RNA–Protein interactions for RNA: ENST00000331222.5

CLN8-201, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLN8, Length 7,169 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-201ENST00000331222 TRPC5OSA6NMA1 111 aa10.84□□□□□ -0.67
CLN8-201ENST00000331222 CRTAMO95727 393 aa10.84□□□□□ -0.67
CLN8-201ENST00000331222 AGTP01019 485 aa10.84□□□□□ -0.67
CLN8-201ENST00000331222 CYP2C8P10632 490 aa10.84□□□□□ -0.67
CLN8-201ENST00000331222 BDNFP23560 247 aa10.84□□□□□ -0.67
CLN8-201ENST00000331222 DYNC1I2Q13409 638 aaKnown RBP10.84□□□□□ -0.67
CLN8-201ENST00000331222 INSCQ1MX18 579 aa10.84□□□□□ -0.67
CLN8-201ENST00000331222 PLA2G4EQ3MJ16 856 aa10.84□□□□□ -0.67
CLN8-201ENST00000331222 COLGALT2Q8IYK4 626 aa10.84□□□□□ -0.67
CLN8-201ENST00000331222 LGI2Q8N0V4 545 aa10.84□□□□□ -0.67
CLN8-201ENST00000331222 RGS18Q9NS28 235 aa10.84□□□□□ -0.67
CLN8-201ENST00000331222 RBM22Q9NW64 420 aaKnown RBP eCLIP10.84□□□□□ -0.67
CLN8-201ENST00000331222 SPHKAPQ2M3C7 1700 aa10.84□□□□□ -0.67
CLN8-201ENST00000331222 PLEKHG2Q9H7P9 1386 aa10.84□□□□□ -0.67
CLN8-201ENST00000331222 ADM5C9JUS6 153 aa10.83□□□□□ -0.68
CLN8-201ENST00000331222 SRGNP10124 158 aa10.83□□□□□ -0.68
CLN8-201ENST00000331222 ANXA11P50995 505 aaKnown RBP10.83□□□□□ -0.68
CLN8-201ENST00000331222 PDIA5Q14554 519 aa10.83□□□□□ -0.68
CLN8-201ENST00000331222 TIGD7Q6NT04 549 aaPredicted RBP10.83□□□□□ -0.68
CLN8-201ENST00000331222 CHST13Q8NET6 341 aa10.83□□□□□ -0.68
CLN8-201ENST00000331222 GPR152Q8TDT2 470 aa10.83□□□□□ -0.68
CLN8-201ENST00000331222 LRRN4Q8WUT4 740 aa10.83□□□□□ -0.68
CLN8-201ENST00000331222 CBWD1Q9BRT8 395 aa10.83□□□□□ -0.68
CLN8-201ENST00000331222 C6orf62Q9GZU0 229 aaPredicted RBP10.83□□□□□ -0.68
CLN8-201ENST00000331222 VANGL2Q9ULK5 521 aa10.83□□□□□ -0.68
CLN8-201ENST00000331222 ANO9A1A5B4 782 aa10.83□□□□□ -0.68
CLN8-201ENST00000331222 CDH16O75309 829 aa10.83□□□□□ -0.68
CLN8-201ENST00000331222 RASA1P20936 1047 aa10.83□□□□□ -0.68
CLN8-201ENST00000331222 HOXA7P31268 230 aaPredicted RBP10.83□□□□□ -0.68
CLN8-201ENST00000331222 PNPLA4P41247 253 aa10.83□□□□□ -0.68
CLN8-201ENST00000331222 SERPINB8P50452 374 aa10.83□□□□□ -0.68
CLN8-201ENST00000331222 MYL6P60660 151 aa10.83□□□□□ -0.68
CLN8-201ENST00000331222 BMPR2Q13873 1038 aa10.83□□□□□ -0.68
CLN8-201ENST00000331222 EDRF1Q3B7T1 1238 aa10.83□□□□□ -0.68
CLN8-201ENST00000331222 POTEAQ6S8J7 498 aa10.83□□□□□ -0.68
CLN8-201ENST00000331222 CDK20Q8IZL9 346 aa10.83□□□□□ -0.68
CLN8-201ENST00000331222 OR10G6Q8NH81 332 aa10.83□□□□□ -0.68
CLN8-201ENST00000331222 RAB23Q9ULC3 237 aa10.83□□□□□ -0.68
CLN8-201ENST00000331222 DNAJC16Q9Y2G8 782 aa10.83□□□□□ -0.68
CLN8-201ENST00000331222 SAC3D1A6NKF1 404 aa10.83□□□□□ -0.68
CLN8-201ENST00000331222 SMIM22K7EJ46 135 aa10.83□□□□□ -0.68
CLN8-201ENST00000331222 AP3D1O14617 1153 aa10.83□□□□□ -0.68
CLN8-201ENST00000331222 TMED10P49755 219 aaKnown RBP10.83□□□□□ -0.68
CLN8-201ENST00000331222 CCL23P55773 120 aa10.83□□□□□ -0.68
CLN8-201ENST00000331222 CHRNB3Q05901 458 aa10.83□□□□□ -0.68
CLN8-201ENST00000331222 LAMTOR4Q0VGL1 99 aa10.83□□□□□ -0.68
CLN8-201ENST00000331222 DAB2IPQ5VWQ8 1189 aa10.83□□□□□ -0.68
CLN8-201ENST00000331222 ILDR2Q71H61 639 aa10.83□□□□□ -0.68
CLN8-201ENST00000331222 FRMD6Q96NE9 622 aa10.83□□□□□ -0.68
CLN8-201ENST00000331222 SNCAIPQ9Y6H5 919 aa10.83□□□□□ -0.68
CLN8-201ENST00000331222 HECW2Q9P2P5 1572 aa10.83□□□□□ -0.68
CLN8-201ENST00000331222 PSMD11O00231 422 aa10.83□□□□□ -0.68
CLN8-201ENST00000331222 FOXN3O00409 490 aaPredicted RBP10.83□□□□□ -0.68
CLN8-201ENST00000331222 CALCAP01258 141 aa10.83□□□□□ -0.68
CLN8-201ENST00000331222 PSMB9P28065 219 aa10.83□□□□□ -0.68
CLN8-201ENST00000331222 TUBP50607 506 aa10.83□□□□□ -0.68
CLN8-201ENST00000331222 ZNF621Q6ZSS3 439 aa10.83□□□□□ -0.68
CLN8-201ENST00000331222 ATG9AQ7Z3C6 839 aa10.83□□□□□ -0.68
CLN8-201ENST00000331222 IQCF2Q8IXL9 164 aa10.83□□□□□ -0.68
CLN8-201ENST00000331222 SPATA20Q8TB22 786 aa10.83□□□□□ -0.68
CLN8-201ENST00000331222 SYTL5Q8TDW5 730 aaPredicted RBP10.83□□□□□ -0.68
CLN8-201ENST00000331222 S100A13Q99584 98 aa10.83□□□□□ -0.68
CLN8-201ENST00000331222 APBA2Q99767 749 aa10.83□□□□□ -0.68
CLN8-201ENST00000331222 NLNQ9BYT8 704 aa10.83□□□□□ -0.68
CLN8-201ENST00000331222 ZCCHC8Q6NZY4 707 aaKnown RBP10.83□□□□□ -0.68
CLN8-201ENST00000331222 FAM151AQ8WW52 585 aa10.83□□□□□ -0.68
CLN8-201ENST00000331222 AGPAT3Q9NRZ7 376 aa10.83□□□□□ -0.68
CLN8-201ENST00000331222 FAM153AQ9UHL3 310 aa10.83□□□□□ -0.68
CLN8-201ENST00000331222 CROCC2H7BZ55 1655 aa10.83□□□□□ -0.68
CLN8-201ENST00000331222 PREX2Q70Z35 1606 aa10.83□□□□□ -0.68
CLN8-201ENST00000331222 CRB1P82279 1406 aa10.83□□□□□ -0.68
CLN8-201ENST00000331222 PTGES3LE9PB15 166 aa10.83□□□□□ -0.68
CLN8-201ENST00000331222 MICAL2O94851 1124 aa10.83□□□□□ -0.68
CLN8-201ENST00000331222 FGRP09769 529 aa10.83□□□□□ -0.68
CLN8-201ENST00000331222 SLC2A3P11169 496 aa10.83□□□□□ -0.68
CLN8-201ENST00000331222 EPORP19235 508 aa10.83□□□□□ -0.68
CLN8-201ENST00000331222 PON1P27169 355 aa10.83□□□□□ -0.68
CLN8-201ENST00000331222 FAM20CQ8IXL6 584 aa10.83□□□□□ -0.68
CLN8-201ENST00000331222 RNF148Q8N7C7 305 aa10.83□□□□□ -0.68
CLN8-201ENST00000331222 CORO1BQ9BR76 489 aa10.83□□□□□ -0.68
CLN8-201ENST00000331222 ZNF112Q9UJU3 913 aa10.83□□□□□ -0.68
CLN8-201ENST00000331222 WDR27A2RRH5 827 aa10.82□□□□□ -0.68
CLN8-201ENST00000331222 SEC22BO75396 215 aa10.82□□□□□ -0.68
CLN8-201ENST00000331222 MED24O75448 989 aa10.82□□□□□ -0.68
CLN8-201ENST00000331222 TYMPP19971 482 aa10.82□□□□□ -0.68
CLN8-201ENST00000331222 BGNP21810 368 aa10.82□□□□□ -0.68
CLN8-201ENST00000331222 IRX1P78414 480 aaPredicted RBP10.82□□□□□ -0.68
CLN8-201ENST00000331222 RAPSNQ13702 412 aa10.82□□□□□ -0.68
CLN8-201ENST00000331222 ITIH5Q86UX2 942 aa10.82□□□□□ -0.68
CLN8-201ENST00000331222 PPP1R2P1Q96PQ5 205 aa10.82□□□□□ -0.68
CLN8-201ENST00000331222 ISCA1Q9BUE6 129 aa10.82□□□□□ -0.68
CLN8-201ENST00000331222 VPS45Q9NRW7 570 aa10.82□□□□□ -0.68
CLN8-201ENST00000331222 PHTF1Q9UMS5 762 aa10.82□□□□□ -0.68
CLN8-201ENST00000331222 LOC102724159A0A0B4J2E5 919 aa10.82□□□□□ -0.68
CLN8-201ENST00000331222 EIF3DO15371 548 aaKnown RBP eCLIP10.82□□□□□ -0.68
CLN8-201ENST00000331222 POLR2EP19388 210 aaKnown RBP10.82□□□□□ -0.68
CLN8-201ENST00000331222 ITGALP20701 1170 aa10.82□□□□□ -0.68
CLN8-201ENST00000331222 MAPKAPK2P49137 400 aa10.82□□□□□ -0.68
CLN8-201ENST00000331222 PWP2Q15269 919 aaKnown RBP10.82□□□□□ -0.68
CLN8-201ENST00000331222 ATAD3BQ5T9A4 648 aa10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms