENST00000331479 HDAC4P56524 1084 aa26.96■■□□□ 1.91
SMDT1-201ENST00000331479 PFKPQ01813 784 aa26.96■■□□□ 1.91
SMDT1-201ENST00000331479 SPA17Q15506 151 aa26.96■■□□□ 1.91
SMDT1-201ENST00000331479 RHBDF2Q6PJF5 856 aa26.96■■□□□ 1.91
SMDT1-201ENST00000331479 CSGALNACT1Q8TDX6 532 aa26.96■■□□□ 1.91
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms