RNA–Protein interactions for RNA: ENST00000318007.9

PDLIM5-202, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best) BASIC

Gene PDLIM5, Length 1,960 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-202ENST00000318007 CA9Q16790 459 aa16.02■□□□□ 0.15
PDLIM5-202ENST00000318007 PPP6R3Q5H9R7 873 aaPredicted RBP16.02■□□□□ 0.15
PDLIM5-202ENST00000318007 ARCQ7LC44 396 aa16.02■□□□□ 0.15
PDLIM5-202ENST00000318007 CCDC50Q8IVM0 306 aa16.02■□□□□ 0.15
PDLIM5-202ENST00000318007 NIPA2Q8N8Q9 360 aa16.02■□□□□ 0.15
PDLIM5-202ENST00000318007 HDAC7Q8WUI4 952 aa16.02■□□□□ 0.15
PDLIM5-202ENST00000318007 OVCA2Q8WZ82 227 aa16.02■□□□□ 0.15
PDLIM5-202ENST00000318007 NT5C3BQ969T7 300 aa16.02■□□□□ 0.15
PDLIM5-202ENST00000318007 WBP2Q969T9 261 aa16.02■□□□□ 0.15
PDLIM5-202ENST00000318007 RNF25Q96BH1 459 aaPredicted RBP16.02■□□□□ 0.15
PDLIM5-202ENST00000318007 SERPINB11Q96P15 392 aa16.02■□□□□ 0.15
PDLIM5-202ENST00000318007 TRIM62Q9BVG3 475 aa16.02■□□□□ 0.15
PDLIM5-202ENST00000318007 WDR6Q9NNW5 1121 aaKnown RBP16.02■□□□□ 0.15
PDLIM5-202ENST00000318007 DZANK1Q9NVP4 752 aa16.02■□□□□ 0.15
PDLIM5-202ENST00000318007 LMCD1Q9NZU5 365 aa16.02■□□□□ 0.15
PDLIM5-202ENST00000318007 JRKLQ9Y4A0 524 aa16.02■□□□□ 0.15
PDLIM5-202ENST00000318007 CPQQ9Y646 472 aa16.02■□□□□ 0.15
PDLIM5-202ENST00000318007 NOTCH4Q99466 2003 aa16.01■□□□□ 0.15
PDLIM5-202ENST00000318007 ZNF185O15231 689 aa16.01■□□□□ 0.15
PDLIM5-202ENST00000318007 CD48P09326 243 aa16.01■□□□□ 0.15
PDLIM5-202ENST00000318007 TBX4P57082 545 aa16.01■□□□□ 0.15
PDLIM5-202ENST00000318007 SND1Q7KZF4 910 aaKnown RBP eCLIP16.01■□□□□ 0.15
PDLIM5-202ENST00000318007 CAPZA3Q96KX2 299 aa16.01■□□□□ 0.15
PDLIM5-202ENST00000318007 NAPGQ99747 312 aaPredicted RBP16.01■□□□□ 0.15
PDLIM5-202ENST00000318007 SNRNP25Q9BV90 132 aaKnown RBP16.01■□□□□ 0.15
PDLIM5-202ENST00000318007 ADAM7Q9H2U9 754 aa16.01■□□□□ 0.15
PDLIM5-202ENST00000318007 SMARCAL1Q9NZC9 954 aa16.01■□□□□ 0.15
PDLIM5-202ENST00000318007 KRT1P04264 644 aa16■□□□□ 0.15
PDLIM5-202ENST00000318007 RARAP10276 462 aa16■□□□□ 0.15
PDLIM5-202ENST00000318007 GBP1P32455 592 aa16■□□□□ 0.15
PDLIM5-202ENST00000318007 AVPR1AP37288 418 aa16■□□□□ 0.15
PDLIM5-202ENST00000318007 SLC1A1P43005 524 aa16■□□□□ 0.15
PDLIM5-202ENST00000318007 NUMBP49757 651 aa16■□□□□ 0.15
PDLIM5-202ENST00000318007 ODF2Q5BJF6 829 aa16■□□□□ 0.15
PDLIM5-202ENST00000318007 PRSS36Q5K4E3 855 aa16■□□□□ 0.15
PDLIM5-202ENST00000318007 DCAF12L1Q5VU92 463 aa16■□□□□ 0.15
PDLIM5-202ENST00000318007 CYP4V2Q6ZWL3 525 aaPredicted RBP16■□□□□ 0.15
PDLIM5-202ENST00000318007 STRADAQ7RTN6 431 aa16■□□□□ 0.15
PDLIM5-202ENST00000318007 ADAT2Q7Z6V5 191 aaKnown RBP16■□□□□ 0.15
PDLIM5-202ENST00000318007 RHOT1Q8IXI2 618 aa16■□□□□ 0.15
PDLIM5-202ENST00000318007 CENPIQ92674 756 aaPredicted RBP16■□□□□ 0.15
PDLIM5-202ENST00000318007 CD101Q93033 1021 aa16■□□□□ 0.15
PDLIM5-202ENST00000318007 DHX35Q9H5Z1 703 aaKnown RBP16■□□□□ 0.15
PDLIM5-202ENST00000318007 OLA1Q9NTK5 396 aaKnown RBP16■□□□□ 0.15
PDLIM5-202ENST00000318007 LRRD1A4D1F6 860 aa16■□□□□ 0.15
PDLIM5-202ENST00000318007 CREB3O43889 395 aa16■□□□□ 0.15
PDLIM5-202ENST00000318007 MAN1A1P33908 653 aa16■□□□□ 0.15
PDLIM5-202ENST00000318007 HADHQ16836 314 aaKnown RBP16■□□□□ 0.15
PDLIM5-202ENST00000318007 SNX30Q5VWJ9 437 aa16■□□□□ 0.15
PDLIM5-202ENST00000318007 CES5AQ6NT32 575 aa16■□□□□ 0.15
PDLIM5-202ENST00000318007 GPR149Q86SP6 731 aa16■□□□□ 0.15
PDLIM5-202ENST00000318007 RAPGEF5Q92565 580 aa16■□□□□ 0.15
PDLIM5-202ENST00000318007 HES6Q96HZ4 224 aa16■□□□□ 0.15
PDLIM5-202ENST00000318007 CALN1Q9BXU9 219 aa16■□□□□ 0.15
PDLIM5-202ENST00000318007 AP4E1Q9UPM8 1137 aa16■□□□□ 0.15
PDLIM5-202ENST00000318007 TRAV19A0A0A6YYK7 116 aa15.99■□□□□ 0.15
PDLIM5-202ENST00000318007 TRDMT1O14717 391 aaKnown RBP15.99■□□□□ 0.15
PDLIM5-202ENST00000318007 DDX3YO15523 660 aaKnown RBP15.99■□□□□ 0.15
PDLIM5-202ENST00000318007 URI1O94763 535 aaPredicted RBP15.99■□□□□ 0.15
PDLIM5-202ENST00000318007 PRAMEF12O95522 483 aa15.99■□□□□ 0.15
PDLIM5-202ENST00000318007 IGLV3-25P01717 112 aa15.99■□□□□ 0.15
PDLIM5-202ENST00000318007 FSHRP23945 695 aa15.99■□□□□ 0.15
PDLIM5-202ENST00000318007 CCR1P32246 355 aa15.99■□□□□ 0.15
PDLIM5-202ENST00000318007 CTNNA1P35221 906 aaKnown RBP15.99■□□□□ 0.15
PDLIM5-202ENST00000318007 EPHA5P54756 1037 aa15.99■□□□□ 0.15
PDLIM5-202ENST00000318007 MMRN1Q13201 1228 aa15.99■□□□□ 0.15
PDLIM5-202ENST00000318007 KCTD19Q17RG1 926 aaPredicted RBP15.99■□□□□ 0.15
PDLIM5-202ENST00000318007 CTC1Q2NKJ3 1217 aa15.99■□□□□ 0.15
PDLIM5-202ENST00000318007 ARHGAP15Q53QZ3 475 aa15.99■□□□□ 0.15
PDLIM5-202ENST00000318007 KAZNQ674X7 775 aa15.99■□□□□ 0.15
PDLIM5-202ENST00000318007 TMEM184AQ6ZMB5 413 aa15.99■□□□□ 0.15
PDLIM5-202ENST00000318007 ANKS1BQ7Z6G8 1248 aa15.99■□□□□ 0.15
PDLIM5-202ENST00000318007 DENND1CQ8IV53 801 aa15.99■□□□□ 0.15
PDLIM5-202ENST00000318007 COG1Q8WTW3 980 aa15.99■□□□□ 0.15
PDLIM5-202ENST00000318007 BHMTQ93088 406 aa15.99■□□□□ 0.15
PDLIM5-202ENST00000318007 PABPC5Q96DU9 382 aaKnown RBP15.99■□□□□ 0.15
PDLIM5-202ENST00000318007 MS4A14Q96JA4 679 aa15.99■□□□□ 0.15
PDLIM5-202ENST00000318007 RRAGDQ9NQL2 400 aaPredicted RBP15.99■□□□□ 0.15
PDLIM5-202ENST00000318007 TLR6Q9Y2C9 796 aa15.99■□□□□ 0.15
PDLIM5-202ENST00000318007 TRIOO75962 3097 aa15.99■□□□□ 0.15
PDLIM5-202ENST00000318007 FAM72CH0Y354 149 aa15.98■□□□□ 0.15
PDLIM5-202ENST00000318007 C1RP00736 705 aa15.98■□□□□ 0.15
PDLIM5-202ENST00000318007 PYGMP11217 842 aa15.98■□□□□ 0.15
PDLIM5-202ENST00000318007 PCK1P35558 622 aa15.98■□□□□ 0.15
PDLIM5-202ENST00000318007 PPP3CCP48454 512 aa15.98■□□□□ 0.15
PDLIM5-202ENST00000318007 VCPP55072 806 aaKnown RBP15.98■□□□□ 0.15
PDLIM5-202ENST00000318007 CDH6P55285 790 aa15.98■□□□□ 0.15
PDLIM5-202ENST00000318007 FAM72AQ5TYM5 149 aa15.98■□□□□ 0.15
PDLIM5-202ENST00000318007 FAM72DQ6L9T8 149 aa15.98■□□□□ 0.15
PDLIM5-202ENST00000318007 MSANTD2Q6P1R3 559 aa15.98■□□□□ 0.15
PDLIM5-202ENST00000318007 RTL10Q7L3V2 364 aa15.98■□□□□ 0.15
PDLIM5-202ENST00000318007 BNIPLQ7Z465 357 aa15.98■□□□□ 0.15
PDLIM5-202ENST00000318007 TADA2BQ86TJ2 420 aa15.98■□□□□ 0.15
PDLIM5-202ENST00000318007 FAM72BQ86X60 149 aa15.98■□□□□ 0.15
PDLIM5-202ENST00000318007 CMTM8Q8IZV2 173 aa15.98■□□□□ 0.15
PDLIM5-202ENST00000318007 UBL4BQ8N7F7 174 aa15.98■□□□□ 0.15
PDLIM5-202ENST00000318007 KCTD6Q8NC69 237 aa15.98■□□□□ 0.15
PDLIM5-202ENST00000318007 FGF13Q92913 245 aa15.98■□□□□ 0.15
PDLIM5-202ENST00000318007 HEMGNQ9BXL5 484 aa15.98■□□□□ 0.15
PDLIM5-202ENST00000318007 GOLGA6L7A0A1B0GV03 622 aa15.98■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms