RNA–Protein interactions for RNA: ENST00000323959.8

CSTF3-201, Transcript of cleavage stimulation factor subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSTF3, Length 2,797 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF3-201ENST00000323959 PDE4CQ08493 712 aa7.06□□□□□ -1.28
CSTF3-201ENST00000323959 ART3Q13508 389 aa7.06□□□□□ -1.28
CSTF3-201ENST00000323959 IQCB1Q15051 598 aa7.06□□□□□ -1.28
CSTF3-201ENST00000323959 UGCGQ16739 394 aa7.06□□□□□ -1.28
CSTF3-201ENST00000323959 ATF7IP2Q5U623 682 aa7.06□□□□□ -1.28
CSTF3-201ENST00000323959 TRMT1LQ7Z2T5 733 aaKnown RBP7.06□□□□□ -1.28
CSTF3-201ENST00000323959 APBB1IPQ7Z5R6 666 aaPredicted RBP7.06□□□□□ -1.28
CSTF3-201ENST00000323959 NEK8Q86SG6 692 aa7.06□□□□□ -1.28
CSTF3-201ENST00000323959 REXO1Q8N1G1 1221 aaKnown RBP7.06□□□□□ -1.28
CSTF3-201ENST00000323959 SCFD1Q8WVM8 642 aa7.06□□□□□ -1.28
CSTF3-201ENST00000323959 ANO3Q9BYT9 981 aa7.06□□□□□ -1.28
CSTF3-201ENST00000323959 CDH19Q9H159 772 aa7.06□□□□□ -1.28
CSTF3-201ENST00000323959 DLL4Q9NR61 685 aa7.06□□□□□ -1.28
CSTF3-201ENST00000323959 TBC1D14Q9P2M4 693 aa7.06□□□□□ -1.28
CSTF3-201ENST00000323959 TP53TG5Q9Y2B4 290 aa7.06□□□□□ -1.28
CSTF3-201ENST00000323959 NUB1Q9Y5A7 615 aa7.06□□□□□ -1.28
CSTF3-201ENST00000323959 PCDHA5Q9Y5H7 936 aa7.06□□□□□ -1.28
CSTF3-201ENST00000323959 SLCO1B1Q9Y6L6 691 aa7.06□□□□□ -1.28
CSTF3-201ENST00000323959 CRYBG3Q68DQ2 2970 aa7.05□□□□□ -1.28
CSTF3-201ENST00000323959 A0A1W2PR77 199 aa7.05□□□□□ -1.28
CSTF3-201ENST00000323959 TRIM38O00635 465 aa7.05□□□□□ -1.28
CSTF3-201ENST00000323959 EDIL3O43854 480 aa7.05□□□□□ -1.28
CSTF3-201ENST00000323959 DKC1O60832 514 aaKnown RBP eCLIP7.05□□□□□ -1.28
CSTF3-201ENST00000323959 NOL4O94818 638 aa7.05□□□□□ -1.28
CSTF3-201ENST00000323959 SEMA4FO95754 770 aa7.05□□□□□ -1.28
CSTF3-201ENST00000323959 CKMP06732 381 aa7.05□□□□□ -1.28
CSTF3-201ENST00000323959 CSH1P0DML2 217 aa7.05□□□□□ -1.28
CSTF3-201ENST00000323959 CSH2P0DML3 217 aa7.05□□□□□ -1.28
CSTF3-201ENST00000323959 COX6B1P14854 86 aa7.05□□□□□ -1.28
CSTF3-201ENST00000323959 PAX3P23760 479 aa7.05□□□□□ -1.28
CSTF3-201ENST00000323959 WASP42768 502 aa7.05□□□□□ -1.28
CSTF3-201ENST00000323959 NAPAP54920 295 aa7.05□□□□□ -1.28
CSTF3-201ENST00000323959 YWHAHQ04917 246 aaPredicted RBP7.05□□□□□ -1.28
CSTF3-201ENST00000323959 DCAF4L1Q3SXM0 396 aa7.05□□□□□ -1.28
CSTF3-201ENST00000323959 KIAA0895LQ68EN5 471 aa7.05□□□□□ -1.28
CSTF3-201ENST00000323959 FBXO39Q8N4B4 442 aa7.05□□□□□ -1.28
CSTF3-201ENST00000323959 TRIM8Q9BZR9 551 aa7.05□□□□□ -1.28
CSTF3-201ENST00000323959 NAT10Q9H0A0 1025 aaKnown RBP7.05□□□□□ -1.28
CSTF3-201ENST00000323959 SLC6A17Q9H1V8 727 aa7.05□□□□□ -1.28
CSTF3-201ENST00000323959 PDCL3Q9H2J4 239 aa7.05□□□□□ -1.28
CSTF3-201ENST00000323959 DHX33Q9H6R0 707 aaKnown RBP7.05□□□□□ -1.28
CSTF3-201ENST00000323959 WDR70Q9NW82 654 aa7.05□□□□□ -1.28
CSTF3-201ENST00000323959 ESPL1Q14674 2120 aa7.05□□□□□ -1.28
CSTF3-201ENST00000323959 M0QZQ0 153 aa7.05□□□□□ -1.28
CSTF3-201ENST00000323959 PPP1R37O75864 691 aa7.05□□□□□ -1.28
CSTF3-201ENST00000323959 TPM3P06753 285 aa7.05□□□□□ -1.28
CSTF3-201ENST00000323959 HMGA1P17096 107 aaKnown RBP7.05□□□□□ -1.28
CSTF3-201ENST00000323959 ATF6P18850 670 aa7.05□□□□□ -1.28
CSTF3-201ENST00000323959 FECHP22830 423 aa7.05□□□□□ -1.28
CSTF3-201ENST00000323959 UGT1A5P35504 534 aa7.05□□□□□ -1.28
CSTF3-201ENST00000323959 PPP1R2P41236 205 aa7.05□□□□□ -1.28
CSTF3-201ENST00000323959 PPP2R2AP63151 447 aa7.05□□□□□ -1.28
CSTF3-201ENST00000323959 MESP2Q0VG99 397 aa7.05□□□□□ -1.28
CSTF3-201ENST00000323959 FUT11Q495W5 492 aa7.05□□□□□ -1.28
CSTF3-201ENST00000323959 SASS6Q6UVJ0 657 aa7.05□□□□□ -1.28
CSTF3-201ENST00000323959 CCDC13Q8IYE1 715 aa7.05□□□□□ -1.28
CSTF3-201ENST00000323959 ADGRG2Q8IZP9 1017 aa7.05□□□□□ -1.28
CSTF3-201ENST00000323959 BIRC7Q96CA5 298 aa7.05□□□□□ -1.28
CSTF3-201ENST00000323959 GSDMAQ96QA5 445 aa7.05□□□□□ -1.28
CSTF3-201ENST00000323959 STRADBQ9C0K7 418 aa7.05□□□□□ -1.28
CSTF3-201ENST00000323959 FBRSQ9HAH7 460 aa7.05□□□□□ -1.28
CSTF3-201ENST00000323959 SHANK1Q9Y566 2161 aa7.05□□□□□ -1.28
CSTF3-201ENST00000323959 SCN8AQ9UQD0 1980 aa7.04□□□□□ -1.28
CSTF3-201ENST00000323959 MKRN2OSH3BPM6 223 aa7.04□□□□□ -1.28
CSTF3-201ENST00000323959 INO80B-WBP1J3KQ70 363 aa7.04□□□□□ -1.28
CSTF3-201ENST00000323959 SORBS2O94875 1100 aaKnown RBP7.04□□□□□ -1.28
CSTF3-201ENST00000323959 TYMPP19971 482 aa7.04□□□□□ -1.28
CSTF3-201ENST00000323959 CD38P28907 300 aa7.04□□□□□ -1.28
CSTF3-201ENST00000323959 FGL2Q14314 439 aa7.04□□□□□ -1.28
CSTF3-201ENST00000323959 KCNB1Q14721 858 aa7.04□□□□□ -1.28
CSTF3-201ENST00000323959 FAM187BQ17R55 369 aa7.04□□□□□ -1.28
CSTF3-201ENST00000323959 CRTC2Q53ET0 693 aaPredicted RBP7.04□□□□□ -1.28
CSTF3-201ENST00000323959 XKR4Q5GH76 650 aa7.04□□□□□ -1.28
CSTF3-201ENST00000323959 FILIP1Q7Z7B0 1213 aa7.04□□□□□ -1.28
CSTF3-201ENST00000323959 DSG4Q86SJ6 1040 aa7.04□□□□□ -1.28
CSTF3-201ENST00000323959 C14orf79Q96F83 325 aa7.04□□□□□ -1.28
CSTF3-201ENST00000323959 PGLYRP2Q96PD5 576 aa7.04□□□□□ -1.28
CSTF3-201ENST00000323959 RIT2Q99578 217 aa7.04□□□□□ -1.28
CSTF3-201ENST00000323959 LHX5Q9H2C1 402 aa7.04□□□□□ -1.28
CSTF3-201ENST00000323959 CXXC4Q9H2H0 198 aa7.04□□□□□ -1.28
CSTF3-201ENST00000323959 RPF1Q9H9Y2 349 aaKnown RBP7.04□□□□□ -1.28
CSTF3-201ENST00000323959 KCNMB3Q9NPA1 279 aa7.04□□□□□ -1.28
CSTF3-201ENST00000323959 ZDHHC4Q9NPG8 344 aa7.04□□□□□ -1.28
CSTF3-201ENST00000323959 SLC27A5Q9Y2P5 690 aa7.04□□□□□ -1.28
CSTF3-201ENST00000323959 A0A1W2PPC4 97 aa7.04□□□□□ -1.28
CSTF3-201ENST00000323959 F12P00748 615 aaPredicted RBP7.04□□□□□ -1.28
CSTF3-201ENST00000323959 TPM2P07951 284 aa7.04□□□□□ -1.28
CSTF3-201ENST00000323959 ERCC5P28715 1186 aaPredicted RBP7.04□□□□□ -1.28
CSTF3-201ENST00000323959 ART1P52961 327 aa7.04□□□□□ -1.28
CSTF3-201ENST00000323959 YBX1P67809 324 aaKnown RBP7.04□□□□□ -1.28
CSTF3-201ENST00000323959 BNIP3Q12983 259 aa7.04□□□□□ -1.28
CSTF3-201ENST00000323959 ENPP2Q13822 863 aa7.04□□□□□ -1.28
CSTF3-201ENST00000323959 IL17AQ16552 155 aa7.04□□□□□ -1.28
CSTF3-201ENST00000323959 FOXR1Q6PIV2 292 aa7.04□□□□□ -1.28
CSTF3-201ENST00000323959 RHBDF2Q6PJF5 856 aa7.04□□□□□ -1.28
CSTF3-201ENST00000323959 LAYNQ6UX15 382 aa7.04□□□□□ -1.28
CSTF3-201ENST00000323959 ASB18Q6ZVZ8 466 aa7.04□□□□□ -1.28
CSTF3-201ENST00000323959 HEATR3Q7Z4Q2 680 aa7.04□□□□□ -1.28
CSTF3-201ENST00000323959 IQCHQ86VS3 1027 aa7.04□□□□□ -1.28
CSTF3-201ENST00000323959 IFI44Q8TCB0 444 aa7.04□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms