RNA–Protein interactions for RNA: ENST00000331194.8

CCDC88C-201, Transcript of coiled-coil domain containing 88C, humanhuman

TSL 5 BASIC

Gene CCDC88C, Length 3,104 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC88C-201ENST00000331194 OR5B17Q8NGF7 314 aa13.88□□□□□ -0.19
CCDC88C-201ENST00000331194 GIPC3Q8TF64 312 aa13.88□□□□□ -0.19
CCDC88C-201ENST00000331194 C17orf50Q8WW18 174 aa13.88□□□□□ -0.19
CCDC88C-201ENST00000331194 VCPIP1Q96JH7 1222 aa13.88□□□□□ -0.19
CCDC88C-201ENST00000331194 ZFRQ96KR1 1074 aaKnown RBP13.88□□□□□ -0.19
CCDC88C-201ENST00000331194 SEMA6AQ9H2E6 1030 aa13.88□□□□□ -0.19
CCDC88C-201ENST00000331194 ZNF358Q9NW07 568 aa13.88□□□□□ -0.19
CCDC88C-201ENST00000331194 EMCNQ9ULC0 261 aa13.88□□□□□ -0.19
CCDC88C-201ENST00000331194 CLEC11AQ9Y240 323 aa13.88□□□□□ -0.19
CCDC88C-201ENST00000331194 GOLGA8QA0A0J9YX86 632 aa13.88□□□□□ -0.19
CCDC88C-201ENST00000331194 TCRBV5S1A1TA0A578 114 aa13.88□□□□□ -0.19
CCDC88C-201ENST00000331194 GOLGA8OA6NCC3 632 aa13.88□□□□□ -0.19
CCDC88C-201ENST00000331194 GOLGA8NF8WBI6 632 aa13.88□□□□□ -0.19
CCDC88C-201ENST00000331194 APRTP07741 180 aa13.88□□□□□ -0.19
CCDC88C-201ENST00000331194 COX4I1P13073 169 aa13.88□□□□□ -0.19
CCDC88C-201ENST00000331194 GRIA1P42261 906 aa13.88□□□□□ -0.19
CCDC88C-201ENST00000331194 THOP1P52888 689 aa13.88□□□□□ -0.19
CCDC88C-201ENST00000331194 SLC10A2Q12908 348 aaPredicted RBP13.88□□□□□ -0.19
CCDC88C-201ENST00000331194 DMP1Q13316 513 aaPredicted RBP13.88□□□□□ -0.19
CCDC88C-201ENST00000331194 AOC3Q16853 763 aa13.88□□□□□ -0.19
CCDC88C-201ENST00000331194 ZACNQ401N2 412 aa13.88□□□□□ -0.19
CCDC88C-201ENST00000331194 N4BP2L1Q5TBK1 243 aaPredicted RBP13.88□□□□□ -0.19
CCDC88C-201ENST00000331194 NCCRP1Q6ZVX7 275 aaPredicted RBP13.88□□□□□ -0.19
CCDC88C-201ENST00000331194 C10orf107Q8IVU9 208 aa13.88□□□□□ -0.19
CCDC88C-201ENST00000331194 TRIML2Q8N7C3 387 aa13.88□□□□□ -0.19
CCDC88C-201ENST00000331194 SMYD1Q8NB12 490 aa13.88□□□□□ -0.19
CCDC88C-201ENST00000331194 KCTD6Q8NC69 237 aa13.88□□□□□ -0.19
CCDC88C-201ENST00000331194 RNF169Q8NCN4 708 aa13.88□□□□□ -0.19
CCDC88C-201ENST00000331194 TMEM174Q8WUU8 243 aa13.88□□□□□ -0.19
CCDC88C-201ENST00000331194 GMCL1Q96IK5 515 aa13.88□□□□□ -0.19
CCDC88C-201ENST00000331194 LENG8Q96PV6 779 aaPredicted RBP13.88□□□□□ -0.19
CCDC88C-201ENST00000331194 CCT7Q99832 543 aa13.88□□□□□ -0.19
CCDC88C-201ENST00000331194 ANLNQ9NQW6 1124 aa13.88□□□□□ -0.19
CCDC88C-201ENST00000331194 BARX2Q9UMQ3 279 aaPredicted RBP13.88□□□□□ -0.19
CCDC88C-201ENST00000331194 EXOC7Q9UPT5 735 aa13.88□□□□□ -0.19
CCDC88C-201ENST00000331194 NOP56O00567 594 aaKnown RBP13.87□□□□□ -0.19
CCDC88C-201ENST00000331194 AMHP03971 560 aa13.87□□□□□ -0.19
CCDC88C-201ENST00000331194 PTPN1P18031 435 aaKnown RBP13.87□□□□□ -0.19
CCDC88C-201ENST00000331194 NUDT2P50583 147 aa13.87□□□□□ -0.19
CCDC88C-201ENST00000331194 STAT2P52630 851 aa13.87□□□□□ -0.19
CCDC88C-201ENST00000331194 SLC25A11Q02978 314 aaKnown RBP13.87□□□□□ -0.19
CCDC88C-201ENST00000331194 KCNJ11Q14654 390 aa13.87□□□□□ -0.19
CCDC88C-201ENST00000331194 PPM1JQ5JR12 505 aa13.87□□□□□ -0.19
CCDC88C-201ENST00000331194 ELMSAN1Q6PJG2 1045 aa13.87□□□□□ -0.19
CCDC88C-201ENST00000331194 BBS12Q6ZW61 710 aa13.87□□□□□ -0.19
CCDC88C-201ENST00000331194 CAND1Q86VP6 1230 aaKnown RBP13.87□□□□□ -0.19
CCDC88C-201ENST00000331194 AHI1Q8N157 1196 aa13.87□□□□□ -0.19
CCDC88C-201ENST00000331194 ZSCAN18Q8TBC5 510 aaPredicted RBP13.87□□□□□ -0.19
CCDC88C-201ENST00000331194 IRGQQ8WZA9 623 aa13.87□□□□□ -0.19
CCDC88C-201ENST00000331194 CDRT15Q96T59 188 aa13.87□□□□□ -0.19
CCDC88C-201ENST00000331194 SORT1Q99523 831 aa13.87□□□□□ -0.19
CCDC88C-201ENST00000331194 ARMC7Q9H6L4 198 aa13.87□□□□□ -0.19
CCDC88C-201ENST00000331194 ZNF696Q9H7X3 374 aa13.87□□□□□ -0.19
CCDC88C-201ENST00000331194 POPDC2Q9HBU9 364 aa13.87□□□□□ -0.19
CCDC88C-201ENST00000331194 PCDH18Q9HCL0 1135 aa13.87□□□□□ -0.19
CCDC88C-201ENST00000331194 FAM198AQ9UFP1 575 aa13.87□□□□□ -0.19
CCDC88C-201ENST00000331194 BBOX1O75936 387 aa13.87□□□□□ -0.19
CCDC88C-201ENST00000331194 ALOX15P16050 662 aaPredicted RBP13.87□□□□□ -0.19
CCDC88C-201ENST00000331194 FGFR3P22607 806 aa13.87□□□□□ -0.19
CCDC88C-201ENST00000331194 EPHA3P29320 983 aa13.87□□□□□ -0.19
CCDC88C-201ENST00000331194 NR1H2P55055 460 aa13.87□□□□□ -0.19
CCDC88C-201ENST00000331194 SH3PXD2AQ5TCZ1 1133 aa13.87□□□□□ -0.19
CCDC88C-201ENST00000331194 LRRC38Q5VT99 294 aa13.87□□□□□ -0.19
CCDC88C-201ENST00000331194 GPAT2Q6NUI2 795 aa13.87□□□□□ -0.19
CCDC88C-201ENST00000331194 POTEHQ6S545 545 aa13.87□□□□□ -0.19
CCDC88C-201ENST00000331194 OLFML1Q6UWY5 402 aa13.87□□□□□ -0.19
CCDC88C-201ENST00000331194 UNC5AQ6ZN44 842 aa13.87□□□□□ -0.19
CCDC88C-201ENST00000331194 LPCAT2Q7L5N7 544 aa13.87□□□□□ -0.19
CCDC88C-201ENST00000331194 BBS5Q8N3I7 341 aa13.87□□□□□ -0.19
CCDC88C-201ENST00000331194 CORO1BQ9BR76 489 aa13.87□□□□□ -0.19
CCDC88C-201ENST00000331194 CAAP1Q9H8G2 361 aa13.87□□□□□ -0.19
CCDC88C-201ENST00000331194 FAIMQ9NVQ4 179 aa13.87□□□□□ -0.19
CCDC88C-201ENST00000331194 RRN3Q9NYV6 651 aa13.87□□□□□ -0.19
CCDC88C-201ENST00000331194 RSL24D1Q9UHA3 163 aaKnown RBP13.87□□□□□ -0.19
CCDC88C-201ENST00000331194 RNF11Q9Y3C5 154 aa13.87□□□□□ -0.19
CCDC88C-201ENST00000331194 H7C0C1 242 aa13.86□□□□□ -0.19
CCDC88C-201ENST00000331194 XPOTO43592 962 aaKnown RBP13.86□□□□□ -0.19
CCDC88C-201ENST00000331194 ATP5OP48047 213 aa13.86□□□□□ -0.19
CCDC88C-201ENST00000331194 RXRGP48443 463 aa13.86□□□□□ -0.19
CCDC88C-201ENST00000331194 CD97P48960 835 aa13.86□□□□□ -0.19
CCDC88C-201ENST00000331194 CRADDP78560 199 aa13.86□□□□□ -0.19
CCDC88C-201ENST00000331194 SLC9B1Q4ZJI4 515 aa13.86□□□□□ -0.19
CCDC88C-201ENST00000331194 TAS1R3Q7RTX0 852 aa13.86□□□□□ -0.19
CCDC88C-201ENST00000331194 GSDMBQ8TAX9 411 aa13.86□□□□□ -0.19
CCDC88C-201ENST00000331194 MAPK15Q8TD08 544 aa13.86□□□□□ -0.19
CCDC88C-201ENST00000331194 TFAP2BQ92481 460 aa13.86□□□□□ -0.19
CCDC88C-201ENST00000331194 DDX56Q9NY93 547 aaKnown RBP13.86□□□□□ -0.19
CCDC88C-201ENST00000331194 RIMS3Q9UJD0 308 aa13.86□□□□□ -0.19
CCDC88C-201ENST00000331194 NR2E3Q9Y5X4 410 aa13.86□□□□□ -0.19
CCDC88C-201ENST00000331194 MCF2LO15068 1137 aa13.86□□□□□ -0.19
CCDC88C-201ENST00000331194 E2F6O75461 281 aa13.86□□□□□ -0.19
CCDC88C-201ENST00000331194 STAMBPO95630 424 aa13.86□□□□□ -0.19
CCDC88C-201ENST00000331194 CST3P01034 146 aaPredicted RBP13.86□□□□□ -0.19
CCDC88C-201ENST00000331194 P4HA1P13674 534 aa13.86□□□□□ -0.19
CCDC88C-201ENST00000331194 CRHR1P34998 444 aa13.86□□□□□ -0.19
CCDC88C-201ENST00000331194 ORC1Q13415 861 aa13.86□□□□□ -0.19
CCDC88C-201ENST00000331194 ADGRE1Q14246 886 aa13.86□□□□□ -0.19
CCDC88C-201ENST00000331194 TRIM72Q6ZMU5 477 aa13.86□□□□□ -0.19
CCDC88C-201ENST00000331194 TMEM179Q6ZVK1 233 aa13.86□□□□□ -0.19
CCDC88C-201ENST00000331194 CMTM5Q96DZ9 223 aa13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms