RNA–Protein interactions for RNA: ENST00000330295.9

CTHRC1-201, Transcript of collagen triple helix repeat containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTHRC1, Length 1,271 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTHRC1-201ENST00000330295 SLC39A4Q6P5W5 647 aa15.61■□□□□ 0.09
CTHRC1-201ENST00000330295 KANSL1Q7Z3B3 1105 aa15.61■□□□□ 0.09
CTHRC1-201ENST00000330295 TOP6BLQ8N6T0 577 aa15.61■□□□□ 0.09
CTHRC1-201ENST00000330295 PDZD8Q8NEN9 1154 aa15.61■□□□□ 0.09
CTHRC1-201ENST00000330295 OR2T3Q8NH03 318 aa15.61■□□□□ 0.09
CTHRC1-201ENST00000330295 SNX29Q8TEQ0 813 aa15.61■□□□□ 0.09
CTHRC1-201ENST00000330295 OVCA2Q8WZ82 227 aa15.61■□□□□ 0.09
CTHRC1-201ENST00000330295 BHMTQ93088 406 aa15.61■□□□□ 0.09
CTHRC1-201ENST00000330295 CCNL2Q96S94 520 aaPredicted RBP15.61■□□□□ 0.09
CTHRC1-201ENST00000330295 CCSER2Q9H7U1 834 aa15.61■□□□□ 0.09
CTHRC1-201ENST00000330295 UTP3Q9NQZ2 479 aaKnown RBP eCLIP15.61■□□□□ 0.09
CTHRC1-201ENST00000330295 GDAP2Q9NXN4 497 aa15.61■□□□□ 0.09
CTHRC1-201ENST00000330295 FBXO10Q9UK96 956 aa15.61■□□□□ 0.09
CTHRC1-201ENST00000330295 CDH9Q9ULB4 789 aa15.61■□□□□ 0.09
CTHRC1-201ENST00000330295 AGAP1Q9UPQ3 857 aa15.61■□□□□ 0.09
CTHRC1-201ENST00000330295 SLC27A6Q9Y2P4 619 aa15.61■□□□□ 0.09
CTHRC1-201ENST00000330295 SNX9Q9Y5X1 595 aa15.61■□□□□ 0.09
CTHRC1-201ENST00000330295 ITPR3Q14573 2671 aa15.61■□□□□ 0.09
CTHRC1-201ENST00000330295 A0A1W2PPC4 97 aa15.6■□□□□ 0.09
CTHRC1-201ENST00000330295 PPFIA2O75334 1257 aa15.6■□□□□ 0.09
CTHRC1-201ENST00000330295 CSO75390 466 aaKnown RBP15.6■□□□□ 0.09
CTHRC1-201ENST00000330295 ITGB3P05106 788 aa15.6■□□□□ 0.09
CTHRC1-201ENST00000330295 LMO2P25791 158 aa15.6■□□□□ 0.09
CTHRC1-201ENST00000330295 YWHAQP27348 245 aa15.6■□□□□ 0.09
CTHRC1-201ENST00000330295 RBMS1P29558 406 aaKnown RBP15.6■□□□□ 0.09
CTHRC1-201ENST00000330295 FOXK1P85037 733 aa15.6■□□□□ 0.09
CTHRC1-201ENST00000330295 CUL4AQ13619 759 aa15.6■□□□□ 0.09
CTHRC1-201ENST00000330295 GEN1Q17RS7 908 aa15.6■□□□□ 0.09
CTHRC1-201ENST00000330295 NT5DC4Q86YG4 428 aa15.6■□□□□ 0.09
CTHRC1-201ENST00000330295 PCED1BQ96HM7 432 aa15.6■□□□□ 0.09
CTHRC1-201ENST00000330295 SLC46A1Q96NT5 459 aa15.6■□□□□ 0.09
CTHRC1-201ENST00000330295 SGK2Q9HBY8 427 aa15.6■□□□□ 0.09
CTHRC1-201ENST00000330295 PLK2Q9NYY3 685 aa15.6■□□□□ 0.09
CTHRC1-201ENST00000330295 EFSO43281 561 aa15.59■□□□□ 0.09
CTHRC1-201ENST00000330295 OPA1O60313 960 aa15.59■□□□□ 0.09
CTHRC1-201ENST00000330295 C7P10643 843 aa15.59■□□□□ 0.09
CTHRC1-201ENST00000330295 CD38P28907 300 aa15.59■□□□□ 0.09
CTHRC1-201ENST00000330295 RXRGP48443 463 aa15.59■□□□□ 0.09
CTHRC1-201ENST00000330295 TUBP50607 506 aa15.59■□□□□ 0.09
CTHRC1-201ENST00000330295 MFAP3P55082 362 aa15.59■□□□□ 0.09
CTHRC1-201ENST00000330295 E2F5Q15329 346 aa15.59■□□□□ 0.09
CTHRC1-201ENST00000330295 SOWAHAQ2M3V2 549 aa15.59■□□□□ 0.09
CTHRC1-201ENST00000330295 KIAA0895LQ68EN5 471 aa15.59■□□□□ 0.09
CTHRC1-201ENST00000330295 LRRC52Q8N7C0 313 aa15.59■□□□□ 0.09
CTHRC1-201ENST00000330295 FBXO32Q969P5 355 aa15.59■□□□□ 0.09
CTHRC1-201ENST00000330295 INTS4Q96HW7 963 aaKnown RBP15.59■□□□□ 0.09
CTHRC1-201ENST00000330295 NACA2Q9H009 215 aa15.59■□□□□ 0.09
CTHRC1-201ENST00000330295 LARSQ9P2J5 1176 aaKnown RBP15.59■□□□□ 0.09
CTHRC1-201ENST00000330295 CHORDC1Q9UHD1 332 aaPredicted RBP15.59■□□□□ 0.09
CTHRC1-201ENST00000330295 SATB2Q9UPW6 733 aa15.59■□□□□ 0.09
CTHRC1-201ENST00000330295 K7ELQ4 463 aaPredicted RBP15.58■□□□□ 0.08
CTHRC1-201ENST00000330295 SIGLEC6O43699 453 aa15.58■□□□□ 0.08
CTHRC1-201ENST00000330295 HSP90AA1P07900 732 aaKnown RBP15.58■□□□□ 0.08
CTHRC1-201ENST00000330295 PLCG1P19174 1290 aa15.58■□□□□ 0.08
CTHRC1-201ENST00000330295 POU3F2P20265 443 aaPredicted RBP15.58■□□□□ 0.08
CTHRC1-201ENST00000330295 POU5F1Q01860 360 aaKnown RBP15.58■□□□□ 0.08
CTHRC1-201ENST00000330295 CAMK2GQ13555 558 aaPredicted RBP15.58■□□□□ 0.08
CTHRC1-201ENST00000330295 IGFBP7Q16270 282 aa15.58■□□□□ 0.08
CTHRC1-201ENST00000330295 C3orf38Q5JPI3 329 aa15.58■□□□□ 0.08
CTHRC1-201ENST00000330295 SNX30Q5VWJ9 437 aa15.58■□□□□ 0.08
CTHRC1-201ENST00000330295 SERPINA13PQ6UXR4 307 aa15.58■□□□□ 0.08
CTHRC1-201ENST00000330295 USP53Q70EK8 1073 aa15.58■□□□□ 0.08
CTHRC1-201ENST00000330295 KCNK18Q7Z418 384 aa15.58■□□□□ 0.08
CTHRC1-201ENST00000330295 HSCBQ8IWL3 235 aa15.58■□□□□ 0.08
CTHRC1-201ENST00000330295 C1orf127Q8N9H9 656 aa15.58■□□□□ 0.08
CTHRC1-201ENST00000330295 EPN3Q9H201 632 aa15.58■□□□□ 0.08
CTHRC1-201ENST00000330295 AASDHPPTQ9NRN7 309 aa15.58■□□□□ 0.08
CTHRC1-201ENST00000330295 TMEM30AQ9NV96 361 aa15.58■□□□□ 0.08
CTHRC1-201ENST00000330295 ELOVL2Q9NXB9 296 aa15.58■□□□□ 0.08
CTHRC1-201ENST00000330295 PLEKHB1Q9UF11 243 aaPredicted RBP15.58■□□□□ 0.08
CTHRC1-201ENST00000330295 ATXN7L1Q9ULK2 861 aaPredicted RBP15.58■□□□□ 0.08
CTHRC1-201ENST00000330295 RTN3O95197 1032 aaPredicted RBP15.57■□□□□ 0.08
CTHRC1-201ENST00000330295 BMP15O95972 392 aa15.57■□□□□ 0.08
CTHRC1-201ENST00000330295 CACNA2D1P54289 1103 aa15.57■□□□□ 0.08
CTHRC1-201ENST00000330295 DAB2P98082 770 aa15.57■□□□□ 0.08
CTHRC1-201ENST00000330295 TFAMQ00059 246 aaKnown RBP15.57■□□□□ 0.08
CTHRC1-201ENST00000330295 SCARA3Q6AZY7 606 aa15.57■□□□□ 0.08
CTHRC1-201ENST00000330295 ADALQ6DHV7 355 aa15.57■□□□□ 0.08
CTHRC1-201ENST00000330295 BRAPQ7Z569 592 aa15.57■□□□□ 0.08
CTHRC1-201ENST00000330295 NUP93Q8N1F7 819 aa15.57■□□□□ 0.08
CTHRC1-201ENST00000330295 OXR1Q8N573 874 aa15.57■□□□□ 0.08
CTHRC1-201ENST00000330295 MYCBPAPQ8TBZ2 947 aa15.57■□□□□ 0.08
CTHRC1-201ENST00000330295 KBTBD7Q8WVZ9 684 aa15.57■□□□□ 0.08
CTHRC1-201ENST00000330295 SGF29Q96ES7 293 aa15.57■□□□□ 0.08
CTHRC1-201ENST00000330295 P2RY11Q96G91 374 aa15.57■□□□□ 0.08
CTHRC1-201ENST00000330295 GZF1Q9H116 711 aaPredicted RBP15.57■□□□□ 0.08
CTHRC1-201ENST00000330295 SLC25A18Q9H1K4 315 aa15.57■□□□□ 0.08
CTHRC1-201ENST00000330295 ERVMER34-1Q9H9K5 563 aa15.57■□□□□ 0.08
CTHRC1-201ENST00000330295 EBF2Q9HAK2 575 aa15.57■□□□□ 0.08
CTHRC1-201ENST00000330295 LSM7Q9UK45 103 aaKnown RBP15.57■□□□□ 0.08
CTHRC1-201ENST00000330295 A0A1W2PNU3 283 aaPredicted RBP15.56■□□□□ 0.08
CTHRC1-201ENST00000330295 A0A1W2PR77 199 aa15.56■□□□□ 0.08
CTHRC1-201ENST00000330295 VPS37CA5D8V6 355 aaPredicted RBP15.56■□□□□ 0.08
CTHRC1-201ENST00000330295 CDRT15L2A8MXV6 281 aa15.56■□□□□ 0.08
CTHRC1-201ENST00000330295 TRIM38O00635 465 aa15.56■□□□□ 0.08
CTHRC1-201ENST00000330295 IL18RAPO95256 599 aa15.56■□□□□ 0.08
CTHRC1-201ENST00000330295 SCP2P22307 547 aa15.56■□□□□ 0.08
CTHRC1-201ENST00000330295 PRPHP41219 470 aa15.56■□□□□ 0.08
CTHRC1-201ENST00000330295 NXPH1P58417 271 aa15.56■□□□□ 0.08
CTHRC1-201ENST00000330295 ZBTB16Q05516 673 aa15.56■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms