RNA–Protein interactions for RNA: ENST00000310546.2

SPSB4-201, Transcript of splA/ryanodine receptor domain and SOCS box containing 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPSB4, Length 2,908 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPSB4-201ENST00000310546 HAUS8Q9BT25 410 aa18.61■□□□□ 0.57
SPSB4-201ENST00000310546 PARVAQ9NVD7 372 aa18.61■□□□□ 0.57
SPSB4-201ENST00000310546 MYH9P35579 1960 aaKnown RBP18.61■□□□□ 0.57
SPSB4-201ENST00000310546 CSDE1O75534 798 aaKnown RBP18.61■□□□□ 0.57
SPSB4-201ENST00000310546 RFPL1O75677 317 aa18.61■□□□□ 0.57
SPSB4-201ENST00000310546 ATP5BP06576 529 aaKnown RBP18.61■□□□□ 0.57
SPSB4-201ENST00000310546 PEX3P56589 373 aa18.61■□□□□ 0.57
SPSB4-201ENST00000310546 KCNT1Q5JUK3 1230 aa18.61■□□□□ 0.57
SPSB4-201ENST00000310546 PLEKHA7Q6IQ23 1121 aa18.61■□□□□ 0.57
SPSB4-201ENST00000310546 DCUN1D2Q6PH85 259 aa18.61■□□□□ 0.57
SPSB4-201ENST00000310546 FASTKD5Q7L8L6 764 aaKnown RBP18.61■□□□□ 0.57
SPSB4-201ENST00000310546 KCTD17Q8N5Z5 321 aa18.61■□□□□ 0.57
SPSB4-201ENST00000310546 RNF148Q8N7C7 305 aa18.61■□□□□ 0.57
SPSB4-201ENST00000310546 GMCL1Q96IK5 515 aa18.61■□□□□ 0.57
SPSB4-201ENST00000310546 UNC45AQ9H3U1 944 aa18.61■□□□□ 0.57
SPSB4-201ENST00000310546 NRDE2Q9H7Z3 1164 aa18.61■□□□□ 0.57
SPSB4-201ENST00000310546 COQ6Q9Y2Z9 468 aa18.61■□□□□ 0.57
SPSB4-201ENST00000310546 COQ4Q9Y3A0 265 aa18.61■□□□□ 0.57
SPSB4-201ENST00000310546 CPA3P15088 417 aa18.6■□□□□ 0.57
SPSB4-201ENST00000310546 KCNA4P22459 653 aa18.6■□□□□ 0.57
SPSB4-201ENST00000310546 PHKA2P46019 1235 aa18.6■□□□□ 0.57
SPSB4-201ENST00000310546 FLOT2Q14254 428 aa18.6■□□□□ 0.57
SPSB4-201ENST00000310546 NLRP7Q8WX94 980 aa18.6■□□□□ 0.57
SPSB4-201ENST00000310546 NUF2Q9BZD4 464 aa18.6■□□□□ 0.57
SPSB4-201ENST00000310546 GPRC5CQ9NQ84 441 aa18.6■□□□□ 0.57
SPSB4-201ENST00000310546 TBC1D23Q9NUY8 699 aa18.6■□□□□ 0.57
SPSB4-201ENST00000310546 ARHGAP26Q9UNA1 814 aa18.6■□□□□ 0.57
SPSB4-201ENST00000310546 FUOMA2VDF0 154 aa18.6■□□□□ 0.57
SPSB4-201ENST00000310546 AIM2O14862 343 aa18.6■□□□□ 0.57
SPSB4-201ENST00000310546 PMM2O15305 246 aa18.6■□□□□ 0.57
SPSB4-201ENST00000310546 OCM2P0CE71 109 aa18.6■□□□□ 0.57
SPSB4-201ENST00000310546 OCMP0CE72 109 aaPredicted RBP18.6■□□□□ 0.57
SPSB4-201ENST00000310546 ZNF23P17027 643 aa18.6■□□□□ 0.57
SPSB4-201ENST00000310546 TMED10P49755 219 aaKnown RBP18.6■□□□□ 0.57
SPSB4-201ENST00000310546 STAT2P52630 851 aa18.6■□□□□ 0.57
SPSB4-201ENST00000310546 RPL10AP62906 217 aaKnown RBP18.6■□□□□ 0.57
SPSB4-201ENST00000310546 NOMO3P69849 1222 aa18.6■□□□□ 0.57
SPSB4-201ENST00000310546 ADGRE1Q14246 886 aa18.6■□□□□ 0.57
SPSB4-201ENST00000310546 FER1L6Q2WGJ9 1857 aa18.6■□□□□ 0.57
SPSB4-201ENST00000310546 FASTKD1Q53R41 847 aaKnown RBP18.6■□□□□ 0.57
SPSB4-201ENST00000310546 SPOPLQ6IQ16 392 aa18.6■□□□□ 0.57
SPSB4-201ENST00000310546 C17orf50Q8WW18 174 aa18.6■□□□□ 0.57
SPSB4-201ENST00000310546 KIFC3Q9BVG8 833 aa18.6■□□□□ 0.57
SPSB4-201ENST00000310546 TRIM17Q9Y577 477 aa18.6■□□□□ 0.57
SPSB4-201ENST00000310546 MATN2O00339 956 aa18.6■□□□□ 0.57
SPSB4-201ENST00000310546 ADAM23O75077 832 aa18.6■□□□□ 0.57
SPSB4-201ENST00000310546 MFSD4BQ5TF39 518 aa18.6■□□□□ 0.57
SPSB4-201ENST00000310546 C16orf46Q6P387 395 aa18.6■□□□□ 0.57
SPSB4-201ENST00000310546 TMEM270Q6UE05 265 aa18.6■□□□□ 0.57
SPSB4-201ENST00000310546 LILRA2Q8N149 483 aa18.6■□□□□ 0.57
SPSB4-201ENST00000310546 RNF169Q8NCN4 708 aa18.6■□□□□ 0.57
SPSB4-201ENST00000310546 WRNIP1Q96S55 665 aa18.6■□□□□ 0.57
SPSB4-201ENST00000310546 HNRNPABQ99729 332 aaKnown RBP18.6■□□□□ 0.57
SPSB4-201ENST00000310546 MAN1C1Q9NR34 630 aa18.6■□□□□ 0.57
SPSB4-201ENST00000310546 PNPOQ9NVS9 261 aa18.6■□□□□ 0.57
SPSB4-201ENST00000310546 COL2A1P02458 1487 aaPredicted RBP18.59■□□□□ 0.57
SPSB4-201ENST00000310546 NUP107P57740 925 aa18.59■□□□□ 0.57
SPSB4-201ENST00000310546 GCNT1Q02742 428 aa18.59■□□□□ 0.57
SPSB4-201ENST00000310546 SPP2Q13103 211 aa18.59■□□□□ 0.57
SPSB4-201ENST00000310546 LGSNQ5TDP6 509 aa18.59■□□□□ 0.57
SPSB4-201ENST00000310546 C12orf56Q8IXR9 622 aa18.59■□□□□ 0.57
SPSB4-201ENST00000310546 CPNE9Q8IYJ1 553 aa18.59■□□□□ 0.57
SPSB4-201ENST00000310546 ERLEC1Q96DZ1 483 aa18.59■□□□□ 0.57
SPSB4-201ENST00000310546 BIRC8Q96P09 236 aa18.59■□□□□ 0.57
SPSB4-201ENST00000310546 TSC22D4Q9Y3Q8 395 aa18.59■□□□□ 0.57
SPSB4-201ENST00000310546 NOP56O00567 594 aaKnown RBP18.59■□□□□ 0.57
SPSB4-201ENST00000310546 SLC1A6P48664 564 aa18.59■□□□□ 0.57
SPSB4-201ENST00000310546 IDH3AP50213 366 aa18.59■□□□□ 0.57
SPSB4-201ENST00000310546 CDK18Q07002 472 aa18.59■□□□□ 0.57
SPSB4-201ENST00000310546 ZNF252P-AS1Q0IIN9 211 aa18.59■□□□□ 0.57
SPSB4-201ENST00000310546 USP41Q3LFD5 358 aa18.59■□□□□ 0.57
SPSB4-201ENST00000310546 PLA2G4FQ68DD2 849 aa18.59■□□□□ 0.57
SPSB4-201ENST00000310546 TEPSINQ96N21 525 aa18.59■□□□□ 0.57
SPSB4-201ENST00000310546 PPP1R10Q96QC0 940 aaKnown RBP18.59■□□□□ 0.57
SPSB4-201ENST00000310546 ZNF577Q9BSK1 485 aa18.59■□□□□ 0.57
SPSB4-201ENST00000310546 EBF1Q9UH73 591 aa18.59■□□□□ 0.57
SPSB4-201ENST00000310546 ZNHIT2Q9UHR6 403 aa18.59■□□□□ 0.57
SPSB4-201ENST00000310546 TEX264Q9Y6I9 313 aa18.59■□□□□ 0.57
SPSB4-201ENST00000310546 ZHX2Q9Y6X8 837 aa18.59■□□□□ 0.57
SPSB4-201ENST00000310546 TMEM150BA6NC51 233 aa18.58■□□□□ 0.57
SPSB4-201ENST00000310546 P4HBP07237 508 aaKnown RBP18.58■□□□□ 0.57
SPSB4-201ENST00000310546 GNA15P30679 374 aa18.58■□□□□ 0.57
SPSB4-201ENST00000310546 ATP1A4Q13733 1029 aa18.58■□□□□ 0.57
SPSB4-201ENST00000310546 ZNF362Q5T0B9 420 aaPredicted RBP18.58■□□□□ 0.57
SPSB4-201ENST00000310546 MAVSQ7Z434 540 aa18.58■□□□□ 0.57
SPSB4-201ENST00000310546 ZNF677Q86XU0 584 aa18.58■□□□□ 0.57
SPSB4-201ENST00000310546 CATSPER1Q8NEC5 780 aa18.58■□□□□ 0.57
SPSB4-201ENST00000310546 DEPTORQ8TB45 409 aa18.58■□□□□ 0.57
SPSB4-201ENST00000310546 PKP2Q99959 881 aa18.58■□□□□ 0.57
SPSB4-201ENST00000310546 RIMS3Q9UJD0 308 aa18.58■□□□□ 0.57
SPSB4-201ENST00000310546 KLHL41O60662 606 aa18.58■□□□□ 0.56
SPSB4-201ENST00000310546 GSTT2P0CG29 244 aa18.58■□□□□ 0.56
SPSB4-201ENST00000310546 GSTT2BP0CG30 244 aa18.58■□□□□ 0.56
SPSB4-201ENST00000310546 COX4I1P13073 169 aa18.58■□□□□ 0.56
SPSB4-201ENST00000310546 NUDT2P50583 147 aa18.58■□□□□ 0.56
SPSB4-201ENST00000310546 CLVS1Q8IUQ0 354 aaPredicted RBP18.58■□□□□ 0.56
SPSB4-201ENST00000310546 TRNAU1APQ9NX07 287 aaKnown RBP18.58■□□□□ 0.56
SPSB4-201ENST00000310546 GGA3Q9NZ52 723 aa18.58■□□□□ 0.56
SPSB4-201ENST00000310546 DNAH12Q6ZR08 3092 aa18.58■□□□□ 0.56
SPSB4-201ENST00000310546 TMX2-CTNND1H3BSU7 103 aa18.57■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms