RNA–Protein interactions for RNA: ENST00000297423.8

SPIDR-201, Transcript of scaffold protein involved in DNA repair, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SPIDR, Length 3,988 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-201ENST00000297423 KRT3P12035 628 aa15.33■□□□□ 0.04
SPIDR-201ENST00000297423 OSBPP22059 807 aa15.33■□□□□ 0.04
SPIDR-201ENST00000297423 MAGEA8P43361 318 aa15.33■□□□□ 0.04
SPIDR-201ENST00000297423 QARSP47897 775 aaKnown RBP15.33■□□□□ 0.04
SPIDR-201ENST00000297423 EIF2B2P49770 351 aaKnown RBP15.33■□□□□ 0.04
SPIDR-201ENST00000297423 TDRPQ86YL5 185 aa15.33■□□□□ 0.04
SPIDR-201ENST00000297423 TMIGD2Q96BF3 282 aa15.33■□□□□ 0.04
SPIDR-201ENST00000297423 SERPINI1Q99574 410 aa15.33■□□□□ 0.04
SPIDR-201ENST00000297423 HBS1LQ9Y450 684 aaKnown RBP15.33■□□□□ 0.04
SPIDR-201ENST00000297423 CNTNAP2Q9UHC6 1331 aa15.32■□□□□ 0.04
SPIDR-201ENST00000297423 A0A088AWK7 358 aa15.32■□□□□ 0.04
SPIDR-201ENST00000297423 SLC26A4O43511 780 aa15.32■□□□□ 0.04
SPIDR-201ENST00000297423 P4HBP07237 508 aaKnown RBP15.32■□□□□ 0.04
SPIDR-201ENST00000297423 KLHL35Q6PF15 583 aa15.32■□□□□ 0.04
SPIDR-201ENST00000297423 SNX32Q86XE0 403 aa15.32■□□□□ 0.04
SPIDR-201ENST00000297423 TNS4Q8IZW8 715 aa15.32■□□□□ 0.04
SPIDR-201ENST00000297423 MYO1HQ8N1T3 1032 aa15.32■□□□□ 0.04
SPIDR-201ENST00000297423 BHLHE22Q8NFJ8 381 aaPredicted RBP15.32■□□□□ 0.04
SPIDR-201ENST00000297423 MXRA8Q9BRK3 442 aa15.32■□□□□ 0.04
SPIDR-201ENST00000297423 DHX35Q9H5Z1 703 aaKnown RBP15.32■□□□□ 0.04
SPIDR-201ENST00000297423 GOLGB1Q14789 3259 aaKnown RBP15.32■□□□□ 0.04
SPIDR-201ENST00000297423 P4HA2O15460 535 aa15.32■□□□□ 0.04
SPIDR-201ENST00000297423 CRTAMO95727 393 aa15.32■□□□□ 0.04
SPIDR-201ENST00000297423 CDK4P11802 303 aa15.32■□□□□ 0.04
SPIDR-201ENST00000297423 EPHX2P34913 555 aa15.32■□□□□ 0.04
SPIDR-201ENST00000297423 SFSWAPQ12872 951 aaKnown RBP15.32■□□□□ 0.04
SPIDR-201ENST00000297423 BAATQ14032 418 aaPredicted RBP15.32■□□□□ 0.04
SPIDR-201ENST00000297423 PQLC1Q8N2U9 271 aa15.32■□□□□ 0.04
SPIDR-201ENST00000297423 TBC1D23Q9NUY8 699 aa15.32■□□□□ 0.04
SPIDR-201ENST00000297423 ZNF112Q9UJU3 913 aa15.32■□□□□ 0.04
SPIDR-201ENST00000297423 TBX20Q9UMR3 447 aa15.32■□□□□ 0.04
SPIDR-201ENST00000297423 ZBBXA8MT70 800 aa15.32■□□□□ 0.04
SPIDR-201ENST00000297423 MSLNQ13421 630 aaPredicted RBP15.32■□□□□ 0.04
SPIDR-201ENST00000297423 TAF5Q15542 800 aa15.32■□□□□ 0.04
SPIDR-201ENST00000297423 FASTKD5Q7L8L6 764 aaKnown RBP15.32■□□□□ 0.04
SPIDR-201ENST00000297423 TSPAN14Q8NG11 270 aa15.32■□□□□ 0.04
SPIDR-201ENST00000297423 TAAR1Q96RJ0 339 aa15.32■□□□□ 0.04
SPIDR-201ENST00000297423 CEP41Q9BYV8 373 aa15.32■□□□□ 0.04
SPIDR-201ENST00000297423 USP29Q9HBJ7 922 aa15.32■□□□□ 0.04
SPIDR-201ENST00000297423 AURKCQ9UQB9 309 aa15.32■□□□□ 0.04
SPIDR-201ENST00000297423 UBE4BO95155 1302 aa15.32■□□□□ 0.04
SPIDR-201ENST00000297423 PSME4Q14997 1843 aa15.31■□□□□ 0.04
SPIDR-201ENST00000297423 A0A1B0GTW7 788 aa15.31■□□□□ 0.04
SPIDR-201ENST00000297423 SIN3BO75182 1162 aa15.31■□□□□ 0.04
SPIDR-201ENST00000297423 MT-CO1P00395 513 aa15.31■□□□□ 0.04
SPIDR-201ENST00000297423 PLOD1Q02809 727 aaPredicted RBP15.31■□□□□ 0.04
SPIDR-201ENST00000297423 MTMR1Q13613 665 aa15.31■□□□□ 0.04
SPIDR-201ENST00000297423 PABPC1LQ4VXU2 614 aaKnown RBP15.31■□□□□ 0.04
SPIDR-201ENST00000297423 DLK2Q6UY11 383 aa15.31■□□□□ 0.04
SPIDR-201ENST00000297423 GPD1LQ8N335 351 aa15.31■□□□□ 0.04
SPIDR-201ENST00000297423 PHTF2Q8N3S3 785 aa15.31■□□□□ 0.04
SPIDR-201ENST00000297423 TMEM35BQ8NCS4 154 aa15.31■□□□□ 0.04
SPIDR-201ENST00000297423 PIWIL2Q8TC59 973 aaKnown RBP15.31■□□□□ 0.04
SPIDR-201ENST00000297423 ABHD8Q96I13 439 aa15.31■□□□□ 0.04
SPIDR-201ENST00000297423 MBOAT7Q96N66 472 aa15.31■□□□□ 0.04
SPIDR-201ENST00000297423 TEX13BQ9BXU2 312 aa15.31■□□□□ 0.04
SPIDR-201ENST00000297423 MRPL46Q9H2W6 279 aaKnown RBP15.31■□□□□ 0.04
SPIDR-201ENST00000297423 CCDC166P0CW27 439 aa15.31■□□□□ 0.04
SPIDR-201ENST00000297423 YBX3P16989 372 aaKnown RBP eCLIP15.31■□□□□ 0.04
SPIDR-201ENST00000297423 VGLL4Q14135 290 aa15.31■□□□□ 0.04
SPIDR-201ENST00000297423 DPYSL3Q14195 570 aa15.31■□□□□ 0.04
SPIDR-201ENST00000297423 PLEKHA7Q6IQ23 1121 aa15.31■□□□□ 0.04
SPIDR-201ENST00000297423 OLFML1Q6UWY5 402 aa15.31■□□□□ 0.04
SPIDR-201ENST00000297423 UNC5BQ8IZJ1 945 aa15.31■□□□□ 0.04
SPIDR-201ENST00000297423 CCNYL1Q8N7R7 359 aa15.31■□□□□ 0.04
SPIDR-201ENST00000297423 SYTL5Q8TDW5 730 aaPredicted RBP15.31■□□□□ 0.04
SPIDR-201ENST00000297423 WDR55Q9H6Y2 383 aaPredicted RBP15.31■□□□□ 0.04
SPIDR-201ENST00000297423 KCNH7Q9NS40 1196 aa15.31■□□□□ 0.04
SPIDR-201ENST00000297423 STX16-NPEPL1H3BU86 382 aa15.31■□□□□ 0.04
SPIDR-201ENST00000297423 MTA2O94776 668 aa15.31■□□□□ 0.04
SPIDR-201ENST00000297423 SERPINA6P08185 405 aa15.31■□□□□ 0.04
SPIDR-201ENST00000297423 OCM2P0CE71 109 aa15.31■□□□□ 0.04
SPIDR-201ENST00000297423 OCMP0CE72 109 aaPredicted RBP15.31■□□□□ 0.04
SPIDR-201ENST00000297423 RPL10P27635 214 aaKnown RBP15.31■□□□□ 0.04
SPIDR-201ENST00000297423 STIP1P31948 543 aaKnown RBP15.31■□□□□ 0.04
SPIDR-201ENST00000297423 NPTX2P47972 431 aa15.31■□□□□ 0.04
SPIDR-201ENST00000297423 SLC5A3P53794 718 aa15.31■□□□□ 0.04
SPIDR-201ENST00000297423 MTTPP55157 894 aa15.31■□□□□ 0.04
SPIDR-201ENST00000297423 TSPY1Q01534 308 aa15.31■□□□□ 0.04
SPIDR-201ENST00000297423 KLF1Q13351 362 aaPredicted RBP15.31■□□□□ 0.04
SPIDR-201ENST00000297423 NANOGNBQ7Z5D8 188 aa15.31■□□□□ 0.04
SPIDR-201ENST00000297423 ZBTB45Q96K62 511 aaPredicted RBP15.31■□□□□ 0.04
SPIDR-201ENST00000297423 HAUS8Q9BT25 410 aa15.31■□□□□ 0.04
SPIDR-201ENST00000297423 NR2E3Q9Y5X4 410 aa15.31■□□□□ 0.04
SPIDR-201ENST00000297423 hCG_1818297A0A087WSY0 165 aa15.3■□□□□ 0.04
SPIDR-201ENST00000297423 USP2O75604 605 aaPredicted RBP15.3■□□□□ 0.04
SPIDR-201ENST00000297423 RARRES1P49788 294 aa15.3■□□□□ 0.04
SPIDR-201ENST00000297423 CCNIQ14094 377 aa15.3■□□□□ 0.04
SPIDR-201ENST00000297423 C1orf220Q5T0J3 134 aa15.3■□□□□ 0.04
SPIDR-201ENST00000297423 TRMT10BQ6PF06 316 aaKnown RBP15.3■□□□□ 0.04
SPIDR-201ENST00000297423 FRMD7Q6ZUT3 714 aa15.3■□□□□ 0.04
SPIDR-201ENST00000297423 CDR2LQ86X02 465 aaPredicted RBP15.3■□□□□ 0.04
SPIDR-201ENST00000297423 ABRAQ8N0Z2 381 aa15.3■□□□□ 0.04
SPIDR-201ENST00000297423 ZNF606Q8WXB4 792 aa15.3■□□□□ 0.04
SPIDR-201ENST00000297423 MAP3K20Q9NYL2 800 aaKnown RBP15.3■□□□□ 0.04
SPIDR-201ENST00000297423 PLLPQ9Y342 182 aa15.3■□□□□ 0.04
SPIDR-201ENST00000297423 GTF3C5Q9Y5Q8 519 aaPredicted RBP15.3■□□□□ 0.04
SPIDR-201ENST00000297423 GREB1LQ9C091 1923 aaPredicted RBP15.3■□□□□ 0.04
SPIDR-201ENST00000297423 RNF103-CHMP3A0A140T963 221 aa15.3■□□□□ 0.04
SPIDR-201ENST00000297423 HAPLN3Q96S86 360 aa15.3■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms