RNA–Protein interactions for RNA: ENST00000327028.8

VIPAS39-201, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

TSL 5 BASIC

Gene VIPAS39, Length 2,614 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-201ENST00000327028 TAZQ16635 292 aa10.64□□□□□ -0.71
VIPAS39-201ENST00000327028 ARL13BQ3SXY8 428 aa10.64□□□□□ -0.71
VIPAS39-201ENST00000327028 EFHC2Q5JST6 749 aa10.64□□□□□ -0.71
VIPAS39-201ENST00000327028 AADACL2Q6P093 401 aa10.64□□□□□ -0.71
VIPAS39-201ENST00000327028 MFSD7Q6UXD7 560 aa10.64□□□□□ -0.71
VIPAS39-201ENST00000327028 SPOCD1Q6ZMY3 1216 aa10.64□□□□□ -0.71
VIPAS39-201ENST00000327028 GAREM2Q75VX8 874 aa10.64□□□□□ -0.71
VIPAS39-201ENST00000327028 ZNF572Q7Z3I7 529 aaPredicted RBP10.64□□□□□ -0.71
VIPAS39-201ENST00000327028 VSIG1Q86XK7 387 aa10.64□□□□□ -0.71
VIPAS39-201ENST00000327028 RNF25Q96BH1 459 aaPredicted RBP10.64□□□□□ -0.71
VIPAS39-201ENST00000327028 ZNF707Q96C28 371 aaPredicted RBP10.64□□□□□ -0.71
VIPAS39-201ENST00000327028 SLC39A13Q96H72 371 aa10.64□□□□□ -0.71
VIPAS39-201ENST00000327028 WDCPQ9H6R7 721 aa10.64□□□□□ -0.71
VIPAS39-201ENST00000327028 SFXN1Q9H9B4 322 aa10.64□□□□□ -0.71
VIPAS39-201ENST00000327028 GPATCH2LQ9NWQ4 482 aa10.64□□□□□ -0.71
VIPAS39-201ENST00000327028 HBS1LQ9Y450 684 aaKnown RBP10.64□□□□□ -0.71
VIPAS39-201ENST00000327028 PDE2AO00408 941 aaPredicted RBP10.64□□□□□ -0.71
VIPAS39-201ENST00000327028 COCHO43405 550 aa10.64□□□□□ -0.71
VIPAS39-201ENST00000327028 IGLV3-27P01718 113 aa10.64□□□□□ -0.71
VIPAS39-201ENST00000327028 SLC2A3P11169 496 aa10.64□□□□□ -0.71
VIPAS39-201ENST00000327028 ADRA1BP35368 520 aa10.64□□□□□ -0.71
VIPAS39-201ENST00000327028 PAFAH1B1P43034 410 aa10.64□□□□□ -0.71
VIPAS39-201ENST00000327028 HYAL1Q12794 435 aa10.64□□□□□ -0.71
VIPAS39-201ENST00000327028 KRT81Q14533 505 aa10.64□□□□□ -0.71
VIPAS39-201ENST00000327028 CA9Q16790 459 aa10.64□□□□□ -0.71
VIPAS39-201ENST00000327028 ZC3H12AQ5D1E8 599 aaKnown RBP10.64□□□□□ -0.71
VIPAS39-201ENST00000327028 TCEAL5Q5H9L2 206 aa10.64□□□□□ -0.71
VIPAS39-201ENST00000327028 CEP112Q8N8E3 955 aa10.64□□□□□ -0.71
VIPAS39-201ENST00000327028 KCTD6Q8NC69 237 aa10.64□□□□□ -0.71
VIPAS39-201ENST00000327028 MRPS31Q92665 395 aaKnown RBP10.64□□□□□ -0.71
VIPAS39-201ENST00000327028 RNF34Q969K3 372 aa10.64□□□□□ -0.71
VIPAS39-201ENST00000327028 PKNOX2Q96KN3 472 aa10.64□□□□□ -0.71
VIPAS39-201ENST00000327028 FCRL2Q96LA5 508 aaPredicted RBP10.64□□□□□ -0.71
VIPAS39-201ENST00000327028 KCTD15Q96SI1 283 aaPredicted RBP10.64□□□□□ -0.71
VIPAS39-201ENST00000327028 NAP1L3Q99457 506 aaPredicted RBP10.64□□□□□ -0.71
VIPAS39-201ENST00000327028 PCDH18Q9HCL0 1135 aa10.64□□□□□ -0.71
VIPAS39-201ENST00000327028 SMARCAL1Q9NZC9 954 aa10.64□□□□□ -0.71
VIPAS39-201ENST00000327028 LAMA3Q16787 3333 aa10.63□□□□□ -0.71
VIPAS39-201ENST00000327028 SLC12A8A0AV02 714 aa10.63□□□□□ -0.71
VIPAS39-201ENST00000327028 C2orf78A6NCI8 922 aa10.63□□□□□ -0.71
VIPAS39-201ENST00000327028 ZNF487B1APH4 448 aa10.63□□□□□ -0.71
VIPAS39-201ENST00000327028 OLFM2O95897 454 aa10.63□□□□□ -0.71
VIPAS39-201ENST00000327028 FGGP02679 453 aa10.63□□□□□ -0.71
VIPAS39-201ENST00000327028 MYL4P12829 197 aa10.63□□□□□ -0.71
VIPAS39-201ENST00000327028 PFKLP17858 780 aa10.63□□□□□ -0.71
VIPAS39-201ENST00000327028 CDKN2BP42772 138 aa10.63□□□□□ -0.71
VIPAS39-201ENST00000327028 CDH6P55285 790 aa10.63□□□□□ -0.71
VIPAS39-201ENST00000327028 RBM10P98175 930 aaKnown RBP10.63□□□□□ -0.71
VIPAS39-201ENST00000327028 CYP4F8P98187 520 aa10.63□□□□□ -0.71
VIPAS39-201ENST00000327028 RING1Q06587 406 aa10.63□□□□□ -0.71
VIPAS39-201ENST00000327028 TFDP3Q5H9I0 405 aa10.63□□□□□ -0.71
VIPAS39-201ENST00000327028 TMEM184AQ6ZMB5 413 aa10.63□□□□□ -0.71
VIPAS39-201ENST00000327028 SLC13A5Q86YT5 568 aaPredicted RBP10.63□□□□□ -0.71
VIPAS39-201ENST00000327028 MIB1Q86YT6 1006 aa10.63□□□□□ -0.71
VIPAS39-201ENST00000327028 MAP7D3Q8IWC1 876 aa10.63□□□□□ -0.71
VIPAS39-201ENST00000327028 EFHBQ8N7U6 833 aa10.63□□□□□ -0.71
VIPAS39-201ENST00000327028 ZNF670Q9BS34 389 aa10.63□□□□□ -0.71
VIPAS39-201ENST00000327028 OSBPL8Q9BZF1 889 aa10.63□□□□□ -0.71
VIPAS39-201ENST00000327028 NACA2Q9H009 215 aa10.63□□□□□ -0.71
VIPAS39-201ENST00000327028 TKTL2Q9H0I9 626 aa10.63□□□□□ -0.71
VIPAS39-201ENST00000327028 TTYH1Q9H313 450 aaPredicted RBP10.63□□□□□ -0.71
VIPAS39-201ENST00000327028 DHX35Q9H5Z1 703 aaKnown RBP10.63□□□□□ -0.71
VIPAS39-201ENST00000327028 SLTMQ9NWH9 1034 aaKnown RBP eCLIP10.63□□□□□ -0.71
VIPAS39-201ENST00000327028 HCFC1R1Q9NWW0 138 aa10.63□□□□□ -0.71
VIPAS39-201ENST00000327028 MTMR10Q9NXD2 777 aa10.63□□□□□ -0.71
VIPAS39-201ENST00000327028 DNMT3BQ9UBC3 853 aaKnown RBP10.63□□□□□ -0.71
VIPAS39-201ENST00000327028 MYO9BQ13459 2157 aa10.63□□□□□ -0.71
VIPAS39-201ENST00000327028 hCG_1818297A0A087WSY0 165 aa10.63□□□□□ -0.71
VIPAS39-201ENST00000327028 CCDC195A0A1B0GUA6 201 aa10.63□□□□□ -0.71
VIPAS39-201ENST00000327028 KCNU1A8MYU2 1149 aa10.63□□□□□ -0.71
VIPAS39-201ENST00000327028 I6L893 689 aaPredicted RBP10.63□□□□□ -0.71
VIPAS39-201ENST00000327028 APOEP02649 317 aa10.63□□□□□ -0.71
VIPAS39-201ENST00000327028 RHOP08100 348 aa10.63□□□□□ -0.71
VIPAS39-201ENST00000327028 CD48P09326 243 aa10.63□□□□□ -0.71
VIPAS39-201ENST00000327028 L1CAMP32004 1257 aa10.63□□□□□ -0.71
VIPAS39-201ENST00000327028 GTF2F1P35269 517 aaKnown RBP eCLIP10.63□□□□□ -0.71
VIPAS39-201ENST00000327028 DPYSL3Q14195 570 aa10.63□□□□□ -0.71
VIPAS39-201ENST00000327028 ZNF697Q5TEC3 545 aa10.63□□□□□ -0.71
VIPAS39-201ENST00000327028 PDZD4Q76G19 769 aaPredicted RBP10.63□□□□□ -0.71
VIPAS39-201ENST00000327028 ANKS1BQ7Z6G8 1248 aa10.63□□□□□ -0.71
VIPAS39-201ENST00000327028 MNS1Q8NEH6 495 aa10.63□□□□□ -0.71
VIPAS39-201ENST00000327028 SHKBP1Q8TBC3 707 aa10.63□□□□□ -0.71
VIPAS39-201ENST00000327028 TSC1Q92574 1164 aa10.63□□□□□ -0.71
VIPAS39-201ENST00000327028 PRDM12Q9H4Q4 367 aa10.63□□□□□ -0.71
VIPAS39-201ENST00000327028 ANLNQ9NQW6 1124 aa10.63□□□□□ -0.71
VIPAS39-201ENST00000327028 TMPRSS4Q9NRS4 437 aa10.63□□□□□ -0.71
VIPAS39-201ENST00000327028 RCOR3Q9P2K3 495 aaPredicted RBP10.63□□□□□ -0.71
VIPAS39-201ENST00000327028 EFR3BQ9Y2G0 817 aa10.63□□□□□ -0.71
VIPAS39-201ENST00000327028 NOTCH4Q99466 2003 aa10.63□□□□□ -0.71
VIPAS39-201ENST00000327028 HELZP42694 1942 aaKnown RBP10.63□□□□□ -0.71
VIPAS39-201ENST00000327028 A0A1W2PRU2 124 aa10.62□□□□□ -0.71
VIPAS39-201ENST00000327028 RIOK3O14730 519 aaKnown RBP10.62□□□□□ -0.71
VIPAS39-201ENST00000327028 GLP2RO95838 553 aa10.62□□□□□ -0.71
VIPAS39-201ENST00000327028 SRGAP2BP0DMP2 458 aa10.62□□□□□ -0.71
VIPAS39-201ENST00000327028 CCR2P41597 374 aa10.62□□□□□ -0.71
VIPAS39-201ENST00000327028 MTA1Q13330 715 aa10.62□□□□□ -0.71
VIPAS39-201ENST00000327028 LONRF2Q1L5Z9 754 aa10.62□□□□□ -0.71
VIPAS39-201ENST00000327028 PLD4Q96BZ4 506 aa10.62□□□□□ -0.71
VIPAS39-201ENST00000327028 HAPLN3Q96S86 360 aa10.62□□□□□ -0.71
VIPAS39-201ENST00000327028 CARD6Q9BX69 1037 aa10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms