RNA–Protein interactions for RNA: ENST00000326470.9

SSH1-201, Transcript of slingshot protein phosphatase 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SSH1, Length 2,432 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH1-201ENST00000326470 TRIP10Q15642 601 aa17.28■□□□□ 0.36
SSH1-201ENST00000326470 C16orf46Q6P387 395 aa17.28■□□□□ 0.36
SSH1-201ENST00000326470 UGT2A3Q6UWM9 527 aa17.28■□□□□ 0.36
SSH1-201ENST00000326470 MAVSQ7Z434 540 aa17.28■□□□□ 0.36
SSH1-201ENST00000326470 PQLC3Q8N755 202 aa17.28■□□□□ 0.36
SSH1-201ENST00000326470 ACMSDQ8TDX5 336 aa17.28■□□□□ 0.36
SSH1-201ENST00000326470 CCDC124Q96CT7 223 aaKnown RBP17.28■□□□□ 0.36
SSH1-201ENST00000326470 CMTM5Q96DZ9 223 aa17.28■□□□□ 0.36
SSH1-201ENST00000326470 BCO2Q9BYV7 579 aa17.28■□□□□ 0.36
SSH1-201ENST00000326470 DNAJC28Q9NX36 388 aa17.28■□□□□ 0.36
SSH1-201ENST00000326470 MOCS1Q9NZB8 636 aa17.28■□□□□ 0.36
SSH1-201ENST00000326470 SF3B1O75533 1304 aaKnown RBP eCLIP17.27■□□□□ 0.363e-6■■■■■ 137.9
SSH1-201ENST00000326470 A6NJR5 290 aa17.27■□□□□ 0.36
SSH1-201ENST00000326470 C2CD4BA6NLJ0 364 aa17.27■□□□□ 0.36
SSH1-201ENST00000326470 SERPINE1P05121 402 aa17.27■□□□□ 0.36
SSH1-201ENST00000326470 VAV1P15498 845 aa17.27■□□□□ 0.36
SSH1-201ENST00000326470 IDH3AP50213 366 aa17.27■□□□□ 0.36
SSH1-201ENST00000326470 EFNA5P52803 228 aa17.27■□□□□ 0.36
SSH1-201ENST00000326470 CDH8P55286 799 aa17.27■□□□□ 0.36
SSH1-201ENST00000326470 PTPN11Q06124 597 aaPredicted RBP17.27■□□□□ 0.36
SSH1-201ENST00000326470 TBC1D25Q3MII6 688 aa17.27■□□□□ 0.36
SSH1-201ENST00000326470 N4BP2L1Q5TBK1 243 aaPredicted RBP17.27■□□□□ 0.36
SSH1-201ENST00000326470 TRNP1Q6NT89 227 aa17.27■□□□□ 0.36
SSH1-201ENST00000326470 C4orf22Q6V702 233 aa17.27■□□□□ 0.36
SSH1-201ENST00000326470 CYS1Q717R9 158 aa17.27■□□□□ 0.36
SSH1-201ENST00000326470 SPATA24Q86W54 205 aa17.27■□□□□ 0.36
SSH1-201ENST00000326470 RXFP2Q8WXD0 754 aa17.27■□□□□ 0.36
SSH1-201ENST00000326470 ANKRD36BP1Q96IX9 119 aa17.27■□□□□ 0.36
SSH1-201ENST00000326470 OCEL1Q9H607 264 aa17.27■□□□□ 0.36
SSH1-201ENST00000326470 GLRA3O75311 464 aa17.27■□□□□ 0.35
SSH1-201ENST00000326470 PENKP01210 267 aaPredicted RBP17.27■□□□□ 0.35
SSH1-201ENST00000326470 RAG1P15918 1043 aa17.27■□□□□ 0.35
SSH1-201ENST00000326470 ITGAXP20702 1163 aa17.27■□□□□ 0.35
SSH1-201ENST00000326470 SERPINB6P35237 376 aa17.27■□□□□ 0.35
SSH1-201ENST00000326470 GPD2P43304 727 aa17.27■□□□□ 0.35
SSH1-201ENST00000326470 TARBP2Q15633 366 aaKnown RBP17.27■□□□□ 0.35
SSH1-201ENST00000326470 C15orf59Q2T9L4 293 aaPredicted RBP17.27■□□□□ 0.35
SSH1-201ENST00000326470 SLC9A4Q6AI14 798 aa17.27■□□□□ 0.35
SSH1-201ENST00000326470 SNRNP48Q6IEG0 339 aaKnown RBP17.27■□□□□ 0.35
SSH1-201ENST00000326470 SATL1Q86VE3 508 aa17.27■□□□□ 0.35
SSH1-201ENST00000326470 MTMR14Q8NCE2 650 aa17.27■□□□□ 0.35
SSH1-201ENST00000326470 USP6NLQ92738 828 aa17.27■□□□□ 0.35
SSH1-201ENST00000326470 TWNKQ96RR1 684 aa17.27■□□□□ 0.35
SSH1-201ENST00000326470 CYP4F11Q9HBI6 524 aa17.27■□□□□ 0.35
SSH1-201ENST00000326470 ATP9BO43861 1147 aa17.26■□□□□ 0.35
SSH1-201ENST00000326470 B4GALT4O60513 344 aa17.26■□□□□ 0.35
SSH1-201ENST00000326470 PLIN3O60664 434 aa17.26■□□□□ 0.35
SSH1-201ENST00000326470 ALOX15P16050 662 aaPredicted RBP17.26■□□□□ 0.35
SSH1-201ENST00000326470 PDGFRAP16234 1089 aa17.26■□□□□ 0.35
SSH1-201ENST00000326470 TPSB2P20231 275 aa17.26■□□□□ 0.35
SSH1-201ENST00000326470 KCNA4P22459 653 aa17.26■□□□□ 0.35
SSH1-201ENST00000326470 TPSAB1Q15661 275 aa17.26■□□□□ 0.35
SSH1-201ENST00000326470 ZNF667Q5HYK9 610 aa17.26■□□□□ 0.35
SSH1-201ENST00000326470 PDPK2PQ6A1A2 396 aa17.26■□□□□ 0.35
SSH1-201ENST00000326470 KBTBD6Q86V97 674 aa17.26■□□□□ 0.35
SSH1-201ENST00000326470 DEFB107AQ8IZN7 70 aa17.26■□□□□ 0.35
SSH1-201ENST00000326470 PPP4R1Q8TF05 950 aa17.26■□□□□ 0.35
SSH1-201ENST00000326470 PSME4Q14997 1843 aa17.26■□□□□ 0.35
SSH1-201ENST00000326470 H3BNX3 289 aa17.26■□□□□ 0.35
SSH1-201ENST00000326470 M0QYV0 167 aa17.26■□□□□ 0.35
SSH1-201ENST00000326470 MAP3K6O95382 1288 aa17.26■□□□□ 0.35
SSH1-201ENST00000326470 METTL18O95568 372 aa17.26■□□□□ 0.35
SSH1-201ENST00000326470 FOLH1Q04609 750 aa17.26■□□□□ 0.35
SSH1-201ENST00000326470 ITGA9Q13797 1035 aa17.26■□□□□ 0.35
SSH1-201ENST00000326470 MAP7Q14244 749 aa17.26■□□□□ 0.35
SSH1-201ENST00000326470 PCLAFQ15004 111 aa17.26■□□□□ 0.35
SSH1-201ENST00000326470 BOLA3Q53S33 107 aa17.26■□□□□ 0.35
SSH1-201ENST00000326470 FBXL19Q6PCT2 694 aa17.26■□□□□ 0.35
SSH1-201ENST00000326470 HPS6Q86YV9 775 aa17.26■□□□□ 0.35
SSH1-201ENST00000326470 FBXW8Q8N3Y1 598 aa17.26■□□□□ 0.35
SSH1-201ENST00000326470 ICA1LQ8NDH6 482 aa17.26■□□□□ 0.35
SSH1-201ENST00000326470 REPS2Q8NFH8 660 aa17.26■□□□□ 0.35
SSH1-201ENST00000326470 PCDH19Q8TAB3 1148 aa17.26■□□□□ 0.35
SSH1-201ENST00000326470 PRPF31Q8WWY3 499 aaKnown RBP17.26■□□□□ 0.35
SSH1-201ENST00000326470 SORT1Q99523 831 aa17.26■□□□□ 0.35
SSH1-201ENST00000326470 PNPOQ9NVS9 261 aa17.26■□□□□ 0.35
SSH1-201ENST00000326470 TMCO1Q9UM00 188 aa17.26■□□□□ 0.35
SSH1-201ENST00000326470 PHF24Q9UPV7 400 aa17.26■□□□□ 0.35
SSH1-201ENST00000326470 IGKV6D-21A0A0A0MT36 114 aa17.25■□□□□ 0.35
SSH1-201ENST00000326470 ZNF195O14628 629 aa17.25■□□□□ 0.35
SSH1-201ENST00000326470 LGR5O75473 907 aa17.25■□□□□ 0.35
SSH1-201ENST00000326470 ALDOAP04075 364 aaKnown RBP17.25■□□□□ 0.35
SSH1-201ENST00000326470 SPATA31D3P0C874 917 aa17.25■□□□□ 0.35
SSH1-201ENST00000326470 GRK2P25098 689 aa17.25■□□□□ 0.35
SSH1-201ENST00000326470 CDO1Q16878 200 aa17.25■□□□□ 0.35
SSH1-201ENST00000326470 OGFRL1Q5TC84 451 aaPredicted RBP17.25■□□□□ 0.35
SSH1-201ENST00000326470 ATG14Q6ZNE5 492 aa17.25■□□□□ 0.35
SSH1-201ENST00000326470 SPATA31D4Q6ZUB0 917 aa17.25■□□□□ 0.35
SSH1-201ENST00000326470 RSPH3Q86UC2 560 aa17.25■□□□□ 0.35
SSH1-201ENST00000326470 HIPK4Q8NE63 616 aa17.25■□□□□ 0.35
SSH1-201ENST00000326470 TFB1MQ8WVM0 346 aaKnown RBP17.25■□□□□ 0.35
SSH1-201ENST00000326470 DGCR14Q96DF8 476 aaKnown RBP17.25■□□□□ 0.35
SSH1-201ENST00000326470 HIC2Q96JB3 615 aa17.25■□□□□ 0.35
SSH1-201ENST00000326470 GCOM2Q9BZD3 368 aaPredicted RBP17.25■□□□□ 0.35
SSH1-201ENST00000326470 SHCBP1LQ9BZQ2 653 aa17.25■□□□□ 0.35
SSH1-201ENST00000326470 ELOVL4Q9GZR5 314 aa17.25■□□□□ 0.35
SSH1-201ENST00000326470 VPS33BQ9H267 617 aa17.25■□□□□ 0.35
SSH1-201ENST00000326470 PCDH18Q9HCL0 1135 aa17.25■□□□□ 0.35
SSH1-201ENST00000326470 HMGXB4Q9UGU5 601 aa17.25■□□□□ 0.35
SSH1-201ENST00000326470 DCDC2Q9UHG0 476 aa17.25■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms