RNA–Protein interactions for RNA: ENST00000316707.10

PTPN13-201, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPN13, Length 7,546 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-201ENST00000316707 SF3B1O75533 1304 aaKnown RBP eCLIP4.92□□□□□ -1.62
PTPN13-201ENST00000316707 DDX39AO00148 427 aaKnown RBP4.92□□□□□ -1.62
PTPN13-201ENST00000316707 VILLO15195 856 aa4.92□□□□□ -1.62
PTPN13-201ENST00000316707 BMP10O95393 424 aa4.92□□□□□ -1.62
PTPN13-201ENST00000316707 CAPNS1P04632 268 aa4.92□□□□□ -1.62
PTPN13-201ENST00000316707 PSAPP07602 524 aa4.92□□□□□ -1.62
PTPN13-201ENST00000316707 HSPA8P11142 646 aaKnown RBP4.92□□□□□ -1.62
PTPN13-201ENST00000316707 GP5P40197 560 aa4.92□□□□□ -1.62
PTPN13-201ENST00000316707 GRIA2P42262 883 aa4.92□□□□□ -1.62
PTPN13-201ENST00000316707 ALDH3B2P48448 385 aa4.92□□□□□ -1.62
PTPN13-201ENST00000316707 EMP3P54852 163 aa4.92□□□□□ -1.62
PTPN13-201ENST00000316707 GDF10P55107 478 aa4.92□□□□□ -1.62
PTPN13-201ENST00000316707 ABCE1P61221 599 aaKnown RBP4.92□□□□□ -1.62
PTPN13-201ENST00000316707 PRKAA1Q13131 559 aa4.92□□□□□ -1.62
PTPN13-201ENST00000316707 TICAM1Q8IUC6 712 aa4.92□□□□□ -1.62
PTPN13-201ENST00000316707 POU5F2Q8N7G0 328 aa4.92□□□□□ -1.62
PTPN13-201ENST00000316707 RDH11Q8TC12 318 aa4.92□□□□□ -1.62
PTPN13-201ENST00000316707 DQX1Q8TE96 717 aaKnown RBP4.92□□□□□ -1.62
PTPN13-201ENST00000316707 KBTBD7Q8WVZ9 684 aa4.92□□□□□ -1.62
PTPN13-201ENST00000316707 WDR83Q9BRX9 315 aaKnown RBP4.92□□□□□ -1.62
PTPN13-201ENST00000316707 MSTO1Q9BUK6 570 aa4.92□□□□□ -1.62
PTPN13-201ENST00000316707 SENP6Q9GZR1 1112 aaPredicted RBP4.92□□□□□ -1.62
PTPN13-201ENST00000316707 MAF1Q9H063 256 aa4.92□□□□□ -1.62
PTPN13-201ENST00000316707 C12orf65Q9H3J6 166 aaKnown RBP4.92□□□□□ -1.62
PTPN13-201ENST00000316707 AGO4Q9HCK5 861 aaKnown RBP4.92□□□□□ -1.62
PTPN13-201ENST00000316707 G3BP2Q9UN86 482 aaKnown RBP4.92□□□□□ -1.62
PTPN13-201ENST00000316707 KANSL1LA0AUZ9 987 aa4.92□□□□□ -1.62
PTPN13-201ENST00000316707 K7ERI5 159 aa4.92□□□□□ -1.62
PTPN13-201ENST00000316707 SMIM18P0DKX4 95 aa4.92□□□□□ -1.62
PTPN13-201ENST00000316707 C7P10643 843 aa4.92□□□□□ -1.62
PTPN13-201ENST00000316707 MCF2P10911 925 aa4.92□□□□□ -1.62
PTPN13-201ENST00000316707 RFC1P35251 1148 aaPredicted RBP4.92□□□□□ -1.62
PTPN13-201ENST00000316707 CDH6P55285 790 aa4.92□□□□□ -1.62
PTPN13-201ENST00000316707 MYLK3Q32MK0 819 aa4.92□□□□□ -1.62
PTPN13-201ENST00000316707 C2CD6Q53TS8 623 aa4.92□□□□□ -1.62
PTPN13-201ENST00000316707 UNC5AQ6ZN44 842 aa4.92□□□□□ -1.62
PTPN13-201ENST00000316707 NEK10Q6ZWH5 1172 aa4.92□□□□□ -1.62
PTPN13-201ENST00000316707 FRA10AC1Q70Z53 315 aa4.92□□□□□ -1.62
PTPN13-201ENST00000316707 GPR141Q7Z602 305 aa4.92□□□□□ -1.62
PTPN13-201ENST00000316707 TTC30AQ86WT1 665 aa4.92□□□□□ -1.62
PTPN13-201ENST00000316707 WDR49Q8IV35 697 aa4.92□□□□□ -1.62
PTPN13-201ENST00000316707 CHERPQ8IWX8 916 aaKnown RBP4.92□□□□□ -1.62
PTPN13-201ENST00000316707 PNPT1Q8TCS8 783 aaKnown RBP4.92□□□□□ -1.62
PTPN13-201ENST00000316707 CSRNP1Q96S65 589 aa4.92□□□□□ -1.62
PTPN13-201ENST00000316707 EBF4Q9BQW3 602 aa4.92□□□□□ -1.62
PTPN13-201ENST00000316707 YTHDF1Q9BYJ9 559 aaKnown RBP4.92□□□□□ -1.62
PTPN13-201ENST00000316707 POLLQ9UGP5 575 aa4.92□□□□□ -1.62
PTPN13-201ENST00000316707 CDH7Q9ULB5 785 aa4.92□□□□□ -1.62
PTPN13-201ENST00000316707 KIAA1257Q9ULG3 409 aa4.92□□□□□ -1.62
PTPN13-201ENST00000316707 SLC8A2Q9UPR5 921 aa4.92□□□□□ -1.62
PTPN13-201ENST00000316707 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP4.92□□□□□ -1.62
PTPN13-201ENST00000316707 KLRG2A4D1S0 409 aaPredicted RBP4.92□□□□□ -1.62
PTPN13-201ENST00000316707 TADA2AO75478 443 aa4.92□□□□□ -1.62
PTPN13-201ENST00000316707 TRPA1O75762 1119 aa4.92□□□□□ -1.62
PTPN13-201ENST00000316707 ICAM1P05362 532 aa4.92□□□□□ -1.62
PTPN13-201ENST00000316707 KITP10721 976 aa4.92□□□□□ -1.62
PTPN13-201ENST00000316707 DNAJB1P25685 340 aa4.92□□□□□ -1.62
PTPN13-201ENST00000316707 EFNA5P52803 228 aa4.92□□□□□ -1.62
PTPN13-201ENST00000316707 BMPR2Q13873 1038 aa4.92□□□□□ -1.62
PTPN13-201ENST00000316707 UBAP2LQ14157 1087 aaKnown RBP4.92□□□□□ -1.62
PTPN13-201ENST00000316707 IYDQ6PHW0 289 aa4.92□□□□□ -1.62
PTPN13-201ENST00000316707 UBR7Q8N806 425 aa4.92□□□□□ -1.62
PTPN13-201ENST00000316707 USP6NLQ92738 828 aa4.92□□□□□ -1.62
PTPN13-201ENST00000316707 CFAP36Q96G28 342 aa4.92□□□□□ -1.62
PTPN13-201ENST00000316707 SIGLEC10Q96LC7 697 aa4.92□□□□□ -1.62
PTPN13-201ENST00000316707 CLK4Q9HAZ1 481 aaKnown RBP4.92□□□□□ -1.62
PTPN13-201ENST00000316707 GIN1Q9NXP7 522 aa4.92□□□□□ -1.62
PTPN13-201ENST00000316707 MOCS1Q9NZB8 636 aa4.92□□□□□ -1.62
PTPN13-201ENST00000316707 BARX2Q9UMQ3 279 aaPredicted RBP4.92□□□□□ -1.62
PTPN13-201ENST00000316707 E5RJQ4 531 aa4.92□□□□□ -1.62
PTPN13-201ENST00000316707 GDF11O95390 407 aa4.92□□□□□ -1.62
PTPN13-201ENST00000316707 DNAJB2P25686 324 aa4.92□□□□□ -1.62
PTPN13-201ENST00000316707 GALK1P51570 392 aa4.92□□□□□ -1.62
PTPN13-201ENST00000316707 KPNA2P52292 529 aaKnown RBP4.92□□□□□ -1.62
PTPN13-201ENST00000316707 RPL10AP62906 217 aaKnown RBP4.92□□□□□ -1.62
PTPN13-201ENST00000316707 TUBB3Q13509 450 aa4.92□□□□□ -1.62
PTPN13-201ENST00000316707 RALGPS1Q5JS13 557 aa4.92□□□□□ -1.62
PTPN13-201ENST00000316707 IRAK1BP1Q5VVH5 260 aa4.92□□□□□ -1.62
PTPN13-201ENST00000316707 LLGL2Q6P1M3 1020 aa4.92□□□□□ -1.62
PTPN13-201ENST00000316707 TSHZ1Q6ZSZ6 1077 aa4.92□□□□□ -1.62
PTPN13-201ENST00000316707 CERS5Q8N5B7 392 aa4.92□□□□□ -1.62
PTPN13-201ENST00000316707 GOLM1Q8NBJ4 401 aa4.92□□□□□ -1.62
PTPN13-201ENST00000316707 DEPDC1BQ8WUY9 529 aa4.92□□□□□ -1.62
PTPN13-201ENST00000316707 PDZD7Q9H5P4 517 aa4.92□□□□□ -1.62
PTPN13-201ENST00000316707 UTP3Q9NQZ2 479 aaKnown RBP eCLIP4.92□□□□□ -1.62
PTPN13-201ENST00000316707 CCPG1Q9ULG6 757 aa4.92□□□□□ -1.62
PTPN13-201ENST00000316707 TTLL3Q9Y4R7 772 aa4.92□□□□□ -1.62
PTPN13-201ENST00000316707 TMEM221A6NGB7 291 aa4.92□□□□□ -1.62
PTPN13-201ENST00000316707 TRIM38O00635 465 aa4.92□□□□□ -1.62
PTPN13-201ENST00000316707 BANF1O75531 89 aa4.92□□□□□ -1.62
PTPN13-201ENST00000316707 PHKA2P46019 1235 aa4.92□□□□□ -1.62
PTPN13-201ENST00000316707 UBXN2AP68543 259 aa4.92□□□□□ -1.62
PTPN13-201ENST00000316707 ART3Q13508 389 aa4.92□□□□□ -1.62
PTPN13-201ENST00000316707 DUOXA2Q1HG44 320 aa4.92□□□□□ -1.62
PTPN13-201ENST00000316707 ZBED5Q49AG3 693 aa4.92□□□□□ -1.62
PTPN13-201ENST00000316707 HSF5Q4G112 596 aaPredicted RBP4.92□□□□□ -1.62
PTPN13-201ENST00000316707 MROH9Q5TGP6 573 aa4.92□□□□□ -1.62
PTPN13-201ENST00000316707 STRIP1Q5VSL9 837 aa4.92□□□□□ -1.62
PTPN13-201ENST00000316707 TDRD10Q5VZ19 366 aaKnown RBP4.92□□□□□ -1.62
PTPN13-201ENST00000316707 CDAN1Q8IWY9 1227 aa4.92□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms