RNA–Protein interactions for RNA: ENST00000315962.8

TRIM55-202, Transcript of tripartite motif containing 55, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM55, Length 2,914 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55-202ENST00000315962 CKAP2Q8WWK9 683 aa7.89□□□□□ -1.15
TRIM55-202ENST00000315962 OSBPL1AQ9BXW6 950 aa7.89□□□□□ -1.15
TRIM55-202ENST00000315962 SLC4A5Q9BY07 1137 aa7.89□□□□□ -1.15
TRIM55-202ENST00000315962 VPS37BQ9H9H4 285 aa7.89□□□□□ -1.15
TRIM55-202ENST00000315962 NPHS2Q9NP85 383 aa7.89□□□□□ -1.15
TRIM55-202ENST00000315962 ANLNQ9NQW6 1124 aa7.89□□□□□ -1.15
TRIM55-202ENST00000315962 CHKBQ9Y259 395 aa7.89□□□□□ -1.15
TRIM55-202ENST00000315962 SIP14410 1827 aa7.89□□□□□ -1.15
TRIM55-202ENST00000315962 KCNN4O15554 427 aa7.89□□□□□ -1.15
TRIM55-202ENST00000315962 KIF1CO43896 1103 aaKnown RBP7.89□□□□□ -1.15
TRIM55-202ENST00000315962 DDHD2O94830 711 aa7.89□□□□□ -1.15
TRIM55-202ENST00000315962 GSTA1P08263 222 aa7.89□□□□□ -1.15
TRIM55-202ENST00000315962 RPA3P35244 121 aaPredicted RBP7.89□□□□□ -1.15
TRIM55-202ENST00000315962 PCK1P35558 622 aa7.89□□□□□ -1.15
TRIM55-202ENST00000315962 OR1G1P47890 313 aa7.89□□□□□ -1.15
TRIM55-202ENST00000315962 CPA2P48052 419 aa7.89□□□□□ -1.15
TRIM55-202ENST00000315962 BCAT1P54687 386 aa7.89□□□□□ -1.15
TRIM55-202ENST00000315962 VCPP55072 806 aaKnown RBP7.89□□□□□ -1.15
TRIM55-202ENST00000315962 TAP1Q03518 808 aa7.89□□□□□ -1.15
TRIM55-202ENST00000315962 SLC10A2Q12908 348 aaPredicted RBP7.89□□□□□ -1.15
TRIM55-202ENST00000315962 PPP2R5EQ16537 467 aa7.89□□□□□ -1.15
TRIM55-202ENST00000315962 GALNTL6Q49A17 601 aa7.89□□□□□ -1.15
TRIM55-202ENST00000315962 FAM117BQ6P1L5 589 aa7.89□□□□□ -1.15
TRIM55-202ENST00000315962 LONP2Q86WA8 852 aa7.89□□□□□ -1.15
TRIM55-202ENST00000315962 SIX6OS1Q8N1H7 587 aa7.89□□□□□ -1.15
TRIM55-202ENST00000315962 C12orf50Q8NA57 414 aaPredicted RBP7.89□□□□□ -1.15
TRIM55-202ENST00000315962 PCDH19Q8TAB3 1148 aa7.89□□□□□ -1.15
TRIM55-202ENST00000315962 CCDC110Q8TBZ0 833 aa7.89□□□□□ -1.15
TRIM55-202ENST00000315962 TNIP3Q96KP6 325 aa7.89□□□□□ -1.15
TRIM55-202ENST00000315962 LGMNQ99538 433 aa7.89□□□□□ -1.15
TRIM55-202ENST00000315962 SYT15Q9BQS2 421 aa7.89□□□□□ -1.15
TRIM55-202ENST00000315962 ULBP1Q9BZM6 244 aa7.89□□□□□ -1.15
TRIM55-202ENST00000315962 WDR35Q9P2L0 1181 aa7.89□□□□□ -1.15
TRIM55-202ENST00000315962 SH3BP1Q9Y3L3 701 aa7.89□□□□□ -1.15
TRIM55-202ENST00000315962 ANK1P16157 1881 aa7.88□□□□□ -1.15
TRIM55-202ENST00000315962 KIAA0100Q14667 2235 aaKnown RBP7.88□□□□□ -1.15
TRIM55-202ENST00000315962 A0A0U1RQF3 1178 aa7.88□□□□□ -1.15
TRIM55-202ENST00000315962 EXOC1LA0A1B0GW35 172 aa7.88□□□□□ -1.15
TRIM55-202ENST00000315962 A0A1W2PQ45 241 aaPredicted RBP7.88□□□□□ -1.15
TRIM55-202ENST00000315962 A0A1W2PQY0 241 aa7.88□□□□□ -1.15
TRIM55-202ENST00000315962 FAM72CH0Y354 149 aa7.88□□□□□ -1.15
TRIM55-202ENST00000315962 XPOTO43592 962 aaKnown RBP7.88□□□□□ -1.15
TRIM55-202ENST00000315962 ALDH1A1P00352 501 aa7.88□□□□□ -1.15
TRIM55-202ENST00000315962 NPR3P17342 541 aa7.88□□□□□ -1.15
TRIM55-202ENST00000315962 ITIH2P19823 946 aa7.88□□□□□ -1.15
TRIM55-202ENST00000315962 CYP2F1P24903 491 aa7.88□□□□□ -1.15
TRIM55-202ENST00000315962 RBL1P28749 1068 aa7.88□□□□□ -1.15
TRIM55-202ENST00000315962 SSTR1P30872 391 aa7.88□□□□□ -1.15
TRIM55-202ENST00000315962 MAN1A1P33908 653 aa7.88□□□□□ -1.15
TRIM55-202ENST00000315962 RPL22P35268 128 aaKnown RBP7.88□□□□□ -1.15
TRIM55-202ENST00000315962 SULT1E1P49888 294 aa7.88□□□□□ -1.15
TRIM55-202ENST00000315962 PDIA2Q13087 525 aaKnown RBP7.88□□□□□ -1.15
TRIM55-202ENST00000315962 PTK6Q13882 451 aa7.88□□□□□ -1.15
TRIM55-202ENST00000315962 OASLQ15646 514 aaKnown RBP7.88□□□□□ -1.15
TRIM55-202ENST00000315962 SLC1A5Q15758 541 aa7.88□□□□□ -1.15
TRIM55-202ENST00000315962 CLUL1Q15846 466 aa7.88□□□□□ -1.15
TRIM55-202ENST00000315962 FNBP1LQ5T0N5 605 aa7.88□□□□□ -1.15
TRIM55-202ENST00000315962 FAM72AQ5TYM5 149 aa7.88□□□□□ -1.15
TRIM55-202ENST00000315962 FAM72DQ6L9T8 149 aa7.88□□□□□ -1.15
TRIM55-202ENST00000315962 DEFB128Q7Z7B8 93 aa7.88□□□□□ -1.15
TRIM55-202ENST00000315962 FAM72BQ86X60 149 aa7.88□□□□□ -1.15
TRIM55-202ENST00000315962 CRYBG2Q8N1P7 616 aa7.88□□□□□ -1.15
TRIM55-202ENST00000315962 ALLCQ8N6M5 410 aa7.88□□□□□ -1.15
TRIM55-202ENST00000315962 PLD5Q8N7P1 536 aa7.88□□□□□ -1.15
TRIM55-202ENST00000315962 NIPA2Q8N8Q9 360 aa7.88□□□□□ -1.15
TRIM55-202ENST00000315962 KLHDC9Q8NEP7 349 aa7.88□□□□□ -1.15
TRIM55-202ENST00000315962 CMASQ8NFW8 434 aaPredicted RBP7.88□□□□□ -1.15
TRIM55-202ENST00000315962 OR10T2Q8NGX3 314 aa7.88□□□□□ -1.15
TRIM55-202ENST00000315962 GRK7Q8WTQ7 553 aa7.88□□□□□ -1.15
TRIM55-202ENST00000315962 DEFB118Q96PH6 123 aa7.88□□□□□ -1.15
TRIM55-202ENST00000315962 SMOQ99835 787 aa7.88□□□□□ -1.15
TRIM55-202ENST00000315962 TRAIPQ9BWF2 469 aa7.88□□□□□ -1.15
TRIM55-202ENST00000315962 PPP1R12CQ9BZL4 782 aa7.88□□□□□ -1.15
TRIM55-202ENST00000315962 SLTMQ9NWH9 1034 aaKnown RBP eCLIP7.88□□□□□ -1.15
TRIM55-202ENST00000315962 GDAP2Q9NXN4 497 aa7.88□□□□□ -1.15
TRIM55-202ENST00000315962 SEPT10Q9P0V9 454 aa7.88□□□□□ -1.15
TRIM55-202ENST00000315962 PHTF1Q9UMS5 762 aa7.88□□□□□ -1.15
TRIM55-202ENST00000315962 DERAQ9Y315 318 aa7.88□□□□□ -1.15
TRIM55-202ENST00000315962 PTCH2Q9Y6C5 1203 aa7.88□□□□□ -1.15
TRIM55-202ENST00000315962 TTC3P53804 2025 aa7.88□□□□□ -1.15
TRIM55-202ENST00000315962 CFAP73A6NFT4 308 aa7.88□□□□□ -1.15
TRIM55-202ENST00000315962 I6L893 689 aaPredicted RBP7.88□□□□□ -1.15
TRIM55-202ENST00000315962 F7P08709 466 aaPredicted RBP7.88□□□□□ -1.15
TRIM55-202ENST00000315962 CA4P22748 312 aa7.88□□□□□ -1.15
TRIM55-202ENST00000315962 GPR15P49685 360 aa7.88□□□□□ -1.15
TRIM55-202ENST00000315962 DRG2P55039 364 aaKnown RBP7.88□□□□□ -1.15
TRIM55-202ENST00000315962 YWHAZP63104 245 aaKnown RBP7.88□□□□□ -1.15
TRIM55-202ENST00000315962 SATB1Q01826 763 aa7.88□□□□□ -1.15
TRIM55-202ENST00000315962 MGAT3Q09327 533 aa7.88□□□□□ -1.15
TRIM55-202ENST00000315962 OLIG2Q13516 323 aa7.88□□□□□ -1.15
TRIM55-202ENST00000315962 BBS9Q3SYG4 887 aa7.88□□□□□ -1.15
TRIM55-202ENST00000315962 LHX8Q68G74 356 aa7.88□□□□□ -1.15
TRIM55-202ENST00000315962 SCN4BQ8IWT1 228 aa7.88□□□□□ -1.15
TRIM55-202ENST00000315962 TTC9BQ8N6N2 239 aa7.88□□□□□ -1.15
TRIM55-202ENST00000315962 PQLC3Q8N755 202 aa7.88□□□□□ -1.15
TRIM55-202ENST00000315962 ZMIZ2Q8NF64 920 aa7.88□□□□□ -1.15
TRIM55-202ENST00000315962 SPDYE1Q8NFV5 336 aaPredicted RBP7.88□□□□□ -1.15
TRIM55-202ENST00000315962 DEPDC1BQ8WUY9 529 aa7.88□□□□□ -1.15
TRIM55-202ENST00000315962 DUSP16Q9BY84 665 aa7.88□□□□□ -1.15
TRIM55-202ENST00000315962 SIK2Q9H0K1 926 aa7.88□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms