RNA–Protein interactions for RNA: ENST00000324340.13

DDX39A-202, Transcript of DExD-box helicase 39A, humanhuman

TSL 1 (best)

Gene DDX39A, Length 1,355 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-202ENST00000324340 C6orf89Q6UWU4 347 aa13.25□□□□□ -0.29
DDX39A-202ENST00000324340 TMC7Q7Z402 723 aa13.25□□□□□ -0.29
DDX39A-202ENST00000324340 PSTKQ8IV42 348 aaKnown RBP13.25□□□□□ -0.29
DDX39A-202ENST00000324340 ZNF276Q8N554 614 aa13.25□□□□□ -0.29
DDX39A-202ENST00000324340 MRPL43Q8N983 215 aaKnown RBP13.25□□□□□ -0.29
DDX39A-202ENST00000324340 POF1BQ8WVV4 589 aa13.25□□□□□ -0.29
DDX39A-202ENST00000324340 OVCA2Q8WZ82 227 aa13.25□□□□□ -0.29
DDX39A-202ENST00000324340 RAPGEF5Q92565 580 aa13.25□□□□□ -0.29
DDX39A-202ENST00000324340 MYRFLQ96LU7 910 aa13.25□□□□□ -0.29
DDX39A-202ENST00000324340 KLHL5Q96PQ7 755 aa13.25□□□□□ -0.29
DDX39A-202ENST00000324340 TGS1Q96RS0 853 aaKnown RBP13.25□□□□□ -0.29
DDX39A-202ENST00000324340 TCF25Q9BQ70 676 aa13.25□□□□□ -0.29
DDX39A-202ENST00000324340 UBE2OQ9C0C9 1292 aaKnown RBP13.25□□□□□ -0.29
DDX39A-202ENST00000324340 SMOC2Q9H3U7 446 aa13.25□□□□□ -0.29
DDX39A-202ENST00000324340 ZWILCHQ9H900 591 aa13.25□□□□□ -0.29
DDX39A-202ENST00000324340 NMUR1Q9HB89 426 aa13.25□□□□□ -0.29
DDX39A-202ENST00000324340 CYP4F11Q9HBI6 524 aa13.25□□□□□ -0.29
DDX39A-202ENST00000324340 ALG13Q9NP73 1137 aaKnown RBP13.25□□□□□ -0.29
DDX39A-202ENST00000324340 TLR9Q9NR96 1032 aa13.25□□□□□ -0.29
DDX39A-202ENST00000324340 CLIC5Q9NZA1 410 aa13.25□□□□□ -0.29
DDX39A-202ENST00000324340 YIPF1Q9Y548 306 aa13.25□□□□□ -0.29
DDX39A-202ENST00000324340 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP13.24□□□□□ -0.29
DDX39A-202ENST00000324340 A0A1W2PQH9 124 aa13.24□□□□□ -0.29
DDX39A-202ENST00000324340 ANKRD33BA6NCL7 494 aa13.24□□□□□ -0.29
DDX39A-202ENST00000324340 C2orf71A6NGG8 1288 aa13.24□□□□□ -0.29
DDX39A-202ENST00000324340 ANKRD65E5RJM6 399 aa13.24□□□□□ -0.29
DDX39A-202ENST00000324340 TGM5O43548 720 aa13.24□□□□□ -0.29
DDX39A-202ENST00000324340 ADH1AP07327 375 aa13.24□□□□□ -0.29
DDX39A-202ENST00000324340 CSH1P0DML2 217 aa13.24□□□□□ -0.29
DDX39A-202ENST00000324340 CSH2P0DML3 217 aa13.24□□□□□ -0.29
DDX39A-202ENST00000324340 KDELR1P24390 212 aa13.24□□□□□ -0.29
DDX39A-202ENST00000324340 GJC1P36383 396 aa13.24□□□□□ -0.29
DDX39A-202ENST00000324340 CETN2P41208 172 aa13.24□□□□□ -0.29
DDX39A-202ENST00000324340 CDKN2BP42772 138 aa13.24□□□□□ -0.29
DDX39A-202ENST00000324340 ATXN1P54253 815 aaKnown RBP13.24□□□□□ -0.29
DDX39A-202ENST00000324340 IFRD2Q12894 506 aaPredicted RBP13.24□□□□□ -0.29
DDX39A-202ENST00000324340 KLF1Q13351 362 aaPredicted RBP13.24□□□□□ -0.29
DDX39A-202ENST00000324340 MTMR3Q13615 1198 aa13.24□□□□□ -0.29
DDX39A-202ENST00000324340 CAMK1Q14012 370 aa13.24□□□□□ -0.29
DDX39A-202ENST00000324340 PDK2Q15119 407 aa13.24□□□□□ -0.29
DDX39A-202ENST00000324340 SIX1Q15475 284 aaPredicted RBP13.24□□□□□ -0.29
DDX39A-202ENST00000324340 SMTNL2Q2TAL5 461 aa13.24□□□□□ -0.29
DDX39A-202ENST00000324340 LACTB2Q53H82 288 aaPredicted RBP13.24□□□□□ -0.29
DDX39A-202ENST00000324340 KCNT1Q5JUK3 1230 aa13.24□□□□□ -0.29
DDX39A-202ENST00000324340 ERMARDQ5T6L9 678 aa13.24□□□□□ -0.29
DDX39A-202ENST00000324340 SNX30Q5VWJ9 437 aa13.24□□□□□ -0.29
DDX39A-202ENST00000324340 BTBD8Q5XKL5 378 aa13.24□□□□□ -0.29
DDX39A-202ENST00000324340 MSANTD2Q6P1R3 559 aa13.24□□□□□ -0.29
DDX39A-202ENST00000324340 SPOCD1Q6ZMY3 1216 aa13.24□□□□□ -0.29
DDX39A-202ENST00000324340 SPRED2Q7Z698 418 aa13.24□□□□□ -0.29
DDX39A-202ENST00000324340 ANKS1BQ7Z6G8 1248 aa13.24□□□□□ -0.29
DDX39A-202ENST00000324340 STKLD1Q8NE28 680 aa13.24□□□□□ -0.29
DDX39A-202ENST00000324340 SLC7A14Q8TBB6 771 aa13.24□□□□□ -0.29
DDX39A-202ENST00000324340 CCHCR1Q8TD31 782 aa13.24□□□□□ -0.29
DDX39A-202ENST00000324340 GPR152Q8TDT2 470 aa13.24□□□□□ -0.29
DDX39A-202ENST00000324340 DQX1Q8TE96 717 aaKnown RBP13.24□□□□□ -0.29
DDX39A-202ENST00000324340 EDEM1Q92611 657 aa13.24□□□□□ -0.29
DDX39A-202ENST00000324340 N4BP2L2Q92802 583 aaPredicted RBP13.24□□□□□ -0.29
DDX39A-202ENST00000324340 FBXO32Q969P5 355 aa13.24□□□□□ -0.29
DDX39A-202ENST00000324340 NTAN1Q96AB6 310 aa13.24□□□□□ -0.29
DDX39A-202ENST00000324340 TRMT2BQ96GJ1 504 aaKnown RBP13.24□□□□□ -0.29
DDX39A-202ENST00000324340 SNRNP25Q9BV90 132 aaKnown RBP13.24□□□□□ -0.29
DDX39A-202ENST00000324340 EMILIN2Q9BXX0 1053 aa13.24□□□□□ -0.29
DDX39A-202ENST00000324340 OSBPL8Q9BZF1 889 aa13.24□□□□□ -0.29
DDX39A-202ENST00000324340 WDR6Q9NNW5 1121 aaKnown RBP13.24□□□□□ -0.29
DDX39A-202ENST00000324340 TLR8Q9NR97 1041 aaKnown RBP13.24□□□□□ -0.29
DDX39A-202ENST00000324340 HOMER3Q9NSC5 361 aa13.24□□□□□ -0.29
DDX39A-202ENST00000324340 RBM12Q9NTZ6 932 aaKnown RBP13.24□□□□□ -0.29
DDX39A-202ENST00000324340 PIGVQ9NUD9 493 aa13.24□□□□□ -0.29
DDX39A-202ENST00000324340 OSER1Q9NX31 292 aa13.24□□□□□ -0.29
DDX39A-202ENST00000324340 GMIPQ9P107 970 aa13.24□□□□□ -0.29
DDX39A-202ENST00000324340 YBX2Q9Y2T7 364 aaKnown RBP13.24□□□□□ -0.29
DDX39A-202ENST00000324340 INSL5Q9Y5Q6 135 aa13.24□□□□□ -0.29
DDX39A-202ENST00000324340 PDE4DIPQ5VU43 2346 aa13.24□□□□□ -0.29
DDX39A-202ENST00000324340 hCG_1818297A0A087WSY0 165 aa13.23□□□□□ -0.29
DDX39A-202ENST00000324340 HSFX4A0A1B0GTS1 333 aaPredicted RBP13.23□□□□□ -0.29
DDX39A-202ENST00000324340 HSFX3A0A1B0GWH4 333 aaPredicted RBP13.23□□□□□ -0.29
DDX39A-202ENST00000324340 LRRD1A4D1F6 860 aa13.23□□□□□ -0.29
DDX39A-202ENST00000324340 ZNF487B1APH4 448 aa13.23□□□□□ -0.29
DDX39A-202ENST00000324340 HMGB1P1B2RPK0 211 aaPredicted RBP13.23□□□□□ -0.29
DDX39A-202ENST00000324340 H3BNC9 293 aa13.23□□□□□ -0.29
DDX39A-202ENST00000324340 KRIT1O00522 736 aa13.23□□□□□ -0.29
DDX39A-202ENST00000324340 FAM107AO95990 144 aa13.23□□□□□ -0.29
DDX39A-202ENST00000324340 HMGA1P17096 107 aaKnown RBP13.23□□□□□ -0.29
DDX39A-202ENST00000324340 BMP8BP34820 402 aa13.23□□□□□ -0.29
DDX39A-202ENST00000324340 ALDH1A3P47895 512 aa13.23□□□□□ -0.29
DDX39A-202ENST00000324340 CXCR3P49682 368 aa13.23□□□□□ -0.29
DDX39A-202ENST00000324340 DEUP1Q05D60 604 aa13.23□□□□□ -0.29
DDX39A-202ENST00000324340 C2orf54Q08AI8 447 aa13.23□□□□□ -0.29
DDX39A-202ENST00000324340 SCAPQ12770 1279 aa13.23□□□□□ -0.29
DDX39A-202ENST00000324340 TAF10Q12962 218 aa13.23□□□□□ -0.29
DDX39A-202ENST00000324340 PLD1Q13393 1074 aa13.23□□□□□ -0.29
DDX39A-202ENST00000324340 DPYSL2Q16555 572 aa13.23□□□□□ -0.29
DDX39A-202ENST00000324340 CYP1B1Q16678 543 aa13.23□□□□□ -0.29
DDX39A-202ENST00000324340 TFDP3Q5H9I0 405 aa13.23□□□□□ -0.29
DDX39A-202ENST00000324340 PDE12Q6L8Q7 609 aaKnown RBP13.23□□□□□ -0.29
DDX39A-202ENST00000324340 SCYL2Q6P3W7 929 aa13.23□□□□□ -0.29
DDX39A-202ENST00000324340 TLDC1Q6P9B6 456 aa13.23□□□□□ -0.29
DDX39A-202ENST00000324340 MFSD7Q6UXD7 560 aa13.23□□□□□ -0.29
DDX39A-202ENST00000324340 RTL10Q7L3V2 364 aa13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms