RNA–Protein interactions for RNA: ENST00000299267.8

GABRB3-201, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 1 (best) BASIC

Gene GABRB3, Length 4,494 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-201ENST00000299267 CFAP52Q8N1V2 620 aa10.5□□□□□ -0.73
GABRB3-201ENST00000299267 ST13P5Q8NFI4 369 aaPredicted RBP10.5□□□□□ -0.73
GABRB3-201ENST00000299267 TMA16Q96EY4 203 aaKnown RBP10.5□□□□□ -0.73
GABRB3-201ENST00000299267 FICDQ9BVA6 458 aa10.5□□□□□ -0.73
GABRB3-201ENST00000299267 PABPC3Q9H361 631 aaKnown RBP10.5□□□□□ -0.73
GABRB3-201ENST00000299267 ATP13A1Q9HD20 1204 aa10.5□□□□□ -0.73
GABRB3-201ENST00000299267 NR2E3Q9Y5X4 410 aa10.5□□□□□ -0.73
GABRB3-201ENST00000299267 KAT6AQ92794 2004 aa10.5□□□□□ -0.73
GABRB3-201ENST00000299267 UNCXA6NJT0 531 aa10.5□□□□□ -0.73
GABRB3-201ENST00000299267 TCP11X1B4DZS4 312 aa10.5□□□□□ -0.73
GABRB3-201ENST00000299267 ARVCFO00192 962 aa10.5□□□□□ -0.73
GABRB3-201ENST00000299267 RNF103O00237 685 aa10.5□□□□□ -0.73
GABRB3-201ENST00000299267 DIAPH2O60879 1101 aa10.5□□□□□ -0.73
GABRB3-201ENST00000299267 CHN1P15882 459 aa10.5□□□□□ -0.73
GABRB3-201ENST00000299267 PPARGP37231 505 aaPredicted RBP10.5□□□□□ -0.73
GABRB3-201ENST00000299267 GATMP50440 423 aa10.5□□□□□ -0.73
GABRB3-201ENST00000299267 BMPR2Q13873 1038 aa10.5□□□□□ -0.73
GABRB3-201ENST00000299267 TERF2Q15554 542 aa10.5□□□□□ -0.73
GABRB3-201ENST00000299267 SOWAHAQ2M3V2 549 aa10.5□□□□□ -0.73
GABRB3-201ENST00000299267 MARC1Q5VT66 337 aa10.5□□□□□ -0.73
GABRB3-201ENST00000299267 NAPEPLDQ6IQ20 393 aa10.5□□□□□ -0.73
GABRB3-201ENST00000299267 SCAMP5Q8TAC9 235 aa10.5□□□□□ -0.73
GABRB3-201ENST00000299267 SCG3Q8WXD2 468 aaKnown RBP10.5□□□□□ -0.73
GABRB3-201ENST00000299267 USP6NLQ92738 828 aa10.5□□□□□ -0.73
GABRB3-201ENST00000299267 ELMO2Q96JJ3 720 aa10.5□□□□□ -0.73
GABRB3-201ENST00000299267 SERPINB11Q96P15 392 aa10.5□□□□□ -0.73
GABRB3-201ENST00000299267 SHCBP1LQ9BZQ2 653 aa10.5□□□□□ -0.73
GABRB3-201ENST00000299267 STXBP5LQ9Y2K9 1186 aa10.5□□□□□ -0.73
GABRB3-201ENST00000299267 TMEM120BA0PK00 339 aa10.5□□□□□ -0.73
GABRB3-201ENST00000299267 TMEM191CA6NGB0 347 aa10.5□□□□□ -0.73
GABRB3-201ENST00000299267 RASSF10A6NK89 507 aa10.5□□□□□ -0.73
GABRB3-201ENST00000299267 MRPS5P82675 430 aaKnown RBP10.5□□□□□ -0.73
GABRB3-201ENST00000299267 OCRLQ01968 901 aa10.5□□□□□ -0.73
GABRB3-201ENST00000299267 RABGAP1LQ5R372 815 aa10.5□□□□□ -0.73
GABRB3-201ENST00000299267 ANKS3Q6ZW76 656 aa10.5□□□□□ -0.73
GABRB3-201ENST00000299267 CRLF3Q8IUI8 442 aa10.5□□□□□ -0.73
GABRB3-201ENST00000299267 NUP93Q8N1F7 819 aa10.5□□□□□ -0.73
GABRB3-201ENST00000299267 PRDM12Q9H4Q4 367 aa10.5□□□□□ -0.73
GABRB3-201ENST00000299267 ARHGEF38Q9NXL2 777 aa10.5□□□□□ -0.73
GABRB3-201ENST00000299267 ADAM28Q9UKQ2 775 aa10.5□□□□□ -0.73
GABRB3-201ENST00000299267 CACNA1SQ13698 1873 aa10.5□□□□□ -0.73
GABRB3-201ENST00000299267 STX7O15400 261 aaKnown RBP10.49□□□□□ -0.73
GABRB3-201ENST00000299267 ADCY6O43306 1168 aa10.49□□□□□ -0.73
GABRB3-201ENST00000299267 SNX2O60749 519 aa10.49□□□□□ -0.73
GABRB3-201ENST00000299267 CAND2O75155 1236 aa10.49□□□□□ -0.73
GABRB3-201ENST00000299267 BANF1O75531 89 aa10.49□□□□□ -0.73
GABRB3-201ENST00000299267 MYBL2P10244 700 aa10.49□□□□□ -0.73
GABRB3-201ENST00000299267 TKTP29401 623 aaKnown RBP10.49□□□□□ -0.73
GABRB3-201ENST00000299267 JAM2P57087 298 aa10.49□□□□□ -0.73
GABRB3-201ENST00000299267 POM121L1PQ3SYA9 428 aa10.49□□□□□ -0.73
GABRB3-201ENST00000299267 LCLAT1Q6UWP7 414 aa10.49□□□□□ -0.73
GABRB3-201ENST00000299267 LRRC6Q86X45 466 aa10.49□□□□□ -0.73
GABRB3-201ENST00000299267 ZDHHC17Q8IUH5 632 aa10.49□□□□□ -0.73
GABRB3-201ENST00000299267 REM2Q8IYK8 340 aaPredicted RBP10.49□□□□□ -0.73
GABRB3-201ENST00000299267 HTR3CQ8WXA8 447 aa10.49□□□□□ -0.73
GABRB3-201ENST00000299267 ABCC13Q9NSE7 274 aa10.49□□□□□ -0.73
GABRB3-201ENST00000299267 MYH11P35749 1972 aa10.49□□□□□ -0.73
GABRB3-201ENST00000299267 BAG2O95816 211 aa10.49□□□□□ -0.73
GABRB3-201ENST00000299267 ZNF865P0CJ78 1059 aaPredicted RBP10.49□□□□□ -0.73
GABRB3-201ENST00000299267 ELK3P41970 407 aa10.49□□□□□ -0.73
GABRB3-201ENST00000299267 RHOAP61586 193 aa10.49□□□□□ -0.73
GABRB3-201ENST00000299267 CRELD2Q6UXH1 353 aaPredicted RBP10.49□□□□□ -0.73
GABRB3-201ENST00000299267 HS6ST3Q8IZP7 471 aa10.49□□□□□ -0.73
GABRB3-201ENST00000299267 TMEM40Q8WWA1 233 aa10.49□□□□□ -0.73
GABRB3-201ENST00000299267 CPSF2Q9P2I0 782 aaKnown RBP10.49□□□□□ -0.73
GABRB3-201ENST00000299267 R3HDM2Q9Y2K5 976 aaKnown RBP10.49□□□□□ -0.73
GABRB3-201ENST00000299267 SNX10Q9Y5X0 201 aa10.49□□□□□ -0.73
GABRB3-201ENST00000299267 A0A1W2PQ45 241 aaPredicted RBP10.49□□□□□ -0.73
GABRB3-201ENST00000299267 A0A1W2PQY0 241 aa10.49□□□□□ -0.73
GABRB3-201ENST00000299267 CD48P09326 243 aa10.49□□□□□ -0.73
GABRB3-201ENST00000299267 GFAPP14136 432 aa10.49□□□□□ -0.73
GABRB3-201ENST00000299267 ERCC2P18074 760 aa10.49□□□□□ -0.73
GABRB3-201ENST00000299267 CHRM3P20309 590 aa10.49□□□□□ -0.73
GABRB3-201ENST00000299267 NFKBIAP25963 317 aa10.49□□□□□ -0.73
GABRB3-201ENST00000299267 MAXP61244 160 aa10.49□□□□□ -0.73
GABRB3-201ENST00000299267 ARHGEF7Q14155 803 aa10.49□□□□□ -0.73
GABRB3-201ENST00000299267 POLD3Q15054 466 aaPredicted RBP10.49□□□□□ -0.73
GABRB3-201ENST00000299267 TOP6BLQ8N6T0 577 aa10.49□□□□□ -0.73
GABRB3-201ENST00000299267 HIPK4Q8NE63 616 aa10.49□□□□□ -0.73
GABRB3-201ENST00000299267 CHMP6Q96FZ7 201 aa10.49□□□□□ -0.73
GABRB3-201ENST00000299267 ZMAT2Q96NC0 199 aaKnown RBP10.49□□□□□ -0.73
GABRB3-201ENST00000299267 TM6SF2Q9BZW4 377 aa10.49□□□□□ -0.73
GABRB3-201ENST00000299267 NOCTQ9UK39 431 aaKnown RBP10.49□□□□□ -0.73
GABRB3-201ENST00000299267 NR2E1Q9Y466 385 aa10.49□□□□□ -0.73
GABRB3-201ENST00000299267 GMNCA6NCL1 334 aa10.48□□□□□ -0.73
GABRB3-201ENST00000299267 SYF2O95926 243 aaKnown RBP10.48□□□□□ -0.73
GABRB3-201ENST00000299267 PIRTP0C851 137 aa10.48□□□□□ -0.73
GABRB3-201ENST00000299267 CKBP12277 381 aa10.48□□□□□ -0.73
GABRB3-201ENST00000299267 KRT4P19013 534 aa10.48□□□□□ -0.73
GABRB3-201ENST00000299267 GLRBP48167 497 aa10.48□□□□□ -0.73
GABRB3-201ENST00000299267 KPNA2P52292 529 aaKnown RBP10.48□□□□□ -0.73
GABRB3-201ENST00000299267 SMAD3P84022 425 aaKnown RBP10.48□□□□□ -0.73
GABRB3-201ENST00000299267 TRIM60Q495X7 471 aa10.48□□□□□ -0.73
GABRB3-201ENST00000299267 FUT10Q6P4F1 479 aa10.48□□□□□ -0.73
GABRB3-201ENST00000299267 ECHDC2Q86YB7 292 aa10.48□□□□□ -0.73
GABRB3-201ENST00000299267 MAB21L3Q8N8X9 362 aa10.48□□□□□ -0.73
GABRB3-201ENST00000299267 KLHL29Q96CT2 875 aa10.48□□□□□ -0.73
GABRB3-201ENST00000299267 ERVK-5Q9HDB9 667 aa10.48□□□□□ -0.73
GABRB3-201ENST00000299267 SHOC2Q9UQ13 582 aa10.48□□□□□ -0.73
GABRB3-201ENST00000299267 DNAJC25-GNG10A0A024R161 153 aa10.48□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms