RNA–Protein interactions for RNA: ENST00000302516.9

SF3B3-201, Transcript of splicing factor 3b subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3B3, Length 9,720 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-201ENST00000302516 ITGALP20701 1170 aa7.84□□□□□ -1.15
SF3B3-201ENST00000302516 WARSP23381 471 aaKnown RBP7.84□□□□□ -1.15
SF3B3-201ENST00000302516 PPP4R4Q6NUP7 873 aa7.84□□□□□ -1.15
SF3B3-201ENST00000302516 ARCQ7LC44 396 aa7.84□□□□□ -1.15
SF3B3-201ENST00000302516 KDELC2Q7Z4H8 507 aa7.84□□□□□ -1.15
SF3B3-201ENST00000302516 ADHFE1Q8IWW8 467 aa7.84□□□□□ -1.15
SF3B3-201ENST00000302516 FNIP1Q8TF40 1166 aa7.84□□□□□ -1.15
SF3B3-201ENST00000302516 KLF6Q99612 283 aaPredicted RBP7.84□□□□□ -1.15
SF3B3-201ENST00000302516 PACSIN1Q9BY11 444 aa7.84□□□□□ -1.15
SF3B3-201ENST00000302516 KCTD10Q9H3F6 313 aa7.84□□□□□ -1.15
SF3B3-201ENST00000302516 CRNNQ9UBG3 495 aaPredicted RBP7.84□□□□□ -1.15
SF3B3-201ENST00000302516 LMO7Q8WWI1 1683 aa7.84□□□□□ -1.16
SF3B3-201ENST00000302516 ERI2A8K979 691 aaKnown RBP7.83□□□□□ -1.16
SF3B3-201ENST00000302516 CHADO15335 359 aa7.83□□□□□ -1.16
SF3B3-201ENST00000302516 TADA2AO75478 443 aa7.83□□□□□ -1.16
SF3B3-201ENST00000302516 SUPT7LO94864 414 aa7.83□□□□□ -1.16
SF3B3-201ENST00000302516 PSMG1O95456 288 aa7.83□□□□□ -1.16
SF3B3-201ENST00000302516 ABCB1P08183 1280 aaPredicted RBP7.83□□□□□ -1.16
SF3B3-201ENST00000302516 SMAD1Q15797 465 aaKnown RBP7.83□□□□□ -1.16
SF3B3-201ENST00000302516 USP39Q53GS9 565 aaKnown RBP7.83□□□□□ -1.16
SF3B3-201ENST00000302516 AP3S1Q92572 193 aa7.83□□□□□ -1.16
SF3B3-201ENST00000302516 NAALADL1Q9UQQ1 740 aa7.83□□□□□ -1.16
SF3B3-201ENST00000302516 DYRK3O43781 588 aa7.83□□□□□ -1.16
SF3B3-201ENST00000302516 SKAP2O75563 359 aaPredicted RBP7.83□□□□□ -1.16
SF3B3-201ENST00000302516 PABPC1P11940 636 aaKnown RBP7.83□□□□□ -1.16
SF3B3-201ENST00000302516 CACNB3P54284 484 aa7.83□□□□□ -1.16
SF3B3-201ENST00000302516 BNC1Q01954 994 aa7.83□□□□□ -1.16
SF3B3-201ENST00000302516 VAC14Q08AM6 782 aa7.83□□□□□ -1.16
SF3B3-201ENST00000302516 CDH18Q13634 790 aa7.83□□□□□ -1.16
SF3B3-201ENST00000302516 ADCK2Q7Z695 626 aa7.83□□□□□ -1.16
SF3B3-201ENST00000302516 FLCNQ8NFG4 579 aa7.83□□□□□ -1.16
SF3B3-201ENST00000302516 CELF1Q92879 486 aaKnown RBP7.83□□□□□ -1.16
SF3B3-201ENST00000302516 WDR12Q9GZL7 423 aaKnown RBP7.83□□□□□ -1.16
SF3B3-201ENST00000302516 VAV3Q9UKW4 847 aa7.83□□□□□ -1.16
SF3B3-201ENST00000302516 FCHO1O14526 889 aa7.83□□□□□ -1.16
SF3B3-201ENST00000302516 RASA1P20936 1047 aa7.83□□□□□ -1.16
SF3B3-201ENST00000302516 ST3GAL1Q11201 340 aa7.83□□□□□ -1.16
SF3B3-201ENST00000302516 CDH17Q12864 832 aa7.83□□□□□ -1.16
SF3B3-201ENST00000302516 SF3B3Q15393 1217 aaKnown RBP7.83□□□□□ -1.16
SF3B3-201ENST00000302516 SGO1Q5FBB7 561 aa7.83□□□□□ -1.16
SF3B3-201ENST00000302516 CCDC149Q6ZUS6 474 aa7.83□□□□□ -1.16
SF3B3-201ENST00000302516 L3MBTL3Q96JM7 780 aaPredicted RBP7.83□□□□□ -1.16
SF3B3-201ENST00000302516 PARK7Q99497 189 aaKnown RBP7.83□□□□□ -1.16
SF3B3-201ENST00000302516 HDHD2Q9H0R4 259 aa7.83□□□□□ -1.16
SF3B3-201ENST00000302516 TDRD3Q9H7E2 651 aaKnown RBP7.83□□□□□ -1.16
SF3B3-201ENST00000302516 ARHGEF3Q9NR81 526 aa7.83□□□□□ -1.16
SF3B3-201ENST00000302516 FAM49BQ9NUQ9 324 aa7.83□□□□□ -1.16
SF3B3-201ENST00000302516 ADPRHL2Q9NX46 363 aa7.83□□□□□ -1.16
SF3B3-201ENST00000302516 PRR12Q9ULL5 1215 aa7.83□□□□□ -1.16
SF3B3-201ENST00000302516 ALDH1A2O94788 518 aa7.83□□□□□ -1.16
SF3B3-201ENST00000302516 CSF1RP07333 972 aa7.83□□□□□ -1.16
SF3B3-201ENST00000302516 NR1H2P55055 460 aa7.83□□□□□ -1.16
SF3B3-201ENST00000302516 ALDH6A1Q02252 535 aaKnown RBP7.83□□□□□ -1.16
SF3B3-201ENST00000302516 FASTKQ14296 549 aaKnown RBP7.83□□□□□ -1.16
SF3B3-201ENST00000302516 ZNF484Q5JVG2 852 aa7.83□□□□□ -1.16
SF3B3-201ENST00000302516 MZT2AQ6P582 158 aa7.83□□□□□ -1.16
SF3B3-201ENST00000302516 LAYNQ6UX15 382 aa7.83□□□□□ -1.16
SF3B3-201ENST00000302516 TSHZ1Q6ZSZ6 1077 aa7.83□□□□□ -1.16
SF3B3-201ENST00000302516 ATG16L2Q8NAA4 619 aa7.83□□□□□ -1.16
SF3B3-201ENST00000302516 PIGUQ9H490 435 aa7.83□□□□□ -1.16
SF3B3-201ENST00000302516 JMJD4Q9H9V9 463 aa7.83□□□□□ -1.16
SF3B3-201ENST00000302516 SH3BP4Q9P0V3 963 aa7.83□□□□□ -1.16
SF3B3-201ENST00000302516 CROTQ9UKG9 612 aa7.83□□□□□ -1.16
SF3B3-201ENST00000302516 SHPRHQ149N8 1683 aa7.83□□□□□ -1.16
SF3B3-201ENST00000302516 EFCAB10A6NFE3 127 aa7.83□□□□□ -1.16
SF3B3-201ENST00000302516 NBPF26B4DH59 902 aa7.83□□□□□ -1.16
SF3B3-201ENST00000302516 F5H5T6 163 aa7.83□□□□□ -1.16
SF3B3-201ENST00000302516 ZBTB22O15209 634 aa7.83□□□□□ -1.16
SF3B3-201ENST00000302516 OGTO15294 1046 aa7.83□□□□□ -1.16
SF3B3-201ENST00000302516 BIRC5O15392 142 aa7.83□□□□□ -1.16
SF3B3-201ENST00000302516 SERPIND1P05546 499 aa7.83□□□□□ -1.16
SF3B3-201ENST00000302516 HSMCR30P0CW71 290 aa7.83□□□□□ -1.16
SF3B3-201ENST00000302516 AVPR1AP37288 418 aa7.83□□□□□ -1.16
SF3B3-201ENST00000302516 SHROOM1Q2M3G4 852 aaPredicted RBP7.83□□□□□ -1.16
SF3B3-201ENST00000302516 N4BP2L1Q5TBK1 243 aaPredicted RBP7.83□□□□□ -1.16
SF3B3-201ENST00000302516 NT5DC4Q86YG4 428 aa7.83□□□□□ -1.16
SF3B3-201ENST00000302516 KATNAL2Q8IYT4 538 aa7.83□□□□□ -1.16
SF3B3-201ENST00000302516 NBPF15Q8N660 670 aa7.83□□□□□ -1.16
SF3B3-201ENST00000302516 FAM120BQ96EK7 910 aaKnown RBP7.83□□□□□ -1.16
SF3B3-201ENST00000302516 EPB41L4AQ9HCS5 686 aaPredicted RBP7.83□□□□□ -1.16
SF3B3-201ENST00000302516 DYRK1BQ9Y463 629 aa7.83□□□□□ -1.16
SF3B3-201ENST00000302516 POLRMTO00411 1230 aaKnown RBP7.83□□□□□ -1.16
SF3B3-201ENST00000302516 DDHD2O94830 711 aa7.83□□□□□ -1.16
SF3B3-201ENST00000302516 SLC26A2P50443 739 aa7.83□□□□□ -1.16
SF3B3-201ENST00000302516 ERFP50548 548 aa7.83□□□□□ -1.16
SF3B3-201ENST00000302516 GRB10Q13322 594 aa7.83□□□□□ -1.16
SF3B3-201ENST00000302516 CAMK2GQ13555 558 aaPredicted RBP7.83□□□□□ -1.16
SF3B3-201ENST00000302516 CHSY1Q86X52 802 aa7.83□□□□□ -1.16
SF3B3-201ENST00000302516 LRRC49Q8IUZ0 686 aa7.83□□□□□ -1.16
SF3B3-201ENST00000302516 KBTBD8Q8NFY9 601 aa7.83□□□□□ -1.16
SF3B3-201ENST00000302516 MYDGFQ969H8 173 aa7.83□□□□□ -1.16
SF3B3-201ENST00000302516 PNPLA3Q9NST1 481 aa7.83□□□□□ -1.16
SF3B3-201ENST00000302516 AP4E1Q9UPM8 1137 aa7.83□□□□□ -1.16
SF3B3-201ENST00000302516 PCDHA3Q9Y5H8 950 aa7.83□□□□□ -1.16
SF3B3-201ENST00000302516 NCANO14594 1321 aa7.83□□□□□ -1.16
SF3B3-201ENST00000302516 FOXN3O00409 490 aaPredicted RBP7.83□□□□□ -1.16
SF3B3-201ENST00000302516 MYL12BO14950 172 aa7.83□□□□□ -1.16
SF3B3-201ENST00000302516 ELF3P78545 371 aaPredicted RBP7.83□□□□□ -1.16
SF3B3-201ENST00000302516 AGKQ53H12 422 aa7.83□□□□□ -1.16
SF3B3-201ENST00000302516 ARHGAP15Q53QZ3 475 aa7.83□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms