RNA–Protein interactions for RNA: ENST00000326495.9

SSH1-202, Transcript of slingshot protein phosphatase 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SSH1, Length 13,040 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH1-202ENST00000326495 TMEM117Q9H0C3 514 aa6.5□□□□□ -1.37
SSH1-202ENST00000326495 PCDH9Q9HC56 1237 aa6.5□□□□□ -1.37
SSH1-202ENST00000326495 AVENQ9NQS1 362 aaPredicted RBP6.5□□□□□ -1.37
SSH1-202ENST00000326495 ZNF609O15014 1411 aa6.5□□□□□ -1.37
SSH1-202ENST00000326495 NPY2RP49146 381 aa6.5□□□□□ -1.37
SSH1-202ENST00000326495 PRIM2P49643 509 aa6.5□□□□□ -1.37
SSH1-202ENST00000326495 FRG1Q14331 258 aaKnown RBP6.5□□□□□ -1.37
SSH1-202ENST00000326495 MTX3Q5HYI7 312 aa6.5□□□□□ -1.37
SSH1-202ENST00000326495 NOTUMQ6P988 496 aa6.5□□□□□ -1.37
SSH1-202ENST00000326495 SRBD1Q8N5C6 995 aaKnown RBP6.5□□□□□ -1.37
SSH1-202ENST00000326495 RPS6KA6Q9UK32 745 aa6.5□□□□□ -1.37
SSH1-202ENST00000326495 L1RE1Q9UN81 338 aa6.5□□□□□ -1.37
SSH1-202ENST00000326495 PTGER2P43116 358 aa6.5□□□□□ -1.37
SSH1-202ENST00000326495 PSMD4P55036 377 aaKnown RBP6.5□□□□□ -1.37
SSH1-202ENST00000326495 NAA30Q147X3 362 aaPredicted RBP6.5□□□□□ -1.37
SSH1-202ENST00000326495 SLC13A5Q86YT5 568 aaPredicted RBP6.5□□□□□ -1.37
SSH1-202ENST00000326495 KBTBD8Q8NFY9 601 aa6.5□□□□□ -1.37
SSH1-202ENST00000326495 ATL1Q8WXF7 558 aa6.5□□□□□ -1.37
SSH1-202ENST00000326495 BHMTQ93088 406 aa6.5□□□□□ -1.37
SSH1-202ENST00000326495 NLNQ9BYT8 704 aa6.5□□□□□ -1.37
SSH1-202ENST00000326495 ALG6Q9Y672 507 aa6.5□□□□□ -1.37
SSH1-202ENST00000326495 EIF2AK2P19525 551 aaKnown RBP6.49□□□□□ -1.37
SSH1-202ENST00000326495 GEMP55040 296 aa6.49□□□□□ -1.37
SSH1-202ENST00000326495 SLC9A5Q14940 896 aa6.49□□□□□ -1.37
SSH1-202ENST00000326495 CENPLQ8N0S6 344 aaPredicted RBP6.49□□□□□ -1.37
SSH1-202ENST00000326495 ACTRT2Q8TDY3 377 aa6.49□□□□□ -1.37
SSH1-202ENST00000326495 DCLK3Q9C098 648 aa6.49□□□□□ -1.37
SSH1-202ENST00000326495 FBXO44Q9H4M3 255 aa6.49□□□□□ -1.37
SSH1-202ENST00000326495 CD274Q9NZQ7 290 aa6.49□□□□□ -1.37
SSH1-202ENST00000326495 BCS1LQ9Y276 419 aa6.49□□□□□ -1.37
SSH1-202ENST00000326495 INPP5FQ9Y2H2 1132 aa6.49□□□□□ -1.37
SSH1-202ENST00000326495 F8VZ95 297 aa6.49□□□□□ -1.37
SSH1-202ENST00000326495 CASP1P29466 404 aa6.49□□□□□ -1.37
SSH1-202ENST00000326495 C21orf59P57076 290 aa6.49□□□□□ -1.37
SSH1-202ENST00000326495 PRR5LQ6MZQ0 368 aa6.49□□□□□ -1.37
SSH1-202ENST00000326495 ZNF280BQ86YH2 543 aa6.49□□□□□ -1.37
SSH1-202ENST00000326495 IGDCC4Q8TDY8 1250 aa6.49□□□□□ -1.37
SSH1-202ENST00000326495 ATXN7L3BQ96GX2 97 aa6.49□□□□□ -1.37
SSH1-202ENST00000326495 PNKPQ96T60 521 aa6.49□□□□□ -1.37
SSH1-202ENST00000326495 SPRTNQ9H040 489 aaPredicted RBP6.49□□□□□ -1.37
SSH1-202ENST00000326495 COL15A1P39059 1388 aa6.49□□□□□ -1.37
SSH1-202ENST00000326495 ZNF862O60290 1169 aa6.49□□□□□ -1.37
SSH1-202ENST00000326495 VIL1P09327 827 aaKnown RBP6.49□□□□□ -1.37
SSH1-202ENST00000326495 LYPLAL1Q5VWZ2 237 aa6.49□□□□□ -1.37
SSH1-202ENST00000326495 DOK7Q18PE1 504 aa6.49□□□□□ -1.37
SSH1-202ENST00000326495 RDH11Q8TC12 318 aa6.49□□□□□ -1.37
SSH1-202ENST00000326495 RORBQ92753 470 aa6.49□□□□□ -1.37
SSH1-202ENST00000326495 KCTD14Q9BQ13 255 aaPredicted RBP6.49□□□□□ -1.37
SSH1-202ENST00000326495 NIF3L1Q9GZT8 377 aa6.49□□□□□ -1.37
SSH1-202ENST00000326495 NAGPAQ9UK23 515 aa6.49□□□□□ -1.37
SSH1-202ENST00000326495 COMMD3-BMI1R4GMX3 469 aa6.49□□□□□ -1.37
SSH1-202ENST00000326495 ACADVLP49748 655 aa6.49□□□□□ -1.37
SSH1-202ENST00000326495 ROR2Q01974 943 aaKnown RBP6.49□□□□□ -1.37
SSH1-202ENST00000326495 TBL3Q12788 808 aaKnown RBP6.49□□□□□ -1.37
SSH1-202ENST00000326495 ERFEQ4G0M1 354 aa6.49□□□□□ -1.37
SSH1-202ENST00000326495 THEMIS2Q5TEJ8 643 aa6.49□□□□□ -1.37
SSH1-202ENST00000326495 IZUMO2Q6UXV1 221 aa6.49□□□□□ -1.37
SSH1-202ENST00000326495 STRA8Q7Z7C7 330 aa6.49□□□□□ -1.37
SSH1-202ENST00000326495 MCRS1Q96EZ8 462 aa6.49□□□□□ -1.37
SSH1-202ENST00000326495 PANX3Q96QZ0 392 aa6.49□□□□□ -1.37
SSH1-202ENST00000326495 KLF6Q99612 283 aaPredicted RBP6.49□□□□□ -1.37
SSH1-202ENST00000326495 TMEM79Q9BSE2 394 aa6.49□□□□□ -1.37
SSH1-202ENST00000326495 FAM217BQ9NTX9 383 aaPredicted RBP6.49□□□□□ -1.37
SSH1-202ENST00000326495 SLC22A2O15244 555 aa6.49□□□□□ -1.37
SSH1-202ENST00000326495 SULT1E1P49888 294 aa6.49□□□□□ -1.37
SSH1-202ENST00000326495 BCAT1P54687 386 aa6.49□□□□□ -1.37
SSH1-202ENST00000326495 FCHO2Q0JRZ9 810 aa6.49□□□□□ -1.37
SSH1-202ENST00000326495 KLHDC7AQ5VTJ3 777 aa6.49□□□□□ -1.37
SSH1-202ENST00000326495 MASTLQ96GX5 879 aa6.49□□□□□ -1.37
SSH1-202ENST00000326495 MLH1P40692 756 aa6.49□□□□□ -1.37
SSH1-202ENST00000326495 HARS2P49590 506 aaKnown RBP6.49□□□□□ -1.37
SSH1-202ENST00000326495 ADARP55265 1226 aaKnown RBP6.49□□□□□ -1.37
SSH1-202ENST00000326495 C1QBPQ07021 282 aaKnown RBP6.49□□□□□ -1.37
SSH1-202ENST00000326495 SHQ1Q6PI26 577 aaKnown RBP6.49□□□□□ -1.37
SSH1-202ENST00000326495 LRRC34Q8IZ02 419 aa6.49□□□□□ -1.37
SSH1-202ENST00000326495 RNASE11Q8TAA1 199 aaKnown RBP6.49□□□□□ -1.37
SSH1-202ENST00000326495 PTCD3Q96EY7 689 aaKnown RBP6.49□□□□□ -1.37
SSH1-202ENST00000326495 HAO1Q9UJM8 370 aa6.49□□□□□ -1.37
SSH1-202ENST00000326495 ADAM28Q9UKQ2 775 aa6.49□□□□□ -1.37
SSH1-202ENST00000326495 V9GYQ6 96 aa6.49□□□□□ -1.37
SSH1-202ENST00000326495 NKRFO15226 690 aaKnown RBP eCLIP6.49□□□□□ -1.37
SSH1-202ENST00000326495 GH2P01242 217 aa6.49□□□□□ -1.37
SSH1-202ENST00000326495 CXCR2P25025 360 aa6.49□□□□□ -1.37
SSH1-202ENST00000326495 PPIL2Q13356 520 aa6.49□□□□□ -1.37
SSH1-202ENST00000326495 SUZ12Q15022 739 aaKnown RBP6.49□□□□□ -1.37
SSH1-202ENST00000326495 CYP51A1Q16850 503 aa6.49□□□□□ -1.37
SSH1-202ENST00000326495 SYTL3Q4VX76 610 aa6.49□□□□□ -1.37
SSH1-202ENST00000326495 SERHL2Q9H4I8 314 aa6.49□□□□□ -1.37
SSH1-202ENST00000326495 SERHLQ9NQF3 203 aa6.49□□□□□ -1.37
SSH1-202ENST00000326495 LATS2Q9NRM7 1088 aa6.49□□□□□ -1.37
SSH1-202ENST00000326495 KCNK4Q9NYG8 393 aa6.49□□□□□ -1.37
SSH1-202ENST00000326495 SEC14L4Q9UDX3 406 aa6.49□□□□□ -1.37
SSH1-202ENST00000326495 CRYL1Q9Y2S2 319 aa6.49□□□□□ -1.37
SSH1-202ENST00000326495 NBPF26B4DH59 902 aa6.49□□□□□ -1.37
SSH1-202ENST00000326495 USP17L10C9JJH3 530 aa6.49□□□□□ -1.37
SSH1-202ENST00000326495 DPYSL4O14531 572 aa6.49□□□□□ -1.37
SSH1-202ENST00000326495 RABL6Q3YEC7 729 aaPredicted RBP6.49□□□□□ -1.37
SSH1-202ENST00000326495 EPS8L1Q8TE68 723 aa6.49□□□□□ -1.37
SSH1-202ENST00000326495 MPZL2O60487 215 aa6.49□□□□□ -1.37
SSH1-202ENST00000326495 BNIP2Q12982 314 aa6.49□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms