RNA–Protein interactions for RNA: ENST00000301475.1

ZNF558-201, Transcript of zinc finger protein 558, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ZNF558, Length 3,014 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF558-201ENST00000301475 CALN1Q9BXU9 219 aa11.23□□□□□ -0.61
ZNF558-201ENST00000301475 TBC1D22BQ9NU19 505 aa11.23□□□□□ -0.61
ZNF558-201ENST00000301475 NFIBO00712 420 aa11.22□□□□□ -0.61
ZNF558-201ENST00000301475 FAM189A1O60320 539 aa11.22□□□□□ -0.61
ZNF558-201ENST00000301475 STAM2O75886 525 aa11.22□□□□□ -0.61
ZNF558-201ENST00000301475 STT3AP46977 705 aa11.22□□□□□ -0.61
ZNF558-201ENST00000301475 THOP1P52888 689 aa11.22□□□□□ -0.61
ZNF558-201ENST00000301475 MTMR1Q13613 665 aa11.22□□□□□ -0.61
ZNF558-201ENST00000301475 NOMO1Q15155 1222 aa11.22□□□□□ -0.61
ZNF558-201ENST00000301475 PPP6R3Q5H9R7 873 aaPredicted RBP11.22□□□□□ -0.61
ZNF558-201ENST00000301475 N4BP2L1Q5TBK1 243 aaPredicted RBP11.22□□□□□ -0.61
ZNF558-201ENST00000301475 MPP5Q8N3R9 675 aa11.22□□□□□ -0.61
ZNF558-201ENST00000301475 GALNT4Q8N4A0 578 aa11.22□□□□□ -0.61
ZNF558-201ENST00000301475 TMEM35BQ8NCS4 154 aa11.22□□□□□ -0.61
ZNF558-201ENST00000301475 LRRN4Q8WUT4 740 aa11.22□□□□□ -0.61
ZNF558-201ENST00000301475 ZBTB45Q96K62 511 aaPredicted RBP11.22□□□□□ -0.61
ZNF558-201ENST00000301475 ZNF512Q96ME7 567 aaPredicted RBP11.22□□□□□ -0.61
ZNF558-201ENST00000301475 KCNK16Q96T55 309 aa11.22□□□□□ -0.61
ZNF558-201ENST00000301475 IDI2Q9BXS1 227 aa11.22□□□□□ -0.61
ZNF558-201ENST00000301475 SLC2A11Q9BYW1 496 aa11.22□□□□□ -0.61
ZNF558-201ENST00000301475 COPS7BQ9H9Q2 264 aaPredicted RBP11.22□□□□□ -0.61
ZNF558-201ENST00000301475 MAN1C1Q9NR34 630 aa11.22□□□□□ -0.61
ZNF558-201ENST00000301475 DNAJC28Q9NX36 388 aa11.22□□□□□ -0.61
ZNF558-201ENST00000301475 ARHGAP26Q9UNA1 814 aa11.22□□□□□ -0.61
ZNF558-201ENST00000301475 CNTNAP2Q9UHC6 1331 aa11.22□□□□□ -0.61
ZNF558-201ENST00000301475 ADCY6O43306 1168 aa11.22□□□□□ -0.61
ZNF558-201ENST00000301475 LSM8O95777 96 aaKnown RBP11.22□□□□□ -0.61
ZNF558-201ENST00000301475 OSBPP22059 807 aa11.22□□□□□ -0.61
ZNF558-201ENST00000301475 TBXAS1P24557 533 aaPredicted RBP11.22□□□□□ -0.61
ZNF558-201ENST00000301475 ADORA2AP29274 412 aa11.22□□□□□ -0.61
ZNF558-201ENST00000301475 GMPRP36959 345 aa11.22□□□□□ -0.61
ZNF558-201ENST00000301475 GABRB2P47870 512 aa11.22□□□□□ -0.61
ZNF558-201ENST00000301475 CD97P48960 835 aa11.22□□□□□ -0.61
ZNF558-201ENST00000301475 HSD17B4P51659 736 aa11.22□□□□□ -0.61
ZNF558-201ENST00000301475 UNC5BQ8IZJ1 945 aa11.22□□□□□ -0.61
ZNF558-201ENST00000301475 SMYD1Q8NB12 490 aa11.22□□□□□ -0.61
ZNF558-201ENST00000301475 KCTD6Q8NC69 237 aa11.22□□□□□ -0.61
ZNF558-201ENST00000301475 OXCT2Q9BYC2 517 aaPredicted RBP11.22□□□□□ -0.61
ZNF558-201ENST00000301475 DHX33Q9H6R0 707 aaKnown RBP11.22□□□□□ -0.61
ZNF558-201ENST00000301475 SUDS3Q9H7L9 328 aaPredicted RBP11.22□□□□□ -0.61
ZNF558-201ENST00000301475 INIPQ9NRY2 104 aa11.22□□□□□ -0.61
ZNF558-201ENST00000301475 FAIMQ9NVQ4 179 aa11.22□□□□□ -0.61
ZNF558-201ENST00000301475 STK39Q9UEW8 545 aa11.22□□□□□ -0.61
ZNF558-201ENST00000301475 UBIAD1Q9Y5Z9 338 aa11.22□□□□□ -0.61
ZNF558-201ENST00000301475 FAM159BA6NKW6 160 aa11.22□□□□□ -0.61
ZNF558-201ENST00000301475 E9PBE3 544 aa11.22□□□□□ -0.61
ZNF558-201ENST00000301475 KLHL41O60662 606 aa11.22□□□□□ -0.61
ZNF558-201ENST00000301475 MAP3K6O95382 1288 aa11.22□□□□□ -0.61
ZNF558-201ENST00000301475 ALDOAP04075 364 aaKnown RBP11.22□□□□□ -0.61
ZNF558-201ENST00000301475 PRKCGP05129 697 aa11.22□□□□□ -0.61
ZNF558-201ENST00000301475 APRTP07741 180 aa11.22□□□□□ -0.61
ZNF558-201ENST00000301475 ALOX15P16050 662 aaPredicted RBP11.22□□□□□ -0.61
ZNF558-201ENST00000301475 XRCC1P18887 633 aaPredicted RBP11.22□□□□□ -0.61
ZNF558-201ENST00000301475 HOXA10P31260 410 aaPredicted RBP11.22□□□□□ -0.61
ZNF558-201ENST00000301475 LIG4P49917 911 aa11.22□□□□□ -0.61
ZNF558-201ENST00000301475 TAP1Q03518 808 aa11.22□□□□□ -0.61
ZNF558-201ENST00000301475 BBS5Q8N3I7 341 aa11.22□□□□□ -0.61
ZNF558-201ENST00000301475 TTLL6Q8N841 843 aa11.22□□□□□ -0.61
ZNF558-201ENST00000301475 APBB2Q92870 758 aa11.22□□□□□ -0.61
ZNF558-201ENST00000301475 LRGUKQ96M69 825 aa11.22□□□□□ -0.61
ZNF558-201ENST00000301475 ANKEF1Q9NU02 776 aa11.22□□□□□ -0.61
ZNF558-201ENST00000301475 RBAKQ9NYW8 714 aaPredicted RBP11.22□□□□□ -0.61
ZNF558-201ENST00000301475 CYTH4Q9UIA0 394 aa11.22□□□□□ -0.61
ZNF558-201ENST00000301475 TRDMT1O14717 391 aaKnown RBP11.21□□□□□ -0.61
ZNF558-201ENST00000301475 PLIN3O60664 434 aa11.21□□□□□ -0.61
ZNF558-201ENST00000301475 DKC1O60832 514 aaKnown RBP eCLIP11.21□□□□□ -0.61
ZNF558-201ENST00000301475 THRAP10827 490 aa11.21□□□□□ -0.61
ZNF558-201ENST00000301475 KRT3P12035 628 aa11.21□□□□□ -0.61
ZNF558-201ENST00000301475 ACAT1P24752 427 aaKnown RBP11.21□□□□□ -0.61
ZNF558-201ENST00000301475 SLC10A2Q12908 348 aaPredicted RBP11.21□□□□□ -0.61
ZNF558-201ENST00000301475 KLF10Q13118 480 aa11.21□□□□□ -0.61
ZNF558-201ENST00000301475 MPP3Q13368 585 aa11.21□□□□□ -0.61
ZNF558-201ENST00000301475 SEZ6Q53EL9 994 aa11.21□□□□□ -0.61
ZNF558-201ENST00000301475 ZNF534Q76KX8 674 aa11.21□□□□□ -0.61
ZNF558-201ENST00000301475 C10orf107Q8IVU9 208 aa11.21□□□□□ -0.61
ZNF558-201ENST00000301475 GRIN3AQ8TCU5 1115 aa11.21□□□□□ -0.61
ZNF558-201ENST00000301475 DDI1Q8WTU0 396 aa11.21□□□□□ -0.61
ZNF558-201ENST00000301475 PEBP4Q96S96 227 aa11.21□□□□□ -0.61
ZNF558-201ENST00000301475 PKP2Q99959 881 aa11.21□□□□□ -0.61
ZNF558-201ENST00000301475 HOMER2Q9NSB8 354 aa11.21□□□□□ -0.61
ZNF558-201ENST00000301475 PPP1R1BQ9UD71 204 aaPredicted RBP11.21□□□□□ -0.61
ZNF558-201ENST00000301475 RSL24D1Q9UHA3 163 aaKnown RBP11.21□□□□□ -0.61
ZNF558-201ENST00000301475 HERC5Q9UII4 1024 aaKnown RBP11.21□□□□□ -0.61
ZNF558-201ENST00000301475 AGO2Q9UKV8 859 aaKnown RBP11.21□□□□□ -0.61
ZNF558-201ENST00000301475 ZNF711Q9Y462 761 aa11.21□□□□□ -0.61
ZNF558-201ENST00000301475 H0YIN7 160 aa11.21□□□□□ -0.62
ZNF558-201ENST00000301475 SERPINE1P05121 402 aa11.21□□□□□ -0.62
ZNF558-201ENST00000301475 MYL4P12829 197 aa11.21□□□□□ -0.62
ZNF558-201ENST00000301475 PTPN1P18031 435 aaKnown RBP11.21□□□□□ -0.62
ZNF558-201ENST00000301475 MIPP30301 263 aa11.21□□□□□ -0.62
ZNF558-201ENST00000301475 ABCD1P33897 745 aa11.21□□□□□ -0.62
ZNF558-201ENST00000301475 ATXN3P54252 364 aaPredicted RBP11.21□□□□□ -0.62
ZNF558-201ENST00000301475 HADHQ16836 314 aaKnown RBP11.21□□□□□ -0.62
ZNF558-201ENST00000301475 RAB6CQ53S08 254 aa11.21□□□□□ -0.62
ZNF558-201ENST00000301475 RNF168Q8IYW5 571 aaPredicted RBP11.21□□□□□ -0.62
ZNF558-201ENST00000301475 CMASQ8NFW8 434 aaPredicted RBP11.21□□□□□ -0.62
ZNF558-201ENST00000301475 KBTBD7Q8WVZ9 684 aa11.21□□□□□ -0.62
ZNF558-201ENST00000301475 CEP170P1Q96L14 293 aa11.21□□□□□ -0.62
ZNF558-201ENST00000301475 RAB6CQ9H0N0 254 aa11.21□□□□□ -0.62
ZNF558-201ENST00000301475 TUBGCP4Q9UGJ1 667 aa11.21□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms