RNA–Protein interactions for RNA: ENST00000298746.4

TRUB1-201, Transcript of TruB pseudouridine synthase family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRUB1, Length 3,408 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRUB1-201ENST00000298746 CRY2Q49AN0 593 aa11.76□□□□□ -0.53
TRUB1-201ENST00000298746 PABPC1LQ4VXU2 614 aaKnown RBP11.76□□□□□ -0.53
TRUB1-201ENST00000298746 PPM1JQ5JR12 505 aa11.76□□□□□ -0.53
TRUB1-201ENST00000298746 SCARA3Q6AZY7 606 aa11.76□□□□□ -0.53
TRUB1-201ENST00000298746 BHLHE22Q8NFJ8 381 aaPredicted RBP11.76□□□□□ -0.53
TRUB1-201ENST00000298746 ADAM32Q8TC27 787 aa11.76□□□□□ -0.53
TRUB1-201ENST00000298746 CGRRF1Q99675 332 aa11.76□□□□□ -0.53
TRUB1-201ENST00000298746 IDI2Q9BXS1 227 aa11.76□□□□□ -0.53
TRUB1-201ENST00000298746 C1orf21Q9H246 121 aa11.76□□□□□ -0.53
TRUB1-201ENST00000298746 C20orf96Q9NUD7 363 aaPredicted RBP11.76□□□□□ -0.53
TRUB1-201ENST00000298746 EPS15L1Q9UBC2 864 aa11.76□□□□□ -0.53
TRUB1-201ENST00000298746 PSMD13Q9UNM6 376 aa11.76□□□□□ -0.53
TRUB1-201ENST00000298746 TTLL3Q9Y4R7 772 aa11.76□□□□□ -0.53
TRUB1-201ENST00000298746 A0A0J9YVX5 310 aa11.76□□□□□ -0.53
TRUB1-201ENST00000298746 GLRA3O75311 464 aa11.76□□□□□ -0.53
TRUB1-201ENST00000298746 CSDE1O75534 798 aaKnown RBP11.76□□□□□ -0.53
TRUB1-201ENST00000298746 ITGAXP20702 1163 aa11.76□□□□□ -0.53
TRUB1-201ENST00000298746 CRHR1P34998 444 aa11.76□□□□□ -0.53
TRUB1-201ENST00000298746 TNFSF9P41273 254 aa11.76□□□□□ -0.53
TRUB1-201ENST00000298746 IDH3AP50213 366 aa11.76□□□□□ -0.53
TRUB1-201ENST00000298746 ESRRGP62508 458 aa11.76□□□□□ -0.53
TRUB1-201ENST00000298746 MYLK3Q32MK0 819 aa11.76□□□□□ -0.53
TRUB1-201ENST00000298746 EML3Q32P44 896 aa11.76□□□□□ -0.53
TRUB1-201ENST00000298746 SH3PXD2AQ5TCZ1 1133 aa11.76□□□□□ -0.53
TRUB1-201ENST00000298746 BNC2Q6ZN30 1099 aaPredicted RBP11.76□□□□□ -0.53
TRUB1-201ENST00000298746 HACE1Q8IYU2 909 aa11.76□□□□□ -0.53
TRUB1-201ENST00000298746 SAMD3Q8N6K7 520 aa11.76□□□□□ -0.53
TRUB1-201ENST00000298746 LENG8Q96PV6 779 aaPredicted RBP11.76□□□□□ -0.53
TRUB1-201ENST00000298746 BTBD9Q96Q07 612 aa11.76□□□□□ -0.53
TRUB1-201ENST00000298746 HAUS8Q9BT25 410 aa11.76□□□□□ -0.53
TRUB1-201ENST00000298746 FRMD8P1Q9BZ68 369 aaPredicted RBP11.76□□□□□ -0.53
TRUB1-201ENST00000298746 FAM96AQ9H5X1 160 aa11.76□□□□□ -0.53
TRUB1-201ENST00000298746 C17orf75Q9HAS0 396 aa11.76□□□□□ -0.53
TRUB1-201ENST00000298746 WDR27A2RRH5 827 aa11.75□□□□□ -0.53
TRUB1-201ENST00000298746 CHADO15335 359 aa11.75□□□□□ -0.53
TRUB1-201ENST00000298746 TFAP2AP05549 437 aa11.75□□□□□ -0.53
TRUB1-201ENST00000298746 CPOXP36551 454 aa11.75□□□□□ -0.53
TRUB1-201ENST00000298746 GRIA1P42261 906 aa11.75□□□□□ -0.53
TRUB1-201ENST00000298746 XIAPP98170 497 aa11.75□□□□□ -0.53
TRUB1-201ENST00000298746 MAP7D1Q3KQU3 841 aa11.75□□□□□ -0.53
TRUB1-201ENST00000298746 RNF111Q6ZNA4 994 aa11.75□□□□□ -0.53
TRUB1-201ENST00000298746 ARCQ7LC44 396 aa11.75□□□□□ -0.53
TRUB1-201ENST00000298746 MPP5Q8N3R9 675 aa11.75□□□□□ -0.53
TRUB1-201ENST00000298746 CCNYQ8ND76 341 aa11.75□□□□□ -0.53
TRUB1-201ENST00000298746 DDI1Q8WTU0 396 aa11.75□□□□□ -0.53
TRUB1-201ENST00000298746 MARK4Q96L34 752 aa11.75□□□□□ -0.53
TRUB1-201ENST00000298746 CEP41Q9BYV8 373 aa11.75□□□□□ -0.53
TRUB1-201ENST00000298746 WDR55Q9H6Y2 383 aaPredicted RBP11.75□□□□□ -0.53
TRUB1-201ENST00000298746 ITGA11Q9UKX5 1188 aa11.75□□□□□ -0.53
TRUB1-201ENST00000298746 DMTF1Q9Y222 760 aa11.75□□□□□ -0.53
TRUB1-201ENST00000298746 CCNT2O60583 730 aaKnown RBP11.75□□□□□ -0.53
TRUB1-201ENST00000298746 ICAM1P05362 532 aa11.75□□□□□ -0.53
TRUB1-201ENST00000298746 CPA3P15088 417 aa11.75□□□□□ -0.53
TRUB1-201ENST00000298746 TSHRP16473 764 aa11.75□□□□□ -0.53
TRUB1-201ENST00000298746 BAATQ14032 418 aaPredicted RBP11.75□□□□□ -0.53
TRUB1-201ENST00000298746 ZNF667Q5HYK9 610 aa11.75□□□□□ -0.53
TRUB1-201ENST00000298746 UGT2A3Q6UWM9 527 aa11.75□□□□□ -0.53
TRUB1-201ENST00000298746 B3GNT9Q6UX72 402 aa11.75□□□□□ -0.53
TRUB1-201ENST00000298746 FAM156AQ8NDB6 213 aa11.75□□□□□ -0.53
TRUB1-201ENST00000298746 CATSPER1Q8NEC5 780 aa11.75□□□□□ -0.53
TRUB1-201ENST00000298746 ACTRT2Q8TDY3 377 aa11.75□□□□□ -0.53
TRUB1-201ENST00000298746 NCSTNQ92542 709 aa11.75□□□□□ -0.53
TRUB1-201ENST00000298746 PLEKHG4BQ96PX9 1271 aa11.75□□□□□ -0.53
TRUB1-201ENST00000298746 CPXM1Q96SM3 734 aa11.75□□□□□ -0.53
TRUB1-201ENST00000298746 MRPS26Q9BYN8 205 aaKnown RBP11.75□□□□□ -0.53
TRUB1-201ENST00000298746 USP29Q9HBJ7 922 aa11.75□□□□□ -0.53
TRUB1-201ENST00000298746 ZNF358Q9NW07 568 aa11.75□□□□□ -0.53
TRUB1-201ENST00000298746 NR2E3Q9Y5X4 410 aa11.75□□□□□ -0.53
TRUB1-201ENST00000298746 SYNJ2BP-COX16A0A087WUM0 186 aa11.74□□□□□ -0.53
TRUB1-201ENST00000298746 ARHGEF37A1IGU5 675 aa11.74□□□□□ -0.53
TRUB1-201ENST00000298746 CCDC78A2IDD5 438 aa11.74□□□□□ -0.53
TRUB1-201ENST00000298746 TRDMT1O14717 391 aaKnown RBP11.74□□□□□ -0.53
TRUB1-201ENST00000298746 BIRC5O15392 142 aa11.74□□□□□ -0.53
TRUB1-201ENST00000298746 ZSCAN9O15535 394 aaPredicted RBP11.74□□□□□ -0.53
TRUB1-201ENST00000298746 F7P08709 466 aaPredicted RBP11.74□□□□□ -0.53
TRUB1-201ENST00000298746 ALDH1B1P30837 517 aa11.74□□□□□ -0.53
TRUB1-201ENST00000298746 GARSP41250 739 aaKnown RBP11.74□□□□□ -0.53
TRUB1-201ENST00000298746 DGKZQ13574 1117 aa11.74□□□□□ -0.53
TRUB1-201ENST00000298746 HNRNPDQ14103 355 aaKnown RBP11.74□□□□□ -0.53
TRUB1-201ENST00000298746 PGM5Q15124 567 aa11.74□□□□□ -0.53
TRUB1-201ENST00000298746 CES4AQ5XG92 561 aa11.74□□□□□ -0.53
TRUB1-201ENST00000298746 KYQ8NBH2 561 aa11.74□□□□□ -0.53
TRUB1-201ENST00000298746 NETO2Q8NC67 525 aa11.74□□□□□ -0.53
TRUB1-201ENST00000298746 PRICKLE1Q96MT3 831 aaPredicted RBP11.74□□□□□ -0.53
TRUB1-201ENST00000298746 TCF7L2Q9NQB0 619 aa11.74□□□□□ -0.53
TRUB1-201ENST00000298746 COX16Q9P0S2 106 aa11.74□□□□□ -0.53
TRUB1-201ENST00000298746 UBIAD1Q9Y5Z9 338 aa11.74□□□□□ -0.53
TRUB1-201ENST00000298746 CDY2AQ9Y6F7 541 aa11.74□□□□□ -0.53
TRUB1-201ENST00000298746 CDY1Q9Y6F8 540 aa11.74□□□□□ -0.53
TRUB1-201ENST00000298746 RGL2O15211 777 aa11.74□□□□□ -0.53
TRUB1-201ENST00000298746 LYPLA2O95372 231 aa11.74□□□□□ -0.53
TRUB1-201ENST00000298746 CCDC166P0CW27 439 aa11.74□□□□□ -0.53
TRUB1-201ENST00000298746 EIF4BP23588 611 aaKnown RBP11.74□□□□□ -0.53
TRUB1-201ENST00000298746 NR1H2P55055 460 aa11.74□□□□□ -0.53
TRUB1-201ENST00000298746 SLC25A11Q02978 314 aaKnown RBP11.74□□□□□ -0.53
TRUB1-201ENST00000298746 KLF10Q13118 480 aa11.74□□□□□ -0.53
TRUB1-201ENST00000298746 FAM47CQ5HY64 1035 aa11.74□□□□□ -0.53
TRUB1-201ENST00000298746 TEDDM1Q5T9Z0 273 aa11.74□□□□□ -0.53
TRUB1-201ENST00000298746 HEATR6Q6AI08 1181 aaKnown RBP11.74□□□□□ -0.53
TRUB1-201ENST00000298746 GRAMD4Q6IC98 578 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms