RNA–Protein interactions for RNA: ENST00000314045.11

DDX54-202, Transcript of DEAD-box helicase 54, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene DDX54, Length 4,380 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-202ENST00000314045 FLT3P36888 993 aa14.1□□□□□ -0.15
DDX54-202ENST00000314045 IRAK1P51617 712 aa14.1□□□□□ -0.15
DDX54-202ENST00000314045 PCDHGC3Q9UN70 934 aa14.1□□□□□ -0.15
DDX54-202ENST00000314045 COG5Q9UP83 839 aa14.1□□□□□ -0.15
DDX54-202ENST00000314045 SLC10A3P09131 477 aa14.09□□□□□ -0.15
DDX54-202ENST00000314045 RENBPP51606 427 aa14.09□□□□□ -0.15
DDX54-202ENST00000314045 ZNF135P52742 658 aaPredicted RBP14.09□□□□□ -0.15
DDX54-202ENST00000314045 SEC24CP53992 1094 aa14.09□□□□□ -0.15
DDX54-202ENST00000314045 PURAQ00577 322 aaKnown RBP14.09□□□□□ -0.15
DDX54-202ENST00000314045 PTK6Q13882 451 aa14.09□□□□□ -0.15
DDX54-202ENST00000314045 DDR2Q16832 855 aa14.09□□□□□ -0.15
DDX54-202ENST00000314045 ANKRD20A8PQ5CZ79 823 aa14.09□□□□□ -0.15
DDX54-202ENST00000314045 MON1BQ7L1V2 547 aa14.09□□□□□ -0.15
DDX54-202ENST00000314045 TSPAN17Q96FV3 270 aa14.09□□□□□ -0.15
DDX54-202ENST00000314045 XRN2Q9H0D6 950 aaKnown RBP eCLIP14.09□□□□□ -0.156e-7■■□□□ 12.6
DDX54-202ENST00000314045 EPN3Q9H201 632 aa14.09□□□□□ -0.15
DDX54-202ENST00000314045 ACTR5Q9H9F9 607 aaPredicted RBP14.09□□□□□ -0.15
DDX54-202ENST00000314045 GFAPP14136 432 aa14.09□□□□□ -0.15
DDX54-202ENST00000314045 KRT4P19013 534 aa14.09□□□□□ -0.15
DDX54-202ENST00000314045 GJA5P36382 358 aa14.09□□□□□ -0.15
DDX54-202ENST00000314045 ATP5C1P36542 298 aaKnown RBP14.09□□□□□ -0.15
DDX54-202ENST00000314045 ELK3P41970 407 aa14.09□□□□□ -0.15
DDX54-202ENST00000314045 PLD1Q13393 1074 aa14.09□□□□□ -0.15
DDX54-202ENST00000314045 MAP7Q14244 749 aa14.09□□□□□ -0.15
DDX54-202ENST00000314045 POLD3Q15054 466 aaPredicted RBP14.09□□□□□ -0.15
DDX54-202ENST00000314045 RBBP5Q15291 538 aaKnown RBP14.09□□□□□ -0.15
DDX54-202ENST00000314045 FAM187BQ17R55 369 aa14.09□□□□□ -0.15
DDX54-202ENST00000314045 CDCA2Q69YH5 1023 aaPredicted RBP14.09□□□□□ -0.15
DDX54-202ENST00000314045 NUP93Q8N1F7 819 aa14.09□□□□□ -0.15
DDX54-202ENST00000314045 AGR3Q8TD06 166 aa14.09□□□□□ -0.15
DDX54-202ENST00000314045 DCUN1D1Q96GG9 259 aa14.09□□□□□ -0.15
DDX54-202ENST00000314045 RNF39Q9H2S5 420 aa14.09□□□□□ -0.15
DDX54-202ENST00000314045 PCYOX1Q9UHG3 505 aa14.09□□□□□ -0.15
DDX54-202ENST00000314045 DPP7Q9UHL4 492 aa14.09□□□□□ -0.15
DDX54-202ENST00000314045 EIF3HO15372 352 aaKnown RBP eCLIP14.09□□□□□ -0.15
DDX54-202ENST00000314045 TSPAN3O60637 253 aa14.09□□□□□ -0.15
DDX54-202ENST00000314045 PDAP1Q13442 181 aaKnown RBP14.09□□□□□ -0.15
DDX54-202ENST00000314045 ARHGEF7Q14155 803 aa14.09□□□□□ -0.15
DDX54-202ENST00000314045 PMF1Q6P1K2 205 aa14.09□□□□□ -0.15
DDX54-202ENST00000314045 NPNTQ6UXI9 565 aa14.09□□□□□ -0.15
DDX54-202ENST00000314045 ACAD11Q709F0 780 aa14.09□□□□□ -0.15
DDX54-202ENST00000314045 LGI2Q8N0V4 545 aa14.09□□□□□ -0.15
DDX54-202ENST00000314045 ULK4Q96C45 1275 aa14.09□□□□□ -0.15
DDX54-202ENST00000314045 C16orf70Q9BSU1 422 aa14.09□□□□□ -0.15
DDX54-202ENST00000314045 FICDQ9BVA6 458 aa14.09□□□□□ -0.15
DDX54-202ENST00000314045 BRD8Q9H0E9 1235 aa14.09□□□□□ -0.15
DDX54-202ENST00000314045 TASP1Q9H6P5 420 aa14.09□□□□□ -0.15
DDX54-202ENST00000314045 LRRC19Q9H756 370 aa14.09□□□□□ -0.15
DDX54-202ENST00000314045 GABRQQ9UN88 632 aa14.09□□□□□ -0.15
DDX54-202ENST00000314045 STXBP5LQ9Y2K9 1186 aa14.09□□□□□ -0.15
DDX54-202ENST00000314045 DNAJC6O75061 913 aa14.08□□□□□ -0.15
DDX54-202ENST00000314045 OR1D2P34982 312 aa14.08□□□□□ -0.15
DDX54-202ENST00000314045 KRT33BQ14525 404 aa14.08□□□□□ -0.15
DDX54-202ENST00000314045 PSMD5Q16401 504 aa14.08□□□□□ -0.15
DDX54-202ENST00000314045 TSNAXIP1Q2TAA8 658 aa14.08□□□□□ -0.15
DDX54-202ENST00000314045 MAMDC4Q6UXC1 1216 aa14.08□□□□□ -0.15
DDX54-202ENST00000314045 DHX30Q7L2E3 1194 aaKnown RBP eCLIP14.08□□□□□ -0.15
DDX54-202ENST00000314045 HERC6Q8IVU3 1022 aa14.08□□□□□ -0.15
DDX54-202ENST00000314045 AENQ8WTP8 325 aaKnown RBP14.08□□□□□ -0.15
DDX54-202ENST00000314045 GRID1Q9ULK0 1009 aa14.08□□□□□ -0.15
DDX54-202ENST00000314045 hCG_1818297A0A087WSY0 165 aa14.08□□□□□ -0.16
DDX54-202ENST00000314045 OR6C75A6NL08 312 aa14.08□□□□□ -0.16
DDX54-202ENST00000314045 SMIM24O75264 130 aa14.08□□□□□ -0.16
DDX54-202ENST00000314045 CYP2C18P33260 490 aa14.08□□□□□ -0.16
DDX54-202ENST00000314045 STX3Q13277 289 aa14.08□□□□□ -0.16
DDX54-202ENST00000314045 GDF6Q6KF10 455 aaPredicted RBP14.08□□□□□ -0.16
DDX54-202ENST00000314045 LVRNQ6Q4G3 990 aa14.08□□□□□ -0.16
DDX54-202ENST00000314045 ATAD1Q8NBU5 361 aa14.08□□□□□ -0.16
DDX54-202ENST00000314045 EMILIN2Q9BXX0 1053 aa14.08□□□□□ -0.16
DDX54-202ENST00000314045 NRDE2Q9H7Z3 1164 aa14.08□□□□□ -0.16
DDX54-202ENST00000314045 TMBIM4Q9HC24 238 aa14.08□□□□□ -0.16
DDX54-202ENST00000314045 AFF4Q9UHB7 1163 aaKnown RBP14.08□□□□□ -0.16
DDX54-202ENST00000314045 DRG1Q9Y295 367 aaKnown RBP14.08□□□□□ -0.16
DDX54-202ENST00000314045 CARNS1A5YM72 827 aa14.08□□□□□ -0.16
DDX54-202ENST00000314045 LIASO43766 372 aa14.08□□□□□ -0.16
DDX54-202ENST00000314045 GNRH1P01148 92 aa14.08□□□□□ -0.16
DDX54-202ENST00000314045 OR4Q2P0C623 313 aa14.08□□□□□ -0.16
DDX54-202ENST00000314045 SCNN1BP51168 640 aa14.08□□□□□ -0.16
DDX54-202ENST00000314045 ART3Q13508 389 aa14.08□□□□□ -0.16
DDX54-202ENST00000314045 DPYSL3Q14195 570 aa14.08□□□□□ -0.16
DDX54-202ENST00000314045 ASTE1Q2TB18 679 aaPredicted RBP14.08□□□□□ -0.16
DDX54-202ENST00000314045 NECAB2Q7Z6G3 386 aa14.08□□□□□ -0.16
DDX54-202ENST00000314045 FAM228AQ86W67 206 aa14.08□□□□□ -0.16
DDX54-202ENST00000314045 XYLT1Q86Y38 959 aa14.08□□□□□ -0.16
DDX54-202ENST00000314045 TTPALQ9BTX7 342 aa14.08□□□□□ -0.16
DDX54-202ENST00000314045 TRIM54Q9BYV2 358 aa14.08□□□□□ -0.16
DDX54-202ENST00000314045 UXTQ9UBK9 157 aaPredicted RBP14.08□□□□□ -0.16
DDX54-202ENST00000314045 SCN7AQ01118 1682 aa14.08□□□□□ -0.16
DDX54-202ENST00000314045 HACD1B0YJ81 288 aa14.08□□□□□ -0.16
DDX54-202ENST00000314045 CFLARO15519 480 aa14.08□□□□□ -0.16
DDX54-202ENST00000314045 CYP1A1P04798 512 aaPredicted RBP14.08□□□□□ -0.16
DDX54-202ENST00000314045 ETS1P14921 441 aa14.08□□□□□ -0.16
DDX54-202ENST00000314045 CASP2P42575 452 aa14.08□□□□□ -0.16
DDX54-202ENST00000314045 LRRC43Q8N309 656 aa14.08□□□□□ -0.16
DDX54-202ENST00000314045 FIBCD1Q8N539 461 aa14.08□□□□□ -0.16
DDX54-202ENST00000314045 PAFAH2Q99487 392 aa14.08□□□□□ -0.16
DDX54-202ENST00000314045 NFKBIZQ9BYH8 718 aa14.08□□□□□ -0.16
DDX54-202ENST00000314045 UBXN6Q9BZV1 441 aa14.08□□□□□ -0.16
DDX54-202ENST00000314045 HACD3Q9P035 362 aa14.08□□□□□ -0.16
DDX54-202ENST00000314045 ZFP69BQ9UJL9 534 aa14.08□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms