RNA–Protein interactions for RNA: ENST00000311943.11

SCFD1-201, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 2,016 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-201ENST00000311943 ETFBKMTQ8IXQ9 262 aa12.55□□□□□ -0.4
SCFD1-201ENST00000311943 SCML4Q8N228 414 aa12.55□□□□□ -0.4
SCFD1-201ENST00000311943 CCDC33Q8N5R6 958 aa12.55□□□□□ -0.4
SCFD1-201ENST00000311943 TMEM35BQ8NCS4 154 aa12.55□□□□□ -0.4
SCFD1-201ENST00000311943 IRGQQ8WZA9 623 aa12.55□□□□□ -0.4
SCFD1-201ENST00000311943 CFAP57Q96MR6 1250 aa12.55□□□□□ -0.4
SCFD1-201ENST00000311943 ACOX2Q99424 681 aa12.55□□□□□ -0.4
SCFD1-201ENST00000311943 AGPAT1Q99943 283 aa12.55□□□□□ -0.4
SCFD1-201ENST00000311943 NUCKS1Q9H1E3 243 aaKnown RBP12.55□□□□□ -0.4
SCFD1-201ENST00000311943 HAUS4Q9H6D7 363 aa12.55□□□□□ -0.4
SCFD1-201ENST00000311943 SYNCQ9H7C4 482 aa12.55□□□□□ -0.4
SCFD1-201ENST00000311943 C8orf33Q9H7E9 229 aaPredicted RBP12.55□□□□□ -0.4
SCFD1-201ENST00000311943 CACNA1HO95180 2353 aa12.55□□□□□ -0.4
SCFD1-201ENST00000311943 WASH3PC4AMC7 463 aa12.55□□□□□ -0.4
SCFD1-201ENST00000311943 PRRT4C9JH25 899 aa12.55□□□□□ -0.4
SCFD1-201ENST00000311943 CAPN9O14815 690 aa12.55□□□□□ -0.4
SCFD1-201ENST00000311943 NFATC1O95644 943 aa12.55□□□□□ -0.4
SCFD1-201ENST00000311943 TRUB2O95900 331 aaKnown RBP12.55□□□□□ -0.4
SCFD1-201ENST00000311943 CHRM1P11229 460 aaPredicted RBP12.55□□□□□ -0.4
SCFD1-201ENST00000311943 ZNF445P59923 1031 aa12.55□□□□□ -0.4
SCFD1-201ENST00000311943 SLC6A3Q01959 620 aa12.55□□□□□ -0.4
SCFD1-201ENST00000311943 FILIP1LQ4L180 1135 aa12.55□□□□□ -0.4
SCFD1-201ENST00000311943 FAM133BQ5BKY9 247 aaKnown RBP12.55□□□□□ -0.4
SCFD1-201ENST00000311943 FAM102AQ5T9C2 384 aaPredicted RBP12.55□□□□□ -0.4
SCFD1-201ENST00000311943 FYB2Q5VWT5 728 aa12.55□□□□□ -0.4
SCFD1-201ENST00000311943 MSANTD2Q6P1R3 559 aa12.55□□□□□ -0.4
SCFD1-201ENST00000311943 CIR1Q86X95 450 aaPredicted RBP12.55□□□□□ -0.4
SCFD1-201ENST00000311943 C1orf210Q8IVY1 113 aa12.55□□□□□ -0.4
SCFD1-201ENST00000311943 ARHGAP18Q8N392 663 aa12.55□□□□□ -0.4
SCFD1-201ENST00000311943 SORCS1Q8WY21 1168 aa12.55□□□□□ -0.4
SCFD1-201ENST00000311943 CD101Q93033 1021 aa12.55□□□□□ -0.4
SCFD1-201ENST00000311943 PRICKLE1Q96MT3 831 aaPredicted RBP12.55□□□□□ -0.4
SCFD1-201ENST00000311943 POPDC2Q9HBU9 364 aa12.55□□□□□ -0.4
SCFD1-201ENST00000311943 METTL5Q9NRN9 209 aaKnown RBP12.55□□□□□ -0.4
SCFD1-201ENST00000311943 A0A1W2PQC6 194 aa12.54□□□□□ -0.4
SCFD1-201ENST00000311943 MAN2B1O00754 1011 aa12.54□□□□□ -0.4
SCFD1-201ENST00000311943 GALR2O43603 387 aaPredicted RBP12.54□□□□□ -0.4
SCFD1-201ENST00000311943 IGLV3-27P01718 113 aa12.54□□□□□ -0.4
SCFD1-201ENST00000311943 CASP14P31944 242 aa12.54□□□□□ -0.4
SCFD1-201ENST00000311943 ACADSBP45954 432 aa12.54□□□□□ -0.4
SCFD1-201ENST00000311943 TBX4P57082 545 aa12.54□□□□□ -0.4
SCFD1-201ENST00000311943 BPIFB4P59827 614 aa12.54□□□□□ -0.4
SCFD1-201ENST00000311943 RPS24P62847 133 aaKnown RBP12.54□□□□□ -0.4
SCFD1-201ENST00000311943 COG7P83436 770 aa12.54□□□□□ -0.4
SCFD1-201ENST00000311943 EIF4EBP2Q13542 120 aaPredicted RBP12.54□□□□□ -0.4
SCFD1-201ENST00000311943 GEN1Q17RS7 908 aa12.54□□□□□ -0.4
SCFD1-201ENST00000311943 C15orf59Q2T9L4 293 aaPredicted RBP12.54□□□□□ -0.4
SCFD1-201ENST00000311943 HEATR6Q6AI08 1181 aaKnown RBP12.54□□□□□ -0.4
SCFD1-201ENST00000311943 ZNF276Q8N554 614 aa12.54□□□□□ -0.4
SCFD1-201ENST00000311943 RPLP0P6Q8NHW5 317 aa12.54□□□□□ -0.4
SCFD1-201ENST00000311943 C18orf8Q96DM3 657 aa12.54□□□□□ -0.4
SCFD1-201ENST00000311943 SLC39A13Q96H72 371 aa12.54□□□□□ -0.4
SCFD1-201ENST00000311943 SLC2A13Q96QE2 648 aa12.54□□□□□ -0.4
SCFD1-201ENST00000311943 TBCBQ99426 244 aa12.54□□□□□ -0.4
SCFD1-201ENST00000311943 TRIM7Q9C029 511 aa12.54□□□□□ -0.4
SCFD1-201ENST00000311943 PIGVQ9NUD9 493 aa12.54□□□□□ -0.4
SCFD1-201ENST00000311943 STRIP2Q9ULQ0 834 aa12.54□□□□□ -0.4
SCFD1-201ENST00000311943 DNAH14Q0VDD8 3507 aa12.54□□□□□ -0.4
SCFD1-201ENST00000311943 CFAP54Q96N23 3096 aa12.54□□□□□ -0.4
SCFD1-201ENST00000311943 DDX3XO00571 662 aaKnown RBP eCLIP12.54□□□□□ -0.41e-13■■■■□ 23.8
SCFD1-201ENST00000311943 FBXO21O94952 628 aa12.54□□□□□ -0.4
SCFD1-201ENST00000311943 IGLV3-25P01717 112 aa12.54□□□□□ -0.4
SCFD1-201ENST00000311943 MMP8P22894 467 aa12.54□□□□□ -0.4
SCFD1-201ENST00000311943 TIE1P35590 1138 aa12.54□□□□□ -0.4
SCFD1-201ENST00000311943 CSTF1Q05048 431 aaKnown RBP12.54□□□□□ -0.4
SCFD1-201ENST00000311943 CLEC16AQ2KHT3 1053 aa12.54□□□□□ -0.4
SCFD1-201ENST00000311943 HGSNATQ68CP4 663 aa12.54□□□□□ -0.4
SCFD1-201ENST00000311943 TMEM215Q68D42 235 aa12.54□□□□□ -0.4
SCFD1-201ENST00000311943 CHRDQ9H2X0 955 aa12.54□□□□□ -0.4
SCFD1-201ENST00000311943 DNAJC17Q9NVM6 304 aaKnown RBP12.54□□□□□ -0.4
SCFD1-201ENST00000311943 DDIT4Q9NX09 232 aa12.54□□□□□ -0.4
SCFD1-201ENST00000311943 STIM2Q9P246 746 aa12.54□□□□□ -0.4
SCFD1-201ENST00000311943 TBC1D14Q9P2M4 693 aa12.54□□□□□ -0.4
SCFD1-201ENST00000311943 TMEM59LQ9UK28 342 aa12.54□□□□□ -0.4
SCFD1-201ENST00000311943 M0QYT0 321 aa12.53□□□□□ -0.4
SCFD1-201ENST00000311943 IRAK2O43187 625 aa12.53□□□□□ -0.4
SCFD1-201ENST00000311943 KAT7O95251 611 aa12.53□□□□□ -0.4
SCFD1-201ENST00000311943 CISD3P0C7P0 127 aa12.53□□□□□ -0.4
SCFD1-201ENST00000311943 GABRB2P47870 512 aa12.53□□□□□ -0.4
SCFD1-201ENST00000311943 RPL7AP62424 266 aaKnown RBP12.53□□□□□ -0.4
SCFD1-201ENST00000311943 ATP11AP98196 1134 aa12.53□□□□□ -0.4
SCFD1-201ENST00000311943 NHLH1Q02575 133 aa12.53□□□□□ -0.4
SCFD1-201ENST00000311943 MAPK8IP2Q13387 824 aaPredicted RBP12.53□□□□□ -0.4
SCFD1-201ENST00000311943 MEA1Q16626 185 aa12.53□□□□□ -0.4
SCFD1-201ENST00000311943 CDO1Q16878 200 aa12.53□□□□□ -0.4
SCFD1-201ENST00000311943 DAB2IPQ5VWQ8 1189 aa12.53□□□□□ -0.4
SCFD1-201ENST00000311943 RAP1GAP2Q684P5 730 aa12.53□□□□□ -0.4
SCFD1-201ENST00000311943 DDX42Q86XP3 938 aaKnown RBP eCLIP12.53□□□□□ -0.4
SCFD1-201ENST00000311943 ARHGEF4Q9NR80 690 aa12.53□□□□□ -0.4
SCFD1-201ENST00000311943 LSM7Q9UK45 103 aaKnown RBP12.53□□□□□ -0.4
SCFD1-201ENST00000311943 HCN4Q9Y3Q4 1203 aa12.53□□□□□ -0.4
SCFD1-201ENST00000311943 MYO18AQ92614 2054 aaKnown RBP12.53□□□□□ -0.4
SCFD1-201ENST00000311943 GFRA2O00451 464 aa12.52□□□□□ -0.4
SCFD1-201ENST00000311943 ADCY5O95622 1261 aa12.52□□□□□ -0.4
SCFD1-201ENST00000311943 RRM1P23921 792 aa12.52□□□□□ -0.4
SCFD1-201ENST00000311943 RFC1P35251 1148 aaPredicted RBP12.52□□□□□ -0.4
SCFD1-201ENST00000311943 OGDHQ02218 1023 aa12.52□□□□□ -0.4
SCFD1-201ENST00000311943 GAD2Q05329 585 aa12.52□□□□□ -0.4
SCFD1-201ENST00000311943 GRSF1Q12849 480 aaKnown RBP eCLIP12.52□□□□□ -0.4
SCFD1-201ENST00000311943 ASIC2Q16515 512 aa12.52□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms