RNA–Protein interactions for RNA: ENST00000305866.9

VPS50-202, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS50, Length 3,613 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-202ENST00000305866 FRMD7Q6ZUT3 714 aa5.64□□□□□ -1.51
VPS50-202ENST00000305866 PRRT2Q7Z6L0 340 aaPredicted RBP5.64□□□□□ -1.51
VPS50-202ENST00000305866 SCUBE1Q8IWY4 988 aa5.64□□□□□ -1.51
VPS50-202ENST00000305866 PHTF2Q8N3S3 785 aa5.64□□□□□ -1.51
VPS50-202ENST00000305866 SHCBP1Q8NEM2 672 aa5.64□□□□□ -1.51
VPS50-202ENST00000305866 ATG4CQ96DT6 458 aa5.64□□□□□ -1.51
VPS50-202ENST00000305866 CEP170P1Q96L14 293 aa5.64□□□□□ -1.51
VPS50-202ENST00000305866 FAM111AQ96PZ2 611 aa5.64□□□□□ -1.51
VPS50-202ENST00000305866 BTBD9Q96Q07 612 aa5.64□□□□□ -1.51
VPS50-202ENST00000305866 CPXM1Q96SM3 734 aa5.64□□□□□ -1.51
VPS50-202ENST00000305866 KLF6Q99612 283 aaPredicted RBP5.64□□□□□ -1.51
VPS50-202ENST00000305866 DNAJC28Q9NX36 388 aa5.64□□□□□ -1.51
VPS50-202ENST00000305866 DUS2Q9NX74 493 aaKnown RBP5.64□□□□□ -1.51
VPS50-202ENST00000305866 RGS17Q9UGC6 210 aaPredicted RBP5.64□□□□□ -1.51
VPS50-202ENST00000305866 HMGXB4Q9UGU5 601 aa5.64□□□□□ -1.51
VPS50-202ENST00000305866 TAGLN3Q9UI15 199 aa5.64□□□□□ -1.51
VPS50-202ENST00000305866 PADI4Q9UM07 663 aa5.64□□□□□ -1.51
VPS50-202ENST00000305866 SLC45A1Q9Y2W3 748 aa5.64□□□□□ -1.51
VPS50-202ENST00000305866 ZFC3H1O60293 1989 aaKnown RBP5.64□□□□□ -1.51
VPS50-202ENST00000305866 C7orf72A4D263 438 aa5.64□□□□□ -1.51
VPS50-202ENST00000305866 CFAP69A5D8W1 941 aa5.64□□□□□ -1.51
VPS50-202ENST00000305866 G3V3G9 751 aa5.64□□□□□ -1.51
VPS50-202ENST00000305866 APOC4-APOC2K7ER74 178 aa5.64□□□□□ -1.51
VPS50-202ENST00000305866 HGSO14964 777 aaPredicted RBP5.64□□□□□ -1.51
VPS50-202ENST00000305866 TLR3O15455 904 aaKnown RBP5.64□□□□□ -1.51
VPS50-202ENST00000305866 APOC2P02655 101 aa5.64□□□□□ -1.51
VPS50-202ENST00000305866 HMGCRP04035 888 aa5.64□□□□□ -1.51
VPS50-202ENST00000305866 PROCP04070 461 aa5.64□□□□□ -1.51
VPS50-202ENST00000305866 DPEP1P16444 411 aa5.64□□□□□ -1.51
VPS50-202ENST00000305866 CA4P22748 312 aa5.64□□□□□ -1.51
VPS50-202ENST00000305866 NSFP46459 744 aaKnown RBP5.64□□□□□ -1.51
VPS50-202ENST00000305866 RBM5P52756 815 aaKnown RBP eCLIP5.64□□□□□ -1.51
VPS50-202ENST00000305866 DSG1Q02413 1049 aa5.64□□□□□ -1.51
VPS50-202ENST00000305866 MTMR2Q13614 643 aa5.64□□□□□ -1.51
VPS50-202ENST00000305866 ZBTB6Q15916 424 aa5.64□□□□□ -1.51
VPS50-202ENST00000305866 HIF1AQ16665 826 aa5.64□□□□□ -1.51
VPS50-202ENST00000305866 DCAF8Q5TAQ9 597 aa5.64□□□□□ -1.51
VPS50-202ENST00000305866 FAXCQ5TGI0 409 aa5.64□□□□□ -1.51
VPS50-202ENST00000305866 IRAK1BP1Q5VVH5 260 aa5.64□□□□□ -1.51
VPS50-202ENST00000305866 HMBOX1Q6NT76 420 aa5.64□□□□□ -1.51
VPS50-202ENST00000305866 DENND1BQ6P3S1 775 aa5.64□□□□□ -1.51
VPS50-202ENST00000305866 EPGNQ6UW88 154 aa5.64□□□□□ -1.51
VPS50-202ENST00000305866 METTL7BQ6UX53 244 aa5.64□□□□□ -1.51
VPS50-202ENST00000305866 NPNTQ6UXI9 565 aa5.64□□□□□ -1.51
VPS50-202ENST00000305866 ALKAL1Q6UXT8 129 aa5.64□□□□□ -1.51
VPS50-202ENST00000305866 UNC5AQ6ZN44 842 aa5.64□□□□□ -1.51
VPS50-202ENST00000305866 ZNF467Q7Z7K2 595 aaPredicted RBP5.64□□□□□ -1.51
VPS50-202ENST00000305866 CARM1Q86X55 608 aa5.64□□□□□ -1.51
VPS50-202ENST00000305866 PASD1Q8IV76 773 aa5.64□□□□□ -1.51
VPS50-202ENST00000305866 LSMEM2Q8N112 164 aa5.64□□□□□ -1.51
VPS50-202ENST00000305866 GDPD5Q8WTR4 605 aa5.64□□□□□ -1.51
VPS50-202ENST00000305866 PPP2R3CQ969Q6 453 aa5.64□□□□□ -1.51
VPS50-202ENST00000305866 LRRC39Q96DD0 335 aa5.64□□□□□ -1.51
VPS50-202ENST00000305866 KLHL32Q96NJ5 620 aa5.64□□□□□ -1.51
VPS50-202ENST00000305866 PLEKHG4BQ96PX9 1271 aa5.64□□□□□ -1.51
VPS50-202ENST00000305866 SMC6Q96SB8 1091 aa5.64□□□□□ -1.51
VPS50-202ENST00000305866 C11orf70Q9BRQ4 267 aa5.64□□□□□ -1.51
VPS50-202ENST00000305866 SIKE1Q9BRV8 207 aa5.64□□□□□ -1.51
VPS50-202ENST00000305866 ZNF302Q9NR11 478 aa5.64□□□□□ -1.51
VPS50-202ENST00000305866 IL1RAPL1Q9NZN1 696 aa5.64□□□□□ -1.51
VPS50-202ENST00000305866 CDH22Q9UJ99 828 aa5.64□□□□□ -1.51
VPS50-202ENST00000305866 DCTN4Q9UJW0 460 aa5.64□□□□□ -1.51
VPS50-202ENST00000305866 TMCO1Q9UM00 188 aa5.64□□□□□ -1.51
VPS50-202ENST00000305866 POMPQ9Y244 141 aa5.64□□□□□ -1.51
VPS50-202ENST00000305866 LRRD1A4D1F6 860 aa5.63□□□□□ -1.51
VPS50-202ENST00000305866 SOWAHBA6NEL2 793 aa5.63□□□□□ -1.51
VPS50-202ENST00000305866 ACKR2O00590 384 aa5.63□□□□□ -1.51
VPS50-202ENST00000305866 TRDMT1O14717 391 aaKnown RBP5.63□□□□□ -1.51
VPS50-202ENST00000305866 SIN3BO75182 1162 aa5.63□□□□□ -1.51
VPS50-202ENST00000305866 CILPO75339 1184 aa5.63□□□□□ -1.51
VPS50-202ENST00000305866 DGKIO75912 1065 aa5.63□□□□□ -1.51
VPS50-202ENST00000305866 ITGA2BP08514 1039 aa5.63□□□□□ -1.51
VPS50-202ENST00000305866 IQCF3P0C7M6 154 aa5.63□□□□□ -1.51
VPS50-202ENST00000305866 GNA15P30679 374 aa5.63□□□□□ -1.51
VPS50-202ENST00000305866 TNFSF9P41273 254 aa5.63□□□□□ -1.51
VPS50-202ENST00000305866 VPS41P49754 854 aa5.63□□□□□ -1.51
VPS50-202ENST00000305866 HIRAP54198 1017 aaPredicted RBP5.63□□□□□ -1.51
VPS50-202ENST00000305866 YWHAEP62258 255 aaKnown RBP5.63□□□□□ -1.51
VPS50-202ENST00000305866 YBX1P67809 324 aaKnown RBP5.63□□□□□ -1.51
VPS50-202ENST00000305866 MS4A2Q01362 244 aa5.63□□□□□ -1.51
VPS50-202ENST00000305866 MBTD1Q05BQ5 628 aa5.63□□□□□ -1.51
VPS50-202ENST00000305866 TMEM62Q0P6H9 643 aa5.63□□□□□ -1.51
VPS50-202ENST00000305866 WDR44Q5JSH3 913 aa5.63□□□□□ -1.51
VPS50-202ENST00000305866 C1QTNF12Q5T7M4 302 aa5.63□□□□□ -1.51
VPS50-202ENST00000305866 KLHDC10Q6PID8 442 aa5.63□□□□□ -1.51
VPS50-202ENST00000305866 ZNF410Q86VK4 478 aa5.63□□□□□ -1.51
VPS50-202ENST00000305866 PSTKQ8IV42 348 aaKnown RBP5.63□□□□□ -1.51
VPS50-202ENST00000305866 PELI3Q8N2H9 469 aa5.63□□□□□ -1.51
VPS50-202ENST00000305866 B4GALNT2Q8NHY0 566 aa5.63□□□□□ -1.51
VPS50-202ENST00000305866 GRIN3AQ8TCU5 1115 aa5.63□□□□□ -1.51
VPS50-202ENST00000305866 HSPH1Q92598 858 aa5.63□□□□□ -1.51
VPS50-202ENST00000305866 MAELQ96JY0 434 aaKnown RBP5.63□□□□□ -1.51
VPS50-202ENST00000305866 FAM210AQ96ND0 272 aa5.63□□□□□ -1.51
VPS50-202ENST00000305866 GPR20Q99678 358 aa5.63□□□□□ -1.51
VPS50-202ENST00000305866 MAGEB5Q9BZ81 275 aa5.63□□□□□ -1.51
VPS50-202ENST00000305866 KATNBL1Q9H079 304 aa5.63□□□□□ -1.51
VPS50-202ENST00000305866 NKIRAS1Q9NYS0 192 aa5.63□□□□□ -1.51
VPS50-202ENST00000305866 CNOT11Q9UKZ1 510 aaKnown RBP5.63□□□□□ -1.51
VPS50-202ENST00000305866 CDH7Q9ULB5 785 aa5.63□□□□□ -1.51
VPS50-202ENST00000305866 SORCS3Q9UPU3 1222 aa5.63□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 62.2 ms