RNA–Protein interactions for RNA: ENST00000328159.8

TPM3-205, Transcript of tropomyosin 3, humanhuman

TSL 2 BASIC

Gene TPM3, Length 1,771 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-205ENST00000328159 EEF2KO00418 725 aaKnown RBP15.47■□□□□ 0.07
TPM3-205ENST00000328159 TCEA3O75764 348 aa15.47■□□□□ 0.07
TPM3-205ENST00000328159 TMEM63AO94886 807 aa15.47■□□□□ 0.07
TPM3-205ENST00000328159 GRIK1P39086 918 aa15.47■□□□□ 0.07
TPM3-205ENST00000328159 GAD2Q05329 585 aa15.47■□□□□ 0.07
TPM3-205ENST00000328159 FASTKD3Q14CZ7 662 aaKnown RBP15.47■□□□□ 0.07
TPM3-205ENST00000328159 LONRF1Q17RB8 773 aa15.47■□□□□ 0.07
TPM3-205ENST00000328159 TTC19Q6DKK2 380 aaPredicted RBP15.47■□□□□ 0.07
TPM3-205ENST00000328159 SCAMP5Q8TAC9 235 aa15.47■□□□□ 0.07
TPM3-205ENST00000328159 SERPINB12Q96P63 405 aa15.47■□□□□ 0.07
TPM3-205ENST00000328159 TRIM62Q9BVG3 475 aa15.47■□□□□ 0.07
TPM3-205ENST00000328159 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP15.47■□□□□ 0.072e-12■■□□□ 14.3
TPM3-205ENST00000328159 DTLQ9NZJ0 730 aa15.47■□□□□ 0.07
TPM3-205ENST00000328159 XPO7Q9UIA9 1087 aaKnown RBP15.47■□□□□ 0.07
TPM3-205ENST00000328159 ADAM28Q9UKQ2 775 aa15.47■□□□□ 0.07
TPM3-205ENST00000328159 EIF3HO15372 352 aaKnown RBP eCLIP15.47■□□□□ 0.07
TPM3-205ENST00000328159 HOXA2O43364 376 aa15.47■□□□□ 0.07
TPM3-205ENST00000328159 CREB3O43889 395 aa15.47■□□□□ 0.07
TPM3-205ENST00000328159 IVLP07476 585 aa15.47■□□□□ 0.07
TPM3-205ENST00000328159 CXCR3P49682 368 aa15.47■□□□□ 0.07
TPM3-205ENST00000328159 SLC5A3P53794 718 aa15.47■□□□□ 0.07
TPM3-205ENST00000328159 ATN1P54259 1190 aaPredicted RBP15.47■□□□□ 0.07
TPM3-205ENST00000328159 IFI35P80217 286 aaPredicted RBP15.47■□□□□ 0.07
TPM3-205ENST00000328159 STAT4Q14765 748 aa15.47■□□□□ 0.07
TPM3-205ENST00000328159 TNFAIP8L3Q5GJ75 292 aa15.47■□□□□ 0.07
TPM3-205ENST00000328159 VARS2Q5ST30 1063 aaKnown RBP15.47■□□□□ 0.07
TPM3-205ENST00000328159 KCNT2Q6UVM3 1135 aa15.47■□□□□ 0.07
TPM3-205ENST00000328159 LEKR1Q6ZMV7 388 aa15.47■□□□□ 0.07
TPM3-205ENST00000328159 BZW1Q7L1Q6 419 aaKnown RBP15.47■□□□□ 0.07
TPM3-205ENST00000328159 BEND5Q7L4P6 421 aa15.47■□□□□ 0.07
TPM3-205ENST00000328159 NPAS4Q8IUM7 802 aa15.47■□□□□ 0.07
TPM3-205ENST00000328159 ZBED8Q8IZ13 594 aa15.47■□□□□ 0.07
TPM3-205ENST00000328159 LRRN4Q8WUT4 740 aa15.47■□□□□ 0.07
TPM3-205ENST00000328159 SCLYQ96I15 445 aa15.47■□□□□ 0.07
TPM3-205ENST00000328159 CCDC77Q9BR77 488 aa15.47■□□□□ 0.07
TPM3-205ENST00000328159 COLEC11Q9BWP8 271 aa15.47■□□□□ 0.07
TPM3-205ENST00000328159 ANLNQ9NQW6 1124 aa15.47■□□□□ 0.07
TPM3-205ENST00000328159 DYNC1LI1Q9Y6G9 523 aaKnown RBP15.47■□□□□ 0.07
TPM3-205ENST00000328159 MYO16Q9Y6X6 1858 aa15.46■□□□□ 0.07
TPM3-205ENST00000328159 A0A087WUV0 522 aaPredicted RBP15.46■□□□□ 0.07
TPM3-205ENST00000328159 ERICH4A6NGS2 130 aa15.46■□□□□ 0.07
TPM3-205ENST00000328159 HACD1B0YJ81 288 aa15.46■□□□□ 0.07
TPM3-205ENST00000328159 TNFRSF10BO14763 440 aa15.46■□□□□ 0.07
TPM3-205ENST00000328159 DGKIO75912 1065 aa15.46■□□□□ 0.07
TPM3-205ENST00000328159 MDH1P40925 334 aaKnown RBP15.46■□□□□ 0.07
TPM3-205ENST00000328159 DPYSQ14117 519 aa15.46■□□□□ 0.07
TPM3-205ENST00000328159 KCNJ11Q14654 390 aa15.46■□□□□ 0.07
TPM3-205ENST00000328159 NFE2Q16621 373 aaPredicted RBP15.46■□□□□ 0.07
TPM3-205ENST00000328159 ARL13BQ3SXY8 428 aa15.46■□□□□ 0.07
TPM3-205ENST00000328159 CTXN3Q4LDR2 81 aa15.46■□□□□ 0.07
TPM3-205ENST00000328159 HP1BP3Q5SSJ5 553 aaPredicted RBP15.46■□□□□ 0.07
TPM3-205ENST00000328159 FNBP1LQ5T0N5 605 aa15.46■□□□□ 0.07
TPM3-205ENST00000328159 FAM171A1Q5VUB5 890 aa15.46■□□□□ 0.07
TPM3-205ENST00000328159 C4orf22Q6V702 233 aa15.46■□□□□ 0.07
TPM3-205ENST00000328159 TAC4Q86UU9 113 aa15.46■□□□□ 0.07
TPM3-205ENST00000328159 SCN4BQ8IWT1 228 aa15.46■□□□□ 0.07
TPM3-205ENST00000328159 CCDC13Q8IYE1 715 aa15.46■□□□□ 0.07
TPM3-205ENST00000328159 DQX1Q8TE96 717 aaKnown RBP15.46■□□□□ 0.07
TPM3-205ENST00000328159 OLFM3Q96PB7 478 aa15.46■□□□□ 0.07
TPM3-205ENST00000328159 BEGAINQ9BUH8 593 aa15.46■□□□□ 0.07
TPM3-205ENST00000328159 MARCH5Q9NX47 278 aa15.46■□□□□ 0.07
TPM3-205ENST00000328159 ABI2Q9NYB9 513 aaPredicted RBP15.46■□□□□ 0.07
TPM3-205ENST00000328159 SLC12A6Q9UHW9 1150 aa15.46■□□□□ 0.07
TPM3-205ENST00000328159 LOC101059915A0A1B0GWI6 518 aaPredicted RBP15.45■□□□□ 0.06
TPM3-205ENST00000328159 E7ESA3 106 aa15.45■□□□□ 0.06
TPM3-205ENST00000328159 I6L893 689 aaPredicted RBP15.45■□□□□ 0.06
TPM3-205ENST00000328159 CHADO15335 359 aa15.45■□□□□ 0.06
TPM3-205ENST00000328159 MFSD11O43934 449 aa15.45■□□□□ 0.06
TPM3-205ENST00000328159 BANF1O75531 89 aa15.45■□□□□ 0.06
TPM3-205ENST00000328159 GCATO75600 419 aa15.45■□□□□ 0.06
TPM3-205ENST00000328159 CXCL10P02778 98 aa15.45■□□□□ 0.06
TPM3-205ENST00000328159 ALDH2P05091 517 aa15.45■□□□□ 0.06
TPM3-205ENST00000328159 SLC11A1P49279 550 aa15.45■□□□□ 0.06
TPM3-205ENST00000328159 CCL23P55773 120 aa15.45■□□□□ 0.06
TPM3-205ENST00000328159 YWHAGP61981 247 aaKnown RBP eCLIP15.45■□□□□ 0.06
TPM3-205ENST00000328159 GUCY1A3Q02108 690 aa15.45■□□□□ 0.06
TPM3-205ENST00000328159 IFRD2Q12894 506 aaPredicted RBP15.45■□□□□ 0.06
TPM3-205ENST00000328159 SEMA3BQ13214 749 aa15.45■□□□□ 0.06
TPM3-205ENST00000328159 MSS51Q4VC12 460 aa15.45■□□□□ 0.06
TPM3-205ENST00000328159 SLC39A5Q6ZMH5 540 aa15.45■□□□□ 0.06
TPM3-205ENST00000328159 RFX8Q6ZV50 586 aa15.45■□□□□ 0.06
TPM3-205ENST00000328159 ANKRD33Q7Z3H0 272 aa15.45■□□□□ 0.06
TPM3-205ENST00000328159 CEP57Q86XR8 500 aa15.45■□□□□ 0.06
TPM3-205ENST00000328159 CRIPAKQ8N1N5 446 aa15.45■□□□□ 0.06
TPM3-205ENST00000328159 CCDC33Q8N5R6 958 aa15.45■□□□□ 0.06
TPM3-205ENST00000328159 FUBP3Q96I24 572 aaKnown RBP eCLIP15.45■□□□□ 0.06
TPM3-205ENST00000328159 HIPK3Q9H422 1215 aa15.45■□□□□ 0.06
TPM3-205ENST00000328159 RAB6BQ9NRW1 208 aa15.45■□□□□ 0.06
TPM3-205ENST00000328159 SF3B1O75533 1304 aaKnown RBP eCLIP15.45■□□□□ 0.067e-7■■■■■ 108.6
TPM3-205ENST00000328159 FNDC1Q4ZHG4 1894 aaPredicted RBP15.44■□□□□ 0.06
TPM3-205ENST00000328159 FAM72CH0Y354 149 aa15.44■□□□□ 0.06
TPM3-205ENST00000328159 AMHP03971 560 aa15.44■□□□□ 0.06
TPM3-205ENST00000328159 FGFR3P22607 806 aa15.44■□□□□ 0.06
TPM3-205ENST00000328159 HCAR3P49019 387 aa15.44■□□□□ 0.06
TPM3-205ENST00000328159 MRPL58Q14197 206 aaKnown RBP15.44■□□□□ 0.06
TPM3-205ENST00000328159 PAFAH1B3Q15102 231 aaKnown RBP15.44■□□□□ 0.06
TPM3-205ENST00000328159 FAM72AQ5TYM5 149 aa15.44■□□□□ 0.06
TPM3-205ENST00000328159 FAM72DQ6L9T8 149 aa15.44■□□□□ 0.06
TPM3-205ENST00000328159 VSTM1Q6UX27 236 aa15.44■□□□□ 0.06
TPM3-205ENST00000328159 LRRC31Q6UY01 552 aa15.44■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms