RNA–Protein interactions for RNA: ENST00000298173.7

GTF2A1-201, Transcript of general transcription factor IIA subunit 1, humanhuman

TSL 2

Gene GTF2A1, Length 1,677 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1-201ENST00000298173 TLR5O60602 858 aa25.57■■□□□ 1.68
GTF2A1-201ENST00000298173 TJP3O95049 919 aa25.57■■□□□ 1.68
GTF2A1-201ENST00000298173 LRG1P02750 347 aa25.57■■□□□ 1.68
GTF2A1-201ENST00000298173 PPP2R5DQ14738 602 aa25.57■■□□□ 1.68
GTF2A1-201ENST00000298173 NAA30Q147X3 362 aaPredicted RBP25.57■■□□□ 1.68
GTF2A1-201ENST00000298173 BRMS1LQ5PSV4 323 aa25.57■■□□□ 1.68
GTF2A1-201ENST00000298173 KLHDC10Q6PID8 442 aa25.57■■□□□ 1.68
GTF2A1-201ENST00000298173 PYROXD2Q8N2H3 581 aa25.57■■□□□ 1.68
GTF2A1-201ENST00000298173 HDAC7Q8WUI4 952 aa25.57■■□□□ 1.68
GTF2A1-201ENST00000298173 KCTD15Q96SI1 283 aaPredicted RBP25.57■■□□□ 1.68
GTF2A1-201ENST00000298173 CDK5RAP1Q96SZ6 601 aaKnown RBP25.57■■□□□ 1.68
GTF2A1-201ENST00000298173 ZNF670Q9BS34 389 aa25.57■■□□□ 1.68
GTF2A1-201ENST00000298173 CALN1Q9BXU9 219 aa25.57■■□□□ 1.68
GTF2A1-201ENST00000298173 TKTL2Q9H0I9 626 aa25.57■■□□□ 1.68
GTF2A1-201ENST00000298173 ZNF334Q9HCZ1 680 aaPredicted RBP25.57■■□□□ 1.68
GTF2A1-201ENST00000298173 DENND4CQ5VZ89 1909 aa25.57■■□□□ 1.68
GTF2A1-201ENST00000298173 OBSL1O75147 1896 aa25.56■■□□□ 1.68
GTF2A1-201ENST00000298173 EPOPA6NHQ4 379 aa25.56■■□□□ 1.68
GTF2A1-201ENST00000298173 KCNU1A8MYU2 1149 aa25.56■■□□□ 1.68
GTF2A1-201ENST00000298173 MSI1O43347 362 aaKnown RBP25.56■■□□□ 1.68
GTF2A1-201ENST00000298173 TUBP50607 506 aa25.56■■□□□ 1.68
GTF2A1-201ENST00000298173 MMRN1Q13201 1228 aa25.56■■□□□ 1.68
GTF2A1-201ENST00000298173 KRT81Q14533 505 aa25.56■■□□□ 1.68
GTF2A1-201ENST00000298173 ERCC6LQ2NKX8 1250 aa25.56■■□□□ 1.68
GTF2A1-201ENST00000298173 ARL13BQ3SXY8 428 aa25.56■■□□□ 1.68
GTF2A1-201ENST00000298173 UBXN4Q92575 508 aa25.56■■□□□ 1.68
GTF2A1-201ENST00000298173 RNF157Q96PX1 679 aa25.56■■□□□ 1.68
GTF2A1-201ENST00000298173 EFEMP1Q12805 493 aa25.55■■□□□ 1.68
GTF2A1-201ENST00000298173 SEMA3BQ13214 749 aa25.55■■□□□ 1.68
GTF2A1-201ENST00000298173 EFHC2Q5JST6 749 aa25.55■■□□□ 1.68
GTF2A1-201ENST00000298173 C10orf120Q5SQS8 335 aa25.55■■□□□ 1.68
GTF2A1-201ENST00000298173 KAZNQ674X7 775 aa25.55■■□□□ 1.68
GTF2A1-201ENST00000298173 BBS12Q6ZW61 710 aa25.55■■□□□ 1.68
GTF2A1-201ENST00000298173 LRRC19Q9H756 370 aa25.55■■□□□ 1.68
GTF2A1-201ENST00000298173 SLTMQ9NWH9 1034 aaKnown RBP eCLIP25.55■■□□□ 1.68
GTF2A1-201ENST00000298173 MARCH2Q9P0N8 246 aa25.55■■□□□ 1.68
GTF2A1-201ENST00000298173 NOL12Q9UGY1 213 aaKnown RBP eCLIP25.55■■□□□ 1.68
GTF2A1-201ENST00000298173 V9GYY5 206 aaPredicted RBP25.55■■□□□ 1.68
GTF2A1-201ENST00000298173 GOLGA6L10A0A0M3HER8 536 aa25.55■■□□□ 1.68
GTF2A1-201ENST00000298173 ZMYND10O75800 440 aa25.55■■□□□ 1.68
GTF2A1-201ENST00000298173 EPCAMP16422 314 aa25.55■■□□□ 1.68
GTF2A1-201ENST00000298173 CCR1P32246 355 aa25.55■■□□□ 1.68
GTF2A1-201ENST00000298173 ANKRD20A8PQ5CZ79 823 aa25.55■■□□□ 1.68
GTF2A1-201ENST00000298173 PPP6R3Q5H9R7 873 aaPredicted RBP25.55■■□□□ 1.68
GTF2A1-201ENST00000298173 TEX35Q5T0J7 233 aa25.55■■□□□ 1.68
GTF2A1-201ENST00000298173 HECTD3Q5T447 861 aa25.55■■□□□ 1.68
GTF2A1-201ENST00000298173 TMC8Q8IU68 726 aa25.55■■□□□ 1.68
GTF2A1-201ENST00000298173 C12orf50Q8NA57 414 aaPredicted RBP25.55■■□□□ 1.68
GTF2A1-201ENST00000298173 FCRL2Q96LA5 508 aaPredicted RBP25.55■■□□□ 1.68
GTF2A1-201ENST00000298173 DDX47Q9H0S4 455 aaKnown RBP25.55■■□□□ 1.68
GTF2A1-201ENST00000298173 MAN1C1Q9NR34 630 aa25.55■■□□□ 1.68
GTF2A1-201ENST00000298173 CWC15Q9P013 229 aaKnown RBP25.55■■□□□ 1.68
GTF2A1-201ENST00000298173 RCOR3Q9P2K3 495 aaPredicted RBP25.55■■□□□ 1.68
GTF2A1-201ENST00000298173 PER2O15055 1255 aa25.54■■□□□ 1.68
GTF2A1-201ENST00000298173 IGLV3-27P01718 113 aa25.54■■□□□ 1.68
GTF2A1-201ENST00000298173 HOXA9P31269 272 aa25.54■■□□□ 1.68
GTF2A1-201ENST00000298173 ATP5C1P36542 298 aaKnown RBP25.54■■□□□ 1.68
GTF2A1-201ENST00000298173 SMAD3P84022 425 aaKnown RBP25.54■■□□□ 1.68
GTF2A1-201ENST00000298173 TRIP4Q15650 581 aaPredicted RBP25.54■■□□□ 1.68
GTF2A1-201ENST00000298173 PABPC1LQ4VXU2 614 aaKnown RBP25.54■■□□□ 1.68
GTF2A1-201ENST00000298173 PPM1LQ5SGD2 360 aa25.54■■□□□ 1.68
GTF2A1-201ENST00000298173 ADGRD2Q7Z7M1 963 aa25.54■■□□□ 1.68
GTF2A1-201ENST00000298173 PCDH19Q8TAB3 1148 aa25.54■■□□□ 1.68
GTF2A1-201ENST00000298173 RNF34Q969K3 372 aa25.54■■□□□ 1.68
GTF2A1-201ENST00000298173 HAPLN3Q96S86 360 aa25.54■■□□□ 1.68
GTF2A1-201ENST00000298173 KRT12Q99456 494 aa25.54■■□□□ 1.68
GTF2A1-201ENST00000298173 OSBPL2Q9H1P3 480 aa25.54■■□□□ 1.68
GTF2A1-201ENST00000298173 R3HDM2Q9Y2K5 976 aaKnown RBP25.54■■□□□ 1.68
GTF2A1-201ENST00000298173 DOCK6Q96HP0 2047 aa25.53■■□□□ 1.68
GTF2A1-201ENST00000298173 CST8O60676 142 aa25.53■■□□□ 1.68
GTF2A1-201ENST00000298173 OAS1P00973 400 aaKnown RBP25.53■■□□□ 1.68
GTF2A1-201ENST00000298173 TBX4P57082 545 aa25.53■■□□□ 1.68
GTF2A1-201ENST00000298173 TADA2BQ86TJ2 420 aa25.53■■□□□ 1.68
GTF2A1-201ENST00000298173 PQLC3Q8N755 202 aa25.53■■□□□ 1.68
GTF2A1-201ENST00000298173 GDPD5Q8WTR4 605 aa25.53■■□□□ 1.68
GTF2A1-201ENST00000298173 DNMT3LQ9UJW3 386 aa25.53■■□□□ 1.68
GTF2A1-201ENST00000298173 PDE4DIPQ5VU43 2346 aa25.53■■□□□ 1.68
GTF2A1-201ENST00000298173 COCHO43405 550 aa25.52■■□□□ 1.68
GTF2A1-201ENST00000298173 PHF2O75151 1096 aa25.52■■□□□ 1.68
GTF2A1-201ENST00000298173 SLC2A3P11169 496 aa25.52■■□□□ 1.68
GTF2A1-201ENST00000298173 RING1Q06587 406 aa25.52■■□□□ 1.68
GTF2A1-201ENST00000298173 CCNG2Q16589 344 aa25.52■■□□□ 1.68
GTF2A1-201ENST00000298173 SLC9A4Q6AI14 798 aa25.52■■□□□ 1.68
GTF2A1-201ENST00000298173 GAREM2Q75VX8 874 aa25.52■■□□□ 1.68
GTF2A1-201ENST00000298173 KLHL7Q8IXQ5 586 aa25.52■■□□□ 1.68
GTF2A1-201ENST00000298173 TIFAQ96CG3 184 aa25.52■■□□□ 1.68
GTF2A1-201ENST00000298173 CSPG4P5Q96PW8 444 aa25.52■■□□□ 1.68
GTF2A1-201ENST00000298173 LRRC1Q9BTT6 524 aa25.52■■□□□ 1.68
GTF2A1-201ENST00000298173 HOMER3Q9NSC5 361 aa25.52■■□□□ 1.68
GTF2A1-201ENST00000298173 HCFC2Q9Y5Z7 792 aa25.52■■□□□ 1.68
GTF2A1-201ENST00000298173 UQCRHLA0A096LP55 91 aa25.52■■□□□ 1.68
GTF2A1-201ENST00000298173 FAM72CH0Y354 149 aa25.52■■□□□ 1.68
GTF2A1-201ENST00000298173 RFPL2O75678 378 aa25.52■■□□□ 1.68
GTF2A1-201ENST00000298173 UQCRHP07919 91 aa25.52■■□□□ 1.68
GTF2A1-201ENST00000298173 CHRNA3P32297 505 aa25.52■■□□□ 1.68
GTF2A1-201ENST00000298173 HCAR3P49019 387 aa25.52■■□□□ 1.68
GTF2A1-201ENST00000298173 KPNA1P52294 538 aaPredicted RBP25.52■■□□□ 1.68
GTF2A1-201ENST00000298173 TFDP2Q14188 446 aa25.52■■□□□ 1.68
GTF2A1-201ENST00000298173 GLE1Q53GS7 698 aaKnown RBP25.52■■□□□ 1.68
GTF2A1-201ENST00000298173 FAM72AQ5TYM5 149 aa25.52■■□□□ 1.68
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms