RNA–Protein interactions for RNA: ENST00000307767.12

TVP23B-201, Transcript of trans-golgi network vesicle protein 23 homolog B, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TVP23B, Length 2,064 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23B-201ENST00000307767 SLC44A1Q8WWI5 657 aa17.09■□□□□ 0.33
TVP23B-201ENST00000307767 SIGLEC10Q96LC7 697 aa17.09■□□□□ 0.33
TVP23B-201ENST00000307767 TRIM56Q9BRZ2 755 aaKnown RBP17.09■□□□□ 0.33
TVP23B-201ENST00000307767 RHOBTB2Q9BYZ6 727 aa17.09■□□□□ 0.33
TVP23B-201ENST00000307767 SSU72Q9NP77 194 aaKnown RBP17.09■□□□□ 0.33
TVP23B-201ENST00000307767 RCOR3Q9P2K3 495 aaPredicted RBP17.09■□□□□ 0.33
TVP23B-201ENST00000307767 SMG5Q9UPR3 1016 aaKnown RBP17.09■□□□□ 0.33
TVP23B-201ENST00000307767 FAM72CH0Y354 149 aa17.09■□□□□ 0.33
TVP23B-201ENST00000307767 I3L4J1 428 aa17.09■□□□□ 0.33
TVP23B-201ENST00000307767 M0QYT0 321 aa17.09■□□□□ 0.33
TVP23B-201ENST00000307767 MFSD11O43934 449 aa17.09■□□□□ 0.33
TVP23B-201ENST00000307767 FAM200BP0CF97 657 aa17.09■□□□□ 0.33
TVP23B-201ENST00000307767 DESP17661 470 aa17.09■□□□□ 0.33
TVP23B-201ENST00000307767 KRT4P19013 534 aa17.09■□□□□ 0.33
TVP23B-201ENST00000307767 CCND3P30281 292 aaPredicted RBP17.09■□□□□ 0.33
TVP23B-201ENST00000307767 FAM72AQ5TYM5 149 aa17.09■□□□□ 0.33
TVP23B-201ENST00000307767 FAM72DQ6L9T8 149 aa17.09■□□□□ 0.33
TVP23B-201ENST00000307767 RGS9BPQ6ZS82 235 aa17.09■□□□□ 0.33
TVP23B-201ENST00000307767 FAM72BQ86X60 149 aa17.09■□□□□ 0.33
TVP23B-201ENST00000307767 TMEM86AQ8N2M4 240 aa17.09■□□□□ 0.33
TVP23B-201ENST00000307767 SMC6Q96SB8 1091 aa17.09■□□□□ 0.33
TVP23B-201ENST00000307767 CYTH2Q99418 400 aa17.09■□□□□ 0.33
TVP23B-201ENST00000307767 LGMNQ99538 433 aa17.09■□□□□ 0.33
TVP23B-201ENST00000307767 C12orf65Q9H3J6 166 aaKnown RBP17.09■□□□□ 0.33
TVP23B-201ENST00000307767 LRRC4Q9HBW1 653 aa17.09■□□□□ 0.33
TVP23B-201ENST00000307767 SMYD2Q9NRG4 433 aa17.09■□□□□ 0.33
TVP23B-201ENST00000307767 ABCF3Q9NUQ8 709 aa17.09■□□□□ 0.33
TVP23B-201ENST00000307767 SAMD15Q9P1V8 674 aa17.09■□□□□ 0.33
TVP23B-201ENST00000307767 CAPN7Q9Y6W3 813 aa17.09■□□□□ 0.33
TVP23B-201ENST00000307767 CEP350Q5VT06 3117 aa17.09■□□□□ 0.33
TVP23B-201ENST00000307767 CXorf49A8MYA2 514 aaPredicted RBP17.08■□□□□ 0.33
TVP23B-201ENST00000307767 APRTP07741 180 aa17.08■□□□□ 0.33
TVP23B-201ENST00000307767 GHRP10912 638 aa17.08■□□□□ 0.33
TVP23B-201ENST00000307767 RDXP35241 583 aaKnown RBP17.08■□□□□ 0.33
TVP23B-201ENST00000307767 LHX1P48742 406 aa17.08■□□□□ 0.33
TVP23B-201ENST00000307767 MGAT5Q09328 741 aa17.08■□□□□ 0.33
TVP23B-201ENST00000307767 SEMA3BQ13214 749 aa17.08■□□□□ 0.33
TVP23B-201ENST00000307767 DPYSQ14117 519 aa17.08■□□□□ 0.33
TVP23B-201ENST00000307767 ZKSCAN8Q15776 578 aaPredicted RBP17.08■□□□□ 0.33
TVP23B-201ENST00000307767 KCNA10Q16322 511 aa17.08■□□□□ 0.33
TVP23B-201ENST00000307767 TRIM71Q2Q1W2 868 aaKnown RBP17.08■□□□□ 0.33
TVP23B-201ENST00000307767 RSPH3Q86UC2 560 aa17.08■□□□□ 0.33
TVP23B-201ENST00000307767 MPP5Q8N3R9 675 aa17.08■□□□□ 0.33
TVP23B-201ENST00000307767 BANPQ8N9N5 519 aa17.08■□□□□ 0.33
TVP23B-201ENST00000307767 ANKLE1Q8NAG6 615 aa17.08■□□□□ 0.33
TVP23B-201ENST00000307767 RNF139Q8WU17 664 aa17.08■□□□□ 0.33
TVP23B-201ENST00000307767 PKMYT1Q99640 499 aa17.08■□□□□ 0.33
TVP23B-201ENST00000307767 MED10Q9BTT4 135 aa17.08■□□□□ 0.33
TVP23B-201ENST00000307767 USP15Q9Y4E8 981 aaPredicted RBP17.08■□□□□ 0.33
TVP23B-201ENST00000307767 COL4A4P53420 1690 aaPredicted RBP17.08■□□□□ 0.32
TVP23B-201ENST00000307767 GOLGA6L7A0A1B0GV03 622 aa17.08■□□□□ 0.32
TVP23B-201ENST00000307767 C9IYK1 514 aa17.08■□□□□ 0.32
TVP23B-201ENST00000307767 AP1G2O75843 785 aa17.08■□□□□ 0.32
TVP23B-201ENST00000307767 MSH2P43246 934 aa17.08■□□□□ 0.32
TVP23B-201ENST00000307767 SCTRP47872 440 aa17.08■□□□□ 0.32
TVP23B-201ENST00000307767 FCGRTP55899 365 aa17.08■□□□□ 0.32
TVP23B-201ENST00000307767 SREBF2Q12772 1141 aa17.08■□□□□ 0.32
TVP23B-201ENST00000307767 SEMA5AQ13591 1074 aa17.08■□□□□ 0.32
TVP23B-201ENST00000307767 LPIN1Q14693 890 aa17.08■□□□□ 0.32
TVP23B-201ENST00000307767 MTFR1Q15390 333 aa17.08■□□□□ 0.32
TVP23B-201ENST00000307767 SERAC1Q96JX3 654 aa17.08■□□□□ 0.32
TVP23B-201ENST00000307767 KLF6Q99612 283 aaPredicted RBP17.08■□□□□ 0.32
TVP23B-201ENST00000307767 FRMD8Q9BZ67 464 aaPredicted RBP17.08■□□□□ 0.32
TVP23B-201ENST00000307767 KLC2Q9H0B6 622 aa17.08■□□□□ 0.32
TVP23B-201ENST00000307767 NSRP1Q9H0G5 558 aaKnown RBP17.08■□□□□ 0.32
TVP23B-201ENST00000307767 CSNK1G1Q9HCP0 422 aa17.08■□□□□ 0.32
TVP23B-201ENST00000307767 SYNJ2BP-COX16A0A087WUM0 186 aa17.07■□□□□ 0.32
TVP23B-201ENST00000307767 TMEM88BA6NKF7 163 aa17.07■□□□□ 0.32
TVP23B-201ENST00000307767 DCLK1O15075 740 aa17.07■□□□□ 0.32
TVP23B-201ENST00000307767 GPR182O15218 404 aa17.07■□□□□ 0.32
TVP23B-201ENST00000307767 TPSB2P20231 275 aa17.07■□□□□ 0.32
TVP23B-201ENST00000307767 RPL9P32969 192 aaKnown RBP17.07■□□□□ 0.32
TVP23B-201ENST00000307767 THPOP40225 353 aa17.07■□□□□ 0.32
TVP23B-201ENST00000307767 YWHAGP61981 247 aaKnown RBP eCLIP17.07■□□□□ 0.32
TVP23B-201ENST00000307767 IL9RQ01113 521 aa17.07■□□□□ 0.32
TVP23B-201ENST00000307767 FAAP100Q0VG06 881 aa17.07■□□□□ 0.32
TVP23B-201ENST00000307767 PRKD1Q15139 912 aaPredicted RBP17.07■□□□□ 0.32
TVP23B-201ENST00000307767 TPSAB1Q15661 275 aa17.07■□□□□ 0.32
TVP23B-201ENST00000307767 FBXW10Q5XX13 1052 aa17.07■□□□□ 0.32
TVP23B-201ENST00000307767 SIX6OS1Q8N1H7 587 aa17.07■□□□□ 0.32
TVP23B-201ENST00000307767 ADAM32Q8TC27 787 aa17.07■□□□□ 0.32
TVP23B-201ENST00000307767 HTR3CQ8WXA8 447 aa17.07■□□□□ 0.32
TVP23B-201ENST00000307767 DNAI2Q9GZS0 605 aa17.07■□□□□ 0.32
TVP23B-201ENST00000307767 TMLHEQ9NVH6 421 aa17.07■□□□□ 0.32
TVP23B-201ENST00000307767 COX16Q9P0S2 106 aa17.07■□□□□ 0.32
TVP23B-201ENST00000307767 CDH9Q9ULB4 789 aa17.07■□□□□ 0.32
TVP23B-201ENST00000307767 FAM155BO75949 473 aa17.06■□□□□ 0.32
TVP23B-201ENST00000307767 TOMM70O94826 608 aa17.06■□□□□ 0.32
TVP23B-201ENST00000307767 CA4P22748 312 aa17.06■□□□□ 0.32
TVP23B-201ENST00000307767 PRKCHP24723 683 aa17.06■□□□□ 0.32
TVP23B-201ENST00000307767 ADRA1BP35368 520 aa17.06■□□□□ 0.32
TVP23B-201ENST00000307767 BRCC3P46736 316 aa17.06■□□□□ 0.32
TVP23B-201ENST00000307767 SLC8A3P57103 927 aa17.06■□□□□ 0.32
TVP23B-201ENST00000307767 NME3Q13232 169 aa17.06■□□□□ 0.32
TVP23B-201ENST00000307767 PDK4Q16654 411 aa17.06■□□□□ 0.32
TVP23B-201ENST00000307767 GALNTL6Q49A17 601 aa17.06■□□□□ 0.32
TVP23B-201ENST00000307767 ANKRD20A2Q5SQ80 823 aa17.06■□□□□ 0.32
TVP23B-201ENST00000307767 ANKRD20A1Q5TYW2 823 aa17.06■□□□□ 0.32
TVP23B-201ENST00000307767 ANKRD20A3Q5VUR7 823 aa17.06■□□□□ 0.32
TVP23B-201ENST00000307767 FAM171BQ6P995 826 aa17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms