RNA–Protein interactions for RNA: ENST00000300933.8

TPM4-201, Transcript of tropomyosin 4, humanhuman

TSL 1 (best) BASIC

Gene TPM4, Length 2,666 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-201ENST00000300933 PIH1D1Q9NWS0 290 aaKnown RBP22.71■■□□□ 1.23
TPM4-201ENST00000300933 NKIRAS1Q9NYS0 192 aa22.71■■□□□ 1.23
TPM4-201ENST00000300933 ZFATQ9P243 1243 aa22.71■■□□□ 1.23
TPM4-201ENST00000300933 GTF2IRD1Q9UHL9 959 aa22.71■■□□□ 1.23
TPM4-201ENST00000300933 H0Y3Z8 333 aa22.7■■□□□ 1.22
TPM4-201ENST00000300933 DUSP11O75319 330 aaKnown RBP22.7■■□□□ 1.22
TPM4-201ENST00000300933 POMCP01189 267 aa22.7■■□□□ 1.22
TPM4-201ENST00000300933 FOXN2P32314 431 aa22.7■■□□□ 1.22
TPM4-201ENST00000300933 RPA3P35244 121 aaPredicted RBP22.7■■□□□ 1.22
TPM4-201ENST00000300933 SULT1E1P49888 294 aa22.7■■□□□ 1.22
TPM4-201ENST00000300933 VSIG1Q86XK7 387 aa22.7■■□□□ 1.22
TPM4-201ENST00000300933 TNIP3Q96KP6 325 aa22.7■■□□□ 1.22
TPM4-201ENST00000300933 CRTAC1Q9NQ79 661 aa22.7■■□□□ 1.22
TPM4-201ENST00000300933 NRP1O14786 923 aa22.7■■□□□ 1.22
TPM4-201ENST00000300933 YWHAGP61981 247 aaKnown RBP eCLIP22.7■■□□□ 1.22
TPM4-201ENST00000300933 SLC9A4Q6AI14 798 aa22.7■■□□□ 1.22
TPM4-201ENST00000300933 TP53INP2Q8IXH6 220 aa22.7■■□□□ 1.22
TPM4-201ENST00000300933 NME8Q8N427 588 aa22.7■■□□□ 1.22
TPM4-201ENST00000300933 CFAP36Q96G28 342 aa22.7■■□□□ 1.22
TPM4-201ENST00000300933 C11orf84Q9BUA3 381 aaPredicted RBP22.7■■□□□ 1.22
TPM4-201ENST00000300933 FRMD8P1Q9BZ68 369 aaPredicted RBP22.7■■□□□ 1.22
TPM4-201ENST00000300933 PITPNM3Q9BZ71 974 aa22.7■■□□□ 1.22
TPM4-201ENST00000300933 MYLK2Q9H1R3 596 aa22.7■■□□□ 1.22
TPM4-201ENST00000300933 HAO1Q9UJM8 370 aa22.7■■□□□ 1.22
TPM4-201ENST00000300933 KBTBD13C9JR72 458 aa22.69■■□□□ 1.22
TPM4-201ENST00000300933 LUC7L3O95232 432 aaKnown RBP22.69■■□□□ 1.22
TPM4-201ENST00000300933 CCNB1P14635 433 aa22.69■■□□□ 1.22
TPM4-201ENST00000300933 THPOP40225 353 aa22.69■■□□□ 1.22
TPM4-201ENST00000300933 SMAD1Q15797 465 aaKnown RBP22.69■■□□□ 1.22
TPM4-201ENST00000300933 CLEC20AQ6ZU45 233 aa22.69■■□□□ 1.22
TPM4-201ENST00000300933 GPRIN1Q7Z2K8 1008 aa22.69■■□□□ 1.22
TPM4-201ENST00000300933 ERP27Q96DN0 273 aa22.69■■□□□ 1.22
TPM4-201ENST00000300933 CSPG4P5Q96PW8 444 aa22.69■■□□□ 1.22
TPM4-201ENST00000300933 PAFAH2Q99487 392 aa22.69■■□□□ 1.22
TPM4-201ENST00000300933 DUSP16Q9BY84 665 aa22.69■■□□□ 1.22
TPM4-201ENST00000300933 FAM124BQ9H5Z6 455 aaPredicted RBP22.69■■□□□ 1.22
TPM4-201ENST00000300933 KRT82Q9NSB4 513 aa22.69■■□□□ 1.22
TPM4-201ENST00000300933 GRID1Q9ULK0 1009 aa22.69■■□□□ 1.22
TPM4-201ENST00000300933 DPPA5A6NC42 116 aa22.69■■□□□ 1.22
TPM4-201ENST00000300933 ARL5CA6NH57 179 aa22.69■■□□□ 1.22
TPM4-201ENST00000300933 CREB3O43889 395 aa22.69■■□□□ 1.22
TPM4-201ENST00000300933 METTL18O95568 372 aa22.69■■□□□ 1.22
TPM4-201ENST00000300933 KRT4P19013 534 aa22.69■■□□□ 1.22
TPM4-201ENST00000300933 HOXC8P31273 242 aa22.69■■□□□ 1.22
TPM4-201ENST00000300933 CD52P31358 61 aa22.69■■□□□ 1.22
TPM4-201ENST00000300933 GRIA1P42261 906 aa22.69■■□□□ 1.22
TPM4-201ENST00000300933 KCNT2Q6UVM3 1135 aa22.69■■□□□ 1.22
TPM4-201ENST00000300933 ATP11CQ8NB49 1132 aa22.69■■□□□ 1.22
TPM4-201ENST00000300933 TEKT4Q8WW24 435 aa22.69■■□□□ 1.22
TPM4-201ENST00000300933 SOCS4Q8WXH5 440 aa22.69■■□□□ 1.22
TPM4-201ENST00000300933 LGMNQ99538 433 aa22.69■■□□□ 1.22
TPM4-201ENST00000300933 SH3GL3Q99963 347 aa22.69■■□□□ 1.22
TPM4-201ENST00000300933 MTG1Q9BT17 334 aaPredicted RBP22.69■■□□□ 1.22
TPM4-201ENST00000300933 LRRC4Q9HBW1 653 aa22.69■■□□□ 1.22
TPM4-201ENST00000300933 MDM4O15151 490 aa22.68■■□□□ 1.22
TPM4-201ENST00000300933 FAM155BO75949 473 aa22.68■■□□□ 1.22
TPM4-201ENST00000300933 AMHP03971 560 aa22.68■■□□□ 1.22
TPM4-201ENST00000300933 KCNJ11Q14654 390 aa22.68■■□□□ 1.22
TPM4-201ENST00000300933 TAF2Q6P1X5 1199 aa22.68■■□□□ 1.22
TPM4-201ENST00000300933 CEP128Q6ZU80 1094 aa22.68■■□□□ 1.22
TPM4-201ENST00000300933 PRPF39Q86UA1 669 aaKnown RBP22.68■■□□□ 1.22
TPM4-201ENST00000300933 RAB3IPQ96QF0 476 aaPredicted RBP22.68■■□□□ 1.22
TPM4-201ENST00000300933 PLCD4Q9BRC7 762 aa22.68■■□□□ 1.22
TPM4-201ENST00000300933 ZNF638Q14966 1978 aaKnown RBP22.68■■□□□ 1.22
TPM4-201ENST00000300933 A6NHS1 94 aa22.68■■□□□ 1.22
TPM4-201ENST00000300933 F8W810 466 aa22.68■■□□□ 1.22
TPM4-201ENST00000300933 MGEA5O60502 916 aa22.68■■□□□ 1.22
TPM4-201ENST00000300933 ELNP15502 786 aa22.68■■□□□ 1.22
TPM4-201ENST00000300933 NPR3P17342 541 aa22.68■■□□□ 1.22
TPM4-201ENST00000300933 PTPN9P43378 593 aa22.68■■□□□ 1.22
TPM4-201ENST00000300933 TKTL1P51854 596 aa22.68■■□□□ 1.22
TPM4-201ENST00000300933 GEMIN4P57678 1058 aaKnown RBP22.68■■□□□ 1.22
TPM4-201ENST00000300933 AGMOQ6ZNB7 445 aa22.68■■□□□ 1.22
TPM4-201ENST00000300933 ZDHHC17Q8IUH5 632 aa22.68■■□□□ 1.22
TPM4-201ENST00000300933 CENPIQ92674 756 aaPredicted RBP22.68■■□□□ 1.22
TPM4-201ENST00000300933 ABT1Q9ULW3 272 aaKnown RBP22.68■■□□□ 1.22
TPM4-201ENST00000300933 INPP5FQ9Y2H2 1132 aa22.68■■□□□ 1.22
TPM4-201ENST00000300933 MRPL42Q9Y6G3 142 aaKnown RBP22.68■■□□□ 1.22
TPM4-201ENST00000300933 PDCD11Q14690 1871 aaKnown RBP22.68■■□□□ 1.22
TPM4-201ENST00000300933 FAM47DPA6NHR8 397 aa22.67■■□□□ 1.22
TPM4-201ENST00000300933 M0QYT0 321 aa22.67■■□□□ 1.22
TPM4-201ENST00000300933 THP07101 528 aa22.67■■□□□ 1.22
TPM4-201ENST00000300933 DESP17661 470 aa22.67■■□□□ 1.22
TPM4-201ENST00000300933 CA4P22748 312 aa22.67■■□□□ 1.22
TPM4-201ENST00000300933 MATKP42679 507 aa22.67■■□□□ 1.22
TPM4-201ENST00000300933 SNX16P57768 344 aa22.67■■□□□ 1.22
TPM4-201ENST00000300933 SLC1A5Q15758 541 aa22.67■■□□□ 1.22
TPM4-201ENST00000300933 AP1ARQ63HQ0 302 aa22.67■■□□□ 1.22
TPM4-201ENST00000300933 DSTYKQ6XUX3 929 aa22.67■■□□□ 1.22
TPM4-201ENST00000300933 LIMS2Q7Z4I7 341 aa22.67■■□□□ 1.22
TPM4-201ENST00000300933 HNRNPABQ99729 332 aaKnown RBP22.67■■□□□ 1.22
TPM4-201ENST00000300933 ZNF670Q9BS34 389 aa22.67■■□□□ 1.22
TPM4-201ENST00000300933 Q9Y3F1 56 aa22.67■■□□□ 1.22
TPM4-201ENST00000300933 TRPV2Q9Y5S1 764 aa22.67■■□□□ 1.22
TPM4-201ENST00000300933 WDR91A4D1P6 747 aa22.67■■□□□ 1.22
TPM4-201ENST00000300933 XPO1O14980 1071 aaKnown RBP22.67■■□□□ 1.22
TPM4-201ENST00000300933 AP1G2O75843 785 aa22.67■■□□□ 1.22
TPM4-201ENST00000300933 IGHA2P01877 340 aa22.67■■□□□ 1.22
TPM4-201ENST00000300933 WARSP23381 471 aaKnown RBP22.67■■□□□ 1.22
TPM4-201ENST00000300933 YWHAZP63104 245 aaKnown RBP22.67■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms