RNA–Protein interactions for RNA: ENST00000312438.7

CLCF1-201, Transcript of cardiotrophin like cytokine factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CLCF1, Length 1,844 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCF1-201ENST00000312438 LBX1P52954 281 aa17.33■□□□□ 0.37
CLCF1-201ENST00000312438 USP41Q3LFD5 358 aa17.33■□□□□ 0.37
CLCF1-201ENST00000312438 RNASEH2BQ5TBB1 312 aaKnown RBP17.33■□□□□ 0.37
CLCF1-201ENST00000312438 DENND2CQ68D51 928 aa17.33■□□□□ 0.37
CLCF1-201ENST00000312438 NCBP2-AS2Q69YL0 99 aa17.33■□□□□ 0.37
CLCF1-201ENST00000312438 SCD5Q86SK9 330 aa17.33■□□□□ 0.37
CLCF1-201ENST00000312438 TAC4Q86UU9 113 aa17.33■□□□□ 0.37
CLCF1-201ENST00000312438 RELL1Q8IUW5 271 aa17.33■□□□□ 0.37
CLCF1-201ENST00000312438 ARHGAP18Q8N392 663 aa17.33■□□□□ 0.37
CLCF1-201ENST00000312438 ZCCHC9Q8N567 271 aaKnown RBP17.33■□□□□ 0.37
CLCF1-201ENST00000312438 BCL7CQ8WUZ0 217 aaPredicted RBP17.33■□□□□ 0.37
CLCF1-201ENST00000312438 TRIM43Q96BQ3 446 aaPredicted RBP17.33■□□□□ 0.37
CLCF1-201ENST00000312438 IGSF21Q96ID5 467 aa17.33■□□□□ 0.37
CLCF1-201ENST00000312438 TMEM106CQ9BVX2 250 aa17.33■□□□□ 0.37
CLCF1-201ENST00000312438 EPB41L4BQ9H329 900 aa17.33■□□□□ 0.37
CLCF1-201ENST00000312438 ARHGEF4Q9NR80 690 aa17.33■□□□□ 0.37
CLCF1-201ENST00000312438 IL37Q9NZH6 218 aa17.33■□□□□ 0.37
CLCF1-201ENST00000312438 MTMR11A4FU01 709 aa17.33■□□□□ 0.36
CLCF1-201ENST00000312438 SMAPO00193 183 aa17.33■□□□□ 0.36
CLCF1-201ENST00000312438 EEF2KO00418 725 aaKnown RBP17.33■□□□□ 0.36
CLCF1-201ENST00000312438 CREB3O43889 395 aa17.33■□□□□ 0.36
CLCF1-201ENST00000312438 IGLV3-25P01717 112 aa17.33■□□□□ 0.36
CLCF1-201ENST00000312438 CSF2RAP15509 400 aa17.33■□□□□ 0.36
CLCF1-201ENST00000312438 RAG1P15918 1043 aa17.33■□□□□ 0.36
CLCF1-201ENST00000312438 ITGB8P26012 769 aa17.33■□□□□ 0.36
CLCF1-201ENST00000312438 GBE1Q04446 702 aa17.33■□□□□ 0.36
CLCF1-201ENST00000312438 IFFO1Q0D2I5 559 aa17.33■□□□□ 0.36
CLCF1-201ENST00000312438 SLC10A2Q12908 348 aaPredicted RBP17.33■□□□□ 0.36
CLCF1-201ENST00000312438 EIF4EBP2Q13542 120 aaPredicted RBP17.33■□□□□ 0.36
CLCF1-201ENST00000312438 SLC29A2Q14542 456 aa17.33■□□□□ 0.36
CLCF1-201ENST00000312438 RSPO2Q6UXX9 243 aaPredicted RBP17.33■□□□□ 0.36
CLCF1-201ENST00000312438 RFX8Q6ZV50 586 aa17.33■□□□□ 0.36
CLCF1-201ENST00000312438 CDKL3Q8IVW4 592 aaPredicted RBP17.33■□□□□ 0.36
CLCF1-201ENST00000312438 PPIL6Q8IXY8 311 aa17.33■□□□□ 0.36
CLCF1-201ENST00000312438 TMEM199Q8N511 208 aa17.33■□□□□ 0.36
CLCF1-201ENST00000312438 OR2W6PQ8NHA6 318 aa17.33■□□□□ 0.36
CLCF1-201ENST00000312438 RNF34Q969K3 372 aa17.33■□□□□ 0.36
CLCF1-201ENST00000312438 ZNF689Q96CS4 500 aaPredicted RBP17.33■□□□□ 0.36
CLCF1-201ENST00000312438 RTP4Q96DX8 246 aa17.33■□□□□ 0.36
CLCF1-201ENST00000312438 TKTL2Q9H0I9 626 aa17.33■□□□□ 0.36
CLCF1-201ENST00000312438 PRDM5Q9NQX1 630 aaPredicted RBP17.33■□□□□ 0.36
CLCF1-201ENST00000312438 SHOC2Q9UQ13 582 aa17.33■□□□□ 0.36
CLCF1-201ENST00000312438 TET1Q8NFU7 2136 aa17.32■□□□□ 0.36
CLCF1-201ENST00000312438 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP17.32■□□□□ 0.36
CLCF1-201ENST00000312438 RIPK2O43353 540 aa17.32■□□□□ 0.36
CLCF1-201ENST00000312438 MYZAPP0CAP1 466 aa17.32■□□□□ 0.36
CLCF1-201ENST00000312438 GPR15P49685 360 aa17.32■□□□□ 0.36
CLCF1-201ENST00000312438 CTCFP49711 727 aaPredicted RBP17.32■□□□□ 0.36
CLCF1-201ENST00000312438 ZNF844Q08AG5 666 aa17.32■□□□□ 0.36
CLCF1-201ENST00000312438 SDHAF4Q5VUM1 108 aa17.32■□□□□ 0.36
CLCF1-201ENST00000312438 MFSD5Q6N075 450 aa17.32■□□□□ 0.36
CLCF1-201ENST00000312438 RNF19BQ6ZMZ0 732 aa17.32■□□□□ 0.36
CLCF1-201ENST00000312438 ARL8AQ96BM9 186 aa17.32■□□□□ 0.36
CLCF1-201ENST00000312438 SPATA17Q96L03 361 aa17.32■□□□□ 0.36
CLCF1-201ENST00000312438 ANLNQ9NQW6 1124 aa17.32■□□□□ 0.36
CLCF1-201ENST00000312438 COMMD8Q9NX08 183 aa17.32■□□□□ 0.36
CLCF1-201ENST00000312438 BACE2Q9Y5Z0 518 aa17.32■□□□□ 0.36
CLCF1-201ENST00000312438 A0A1W2PQH9 124 aa17.31■□□□□ 0.36
CLCF1-201ENST00000312438 KCNN4O15554 427 aa17.31■□□□□ 0.36
CLCF1-201ENST00000312438 RTN3O95197 1032 aaPredicted RBP17.31■□□□□ 0.36
CLCF1-201ENST00000312438 HAPLN1P10915 354 aaPredicted RBP17.31■□□□□ 0.36
CLCF1-201ENST00000312438 RBL1P28749 1068 aa17.31■□□□□ 0.36
CLCF1-201ENST00000312438 SEMA3BQ13214 749 aa17.31■□□□□ 0.36
CLCF1-201ENST00000312438 MGAT5BQ3V5L5 792 aa17.31■□□□□ 0.36
CLCF1-201ENST00000312438 BRMS1LQ5PSV4 323 aa17.31■□□□□ 0.36
CLCF1-201ENST00000312438 SPOUT1Q5T280 376 aaKnown RBP17.31■□□□□ 0.36
CLCF1-201ENST00000312438 SLC8B1Q6J4K2 584 aa17.31■□□□□ 0.36
CLCF1-201ENST00000312438 KCNT2Q6UVM3 1135 aa17.31■□□□□ 0.36
CLCF1-201ENST00000312438 C4orf22Q6V702 233 aa17.31■□□□□ 0.36
CLCF1-201ENST00000312438 DENND5BQ6ZUT9 1274 aa17.31■□□□□ 0.36
CLCF1-201ENST00000312438 B4GALNT4Q76KP1 1039 aa17.31■□□□□ 0.36
CLCF1-201ENST00000312438 HOOK3Q86VS8 718 aa17.31■□□□□ 0.36
CLCF1-201ENST00000312438 RNF168Q8IYW5 571 aaPredicted RBP17.31■□□□□ 0.36
CLCF1-201ENST00000312438 FBXO22Q8NEZ5 403 aa17.31■□□□□ 0.36
CLCF1-201ENST00000312438 CDC42EP4Q9H3Q1 356 aaKnown RBP17.31■□□□□ 0.36
CLCF1-201ENST00000312438 SMOC2Q9H3U7 446 aa17.31■□□□□ 0.36
CLCF1-201ENST00000312438 TMBIM4Q9HC24 238 aa17.31■□□□□ 0.36
CLCF1-201ENST00000312438 ETNK2Q9NVF9 386 aa17.31■□□□□ 0.36
CLCF1-201ENST00000312438 DTLQ9NZJ0 730 aa17.31■□□□□ 0.36
CLCF1-201ENST00000312438 PAK5Q9P286 719 aa17.31■□□□□ 0.36
CLCF1-201ENST00000312438 MTRRQ9UBK8 725 aa17.31■□□□□ 0.36
CLCF1-201ENST00000312438 SLC27A5Q9Y2P5 690 aa17.31■□□□□ 0.36
CLCF1-201ENST00000312438 FARP1Q9Y4F1 1045 aaPredicted RBP17.31■□□□□ 0.36
CLCF1-201ENST00000312438 FAM92AA1XBS5 289 aa17.31■□□□□ 0.36
CLCF1-201ENST00000312438 CARNS1A5YM72 827 aa17.31■□□□□ 0.36
CLCF1-201ENST00000312438 GOLGA6CA6NDK9 693 aa17.31■□□□□ 0.36
CLCF1-201ENST00000312438 HACD1B0YJ81 288 aa17.31■□□□□ 0.36
CLCF1-201ENST00000312438 I6L893 689 aaPredicted RBP17.31■□□□□ 0.36
CLCF1-201ENST00000312438 IRAK2O43187 625 aa17.31■□□□□ 0.36
CLCF1-201ENST00000312438 TTC4O95801 387 aa17.31■□□□□ 0.36
CLCF1-201ENST00000312438 GOLGA6DP0CG33 693 aa17.31■□□□□ 0.36
CLCF1-201ENST00000312438 YWHAQP27348 245 aa17.31■□□□□ 0.36
CLCF1-201ENST00000312438 RPL10AP62906 217 aaKnown RBP17.31■□□□□ 0.36
CLCF1-201ENST00000312438 GABPB1Q06547 395 aaPredicted RBP17.31■□□□□ 0.36
CLCF1-201ENST00000312438 DPYSQ14117 519 aa17.31■□□□□ 0.36
CLCF1-201ENST00000312438 PAFAH1B3Q15102 231 aaKnown RBP17.31■□□□□ 0.36
CLCF1-201ENST00000312438 SLC45A4Q5BKX6 768 aa17.31■□□□□ 0.36
CLCF1-201ENST00000312438 KIAA1841Q6NSI8 718 aa17.31■□□□□ 0.36
CLCF1-201ENST00000312438 PRSS55Q6UWB4 352 aaPredicted RBP17.31■□□□□ 0.36
CLCF1-201ENST00000312438 PDZD4Q76G19 769 aaPredicted RBP17.31■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms