RNA–Protein interactions for RNA: ENST00000328642.11

SYNM-201, Transcript of synemin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYNM, Length 3,960 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNM-201ENST00000328642 SETSIPP0DME0 302 aa16.53■□□□□ 0.24
SYNM-201ENST00000328642 ZC3H3Q8IXZ2 948 aaKnown RBP16.53■□□□□ 0.24
SYNM-201ENST00000328642 ANKRD52Q8NB46 1076 aa16.53■□□□□ 0.24
SYNM-201ENST00000328642 OR52K1Q8NGK4 314 aa16.53■□□□□ 0.24
SYNM-201ENST00000328642 GSDMBQ8TAX9 411 aa16.53■□□□□ 0.24
SYNM-201ENST00000328642 ARMCX1Q9P291 453 aa16.53■□□□□ 0.24
SYNM-201ENST00000328642 AFF4Q9UHB7 1163 aaKnown RBP16.53■□□□□ 0.24
SYNM-201ENST00000328642 PIRTP0C851 137 aa16.53■□□□□ 0.24
SYNM-201ENST00000328642 ZDHHC24Q6UX98 284 aa16.53■□□□□ 0.24
SYNM-201ENST00000328642 CDC26Q8NHZ8 85 aa16.53■□□□□ 0.24
SYNM-201ENST00000328642 ZMAT2Q96NC0 199 aaKnown RBP16.53■□□□□ 0.24
SYNM-201ENST00000328642 NRDE2Q9H7Z3 1164 aa16.53■□□□□ 0.24
SYNM-201ENST00000328642 OR12D3Q9UGF7 316 aa16.53■□□□□ 0.24
SYNM-201ENST00000328642 IPO11Q9UI26 975 aaKnown RBP16.53■□□□□ 0.24
SYNM-201ENST00000328642 GOLGA8QA0A0J9YX86 632 aa16.53■□□□□ 0.24
SYNM-201ENST00000328642 GOLGA8OA6NCC3 632 aa16.53■□□□□ 0.24
SYNM-201ENST00000328642 GOLGA8NF8WBI6 632 aa16.53■□□□□ 0.24
SYNM-201ENST00000328642 ALDH7A1P49419 539 aaKnown RBP16.53■□□□□ 0.24
SYNM-201ENST00000328642 LILRA4P59901 499 aa16.53■□□□□ 0.24
SYNM-201ENST00000328642 MRPS6P82932 125 aaKnown RBP16.53■□□□□ 0.24
SYNM-201ENST00000328642 COG7P83436 770 aa16.53■□□□□ 0.24
SYNM-201ENST00000328642 OCRLQ01968 901 aa16.53■□□□□ 0.24
SYNM-201ENST00000328642 BBS12Q6ZW61 710 aa16.53■□□□□ 0.24
SYNM-201ENST00000328642 TAS2R42Q7RTR8 314 aa16.53■□□□□ 0.24
SYNM-201ENST00000328642 CYP4X1Q8N118 509 aa16.53■□□□□ 0.24
SYNM-201ENST00000328642 ZCCHC9Q8N567 271 aaKnown RBP16.53■□□□□ 0.24
SYNM-201ENST00000328642 ATAD1Q8NBU5 361 aa16.53■□□□□ 0.24
SYNM-201ENST00000328642 SHCBP1Q8NEM2 672 aa16.53■□□□□ 0.24
SYNM-201ENST00000328642 MPP6Q9NZW5 540 aa16.53■□□□□ 0.24
SYNM-201ENST00000328642 SHOC2Q9UQ13 582 aa16.53■□□□□ 0.24
SYNM-201ENST00000328642 A0A1B0GUA9 196 aa16.53■□□□□ 0.24
SYNM-201ENST00000328642 TBKBP1A7MCY6 615 aa16.53■□□□□ 0.24
SYNM-201ENST00000328642 MAXP61244 160 aa16.53■□□□□ 0.24
SYNM-201ENST00000328642 MTDHQ86UE4 582 aaKnown RBP16.53■□□□□ 0.24
SYNM-201ENST00000328642 ELMO2Q96JJ3 720 aa16.53■□□□□ 0.24
SYNM-201ENST00000328642 PCDH18Q9HCL0 1135 aa16.53■□□□□ 0.24
SYNM-201ENST00000328642 SHANK3Q9BYB0 1731 aa16.52■□□□□ 0.24
SYNM-201ENST00000328642 SOAT2O75908 522 aa16.52■□□□□ 0.24
SYNM-201ENST00000328642 ERCC2P18074 760 aa16.52■□□□□ 0.24
SYNM-201ENST00000328642 LHX1P48742 406 aa16.52■□□□□ 0.24
SYNM-201ENST00000328642 ARHGEF6Q15052 776 aa16.52■□□□□ 0.24
SYNM-201ENST00000328642 KCNA10Q16322 511 aa16.52■□□□□ 0.24
SYNM-201ENST00000328642 TRIM42Q8IWZ5 723 aa16.52■□□□□ 0.24
SYNM-201ENST00000328642 CCDC185Q8N715 623 aa16.52■□□□□ 0.24
SYNM-201ENST00000328642 E2F7Q96AV8 911 aa16.52■□□□□ 0.24
SYNM-201ENST00000328642 ZCWPW1Q9H0M4 648 aa16.52■□□□□ 0.24
SYNM-201ENST00000328642 SLC40A1Q9NP59 571 aa16.52■□□□□ 0.24
SYNM-201ENST00000328642 ATP11BQ9Y2G3 1177 aa16.52■□□□□ 0.24
SYNM-201ENST00000328642 TUBP50607 506 aa16.52■□□□□ 0.23
SYNM-201ENST00000328642 PRKCZQ05513 592 aa16.52■□□□□ 0.23
SYNM-201ENST00000328642 TARBP2Q15633 366 aaKnown RBP16.52■□□□□ 0.23
SYNM-201ENST00000328642 STRA8Q7Z7C7 330 aa16.52■□□□□ 0.23
SYNM-201ENST00000328642 TTC30AQ86WT1 665 aa16.52■□□□□ 0.23
SYNM-201ENST00000328642 SENP1Q9P0U3 644 aa16.52■□□□□ 0.23
SYNM-201ENST00000328642 SDR42E2A6NKP2 422 aa16.52■□□□□ 0.23
SYNM-201ENST00000328642 FNBP1LQ5T0N5 605 aa16.52■□□□□ 0.23
SYNM-201ENST00000328642 MECRQ9BV79 373 aa16.52■□□□□ 0.23
SYNM-201ENST00000328642 PAPPAQ13219 1627 aa16.51■□□□□ 0.23
SYNM-201ENST00000328642 TCRBV7S3A2A0A539 114 aa16.51■□□□□ 0.23
SYNM-201ENST00000328642 A8MX80 341 aa16.51■□□□□ 0.23
SYNM-201ENST00000328642 GPD2P43304 727 aa16.51■□□□□ 0.23
SYNM-201ENST00000328642 SOWAHAQ2M3V2 549 aa16.51■□□□□ 0.23
SYNM-201ENST00000328642 CHADLQ6NUI6 762 aa16.51■□□□□ 0.23
SYNM-201ENST00000328642 SPATA6LQ8N4H0 392 aa16.51■□□□□ 0.23
SYNM-201ENST00000328642 MYLPFQ96A32 169 aa16.51■□□□□ 0.23
SYNM-201ENST00000328642 FICDQ9BVA6 458 aa16.51■□□□□ 0.23
SYNM-201ENST00000328642 ARHGAP39Q9C0H5 1083 aa16.51■□□□□ 0.23
SYNM-201ENST00000328642 SENP6Q9GZR1 1112 aaPredicted RBP16.51■□□□□ 0.23
SYNM-201ENST00000328642 TRIM33Q9UPN9 1127 aa16.51■□□□□ 0.23
SYNM-201ENST00000328642 CBX6O95503 412 aa16.51■□□□□ 0.23
SYNM-201ENST00000328642 PDHA1P08559 390 aa16.51■□□□□ 0.23
SYNM-201ENST00000328642 TCN1P20061 433 aaPredicted RBP16.51■□□□□ 0.23
SYNM-201ENST00000328642 WEE1P30291 646 aa16.51■□□□□ 0.23
SYNM-201ENST00000328642 MAP2K2P36507 400 aa16.51■□□□□ 0.23
SYNM-201ENST00000328642 SCTRP47872 440 aa16.51■□□□□ 0.23
SYNM-201ENST00000328642 MAP3K10Q02779 954 aa16.51■□□□□ 0.23
SYNM-201ENST00000328642 MREGQ8N565 214 aa16.51■□□□□ 0.23
SYNM-201ENST00000328642 MUC3BQ9H195 1237 aa16.51■□□□□ 0.23
SYNM-201ENST00000328642 POPDC2Q9HBU9 364 aa16.51■□□□□ 0.23
SYNM-201ENST00000328642 ETNK2Q9NVF9 386 aa16.51■□□□□ 0.23
SYNM-201ENST00000328642 TFE3P19532 575 aaPredicted RBP16.51■□□□□ 0.23
SYNM-201ENST00000328642 PLK1P53350 603 aa16.51■□□□□ 0.23
SYNM-201ENST00000328642 TTC39BQ5VTQ0 682 aaPredicted RBP16.51■□□□□ 0.23
SYNM-201ENST00000328642 POLNQ7Z5Q5 900 aa16.51■□□□□ 0.23
SYNM-201ENST00000328642 PTAR1Q7Z6K3 402 aaPredicted RBP16.51■□□□□ 0.23
SYNM-201ENST00000328642 PARP9Q8IXQ6 854 aa16.51■□□□□ 0.23
SYNM-201ENST00000328642 ZDHHC14Q8IZN3 488 aa16.51■□□□□ 0.23
SYNM-201ENST00000328642 WNT8BQ93098 351 aa16.51■□□□□ 0.23
SYNM-201ENST00000328642 PGM2Q96G03 612 aa16.51■□□□□ 0.23
SYNM-201ENST00000328642 RNF208Q9H0X6 261 aa16.51■□□□□ 0.23
SYNM-201ENST00000328642 USH1CQ9Y6N9 552 aa16.51■□□□□ 0.23
SYNM-201ENST00000328642 ZC3H4Q9UPT8 1303 aaKnown RBP16.5■□□□□ 0.23
SYNM-201ENST00000328642 MYL2P10916 166 aa16.5■□□□□ 0.23
SYNM-201ENST00000328642 CRYBB1P53674 252 aaPredicted RBP16.5■□□□□ 0.23
SYNM-201ENST00000328642 LCLAT1Q6UWP7 414 aa16.5■□□□□ 0.23
SYNM-201ENST00000328642 NLRP9Q7RTR0 991 aa16.5■□□□□ 0.23
SYNM-201ENST00000328642 DCP1BQ8IZD4 617 aaKnown RBP16.5■□□□□ 0.23
SYNM-201ENST00000328642 KIRREL3Q8IZU9 778 aa16.5■□□□□ 0.23
SYNM-201ENST00000328642 SH3TC2Q8TF17 1288 aa16.5■□□□□ 0.23
SYNM-201ENST00000328642 EXOC2Q96KP1 924 aa16.5■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms