RNA–Protein interactions for RNA: ENST00000296861.2

TNFRSF21-201, Transcript of TNF receptor superfamily member 21, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFRSF21, Length 3,595 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF21-201ENST00000296861 DDX55Q8NHQ9 600 aaKnown RBP eCLIP13.74□□□□□ -0.212e-12■■□□□ 13.9
TNFRSF21-201ENST00000296861 FAM136AQ96C01 138 aa13.74□□□□□ -0.21
TNFRSF21-201ENST00000296861 AS3MTQ9HBK9 375 aa13.74□□□□□ -0.21
TNFRSF21-201ENST00000296861 ANKRD12Q6UB98 2062 aa13.74□□□□□ -0.21
TNFRSF21-201ENST00000296861 CAPN8A6NHC0 703 aa13.74□□□□□ -0.21
TNFRSF21-201ENST00000296861 LYNP07948 512 aa13.74□□□□□ -0.21
TNFRSF21-201ENST00000296861 ARL1P40616 181 aaPredicted RBP13.74□□□□□ -0.21
TNFRSF21-201ENST00000296861 RAB27AP51159 221 aa13.74□□□□□ -0.21
TNFRSF21-201ENST00000296861 TAP1Q03518 808 aa13.74□□□□□ -0.21
TNFRSF21-201ENST00000296861 R3HDM1Q15032 1099 aaKnown RBP13.74□□□□□ -0.21
TNFRSF21-201ENST00000296861 PRKD1Q15139 912 aaPredicted RBP13.74□□□□□ -0.21
TNFRSF21-201ENST00000296861 EFHC1Q5JVL4 640 aa13.74□□□□□ -0.21
TNFRSF21-201ENST00000296861 PLLPQ9Y342 182 aa13.74□□□□□ -0.21
TNFRSF21-201ENST00000296861 CNTNAP1P78357 1384 aa13.74□□□□□ -0.21
TNFRSF21-201ENST00000296861 RARBP10826 455 aa13.73□□□□□ -0.21
TNFRSF21-201ENST00000296861 FGFR3P22607 806 aa13.73□□□□□ -0.21
TNFRSF21-201ENST00000296861 GMPSP49915 693 aaPredicted RBP13.73□□□□□ -0.21
TNFRSF21-201ENST00000296861 POU5F1BQ06416 359 aa13.73□□□□□ -0.21
TNFRSF21-201ENST00000296861 TMED1Q13445 227 aa13.73□□□□□ -0.21
TNFRSF21-201ENST00000296861 ACAP1Q15027 740 aa13.73□□□□□ -0.21
TNFRSF21-201ENST00000296861 DCAF6Q58WW2 860 aa13.73□□□□□ -0.21
TNFRSF21-201ENST00000296861 DPY19L2Q6NUT2 758 aa13.73□□□□□ -0.21
TNFRSF21-201ENST00000296861 TDRPQ86YL5 185 aa13.73□□□□□ -0.21
TNFRSF21-201ENST00000296861 B4GALNT2Q8NHY0 566 aa13.73□□□□□ -0.21
TNFRSF21-201ENST00000296861 SNRNP27Q8WVK2 155 aaKnown RBP13.73□□□□□ -0.21
TNFRSF21-201ENST00000296861 LRGUKQ96M69 825 aa13.73□□□□□ -0.21
TNFRSF21-201ENST00000296861 SOX13Q9UN79 622 aa13.73□□□□□ -0.21
TNFRSF21-201ENST00000296861 HNRNPCL1O60812 293 aaKnown RBP13.73□□□□□ -0.21
TNFRSF21-201ENST00000296861 PFDN1O60925 122 aa13.73□□□□□ -0.21
TNFRSF21-201ENST00000296861 OR6B1O95007 311 aa13.73□□□□□ -0.21
TNFRSF21-201ENST00000296861 SLC25A11Q02978 314 aaKnown RBP13.73□□□□□ -0.21
TNFRSF21-201ENST00000296861 CNGA3Q16281 694 aa13.73□□□□□ -0.21
TNFRSF21-201ENST00000296861 PLD5Q8N7P1 536 aa13.73□□□□□ -0.21
TNFRSF21-201ENST00000296861 ICA1LQ8NDH6 482 aa13.73□□□□□ -0.21
TNFRSF21-201ENST00000296861 OTUD5Q96G74 571 aa13.73□□□□□ -0.21
TNFRSF21-201ENST00000296861 RNF157Q96PX1 679 aa13.73□□□□□ -0.21
TNFRSF21-201ENST00000296861 CENPKQ9BS16 269 aa13.73□□□□□ -0.21
TNFRSF21-201ENST00000296861 CNPY3Q9BT09 278 aa13.73□□□□□ -0.21
TNFRSF21-201ENST00000296861 MRIQ9BWK5 157 aa13.73□□□□□ -0.21
TNFRSF21-201ENST00000296861 SDCBP2Q9H190 292 aa13.73□□□□□ -0.21
TNFRSF21-201ENST00000296861 MINDY3Q9H8M7 445 aa13.73□□□□□ -0.21
TNFRSF21-201ENST00000296861 KCNK13Q9HB14 408 aa13.73□□□□□ -0.21
TNFRSF21-201ENST00000296861 VCX3AQ9NNX9 186 aa13.73□□□□□ -0.21
TNFRSF21-201ENST00000296861 SLC39A10Q9ULF5 831 aa13.73□□□□□ -0.21
TNFRSF21-201ENST00000296861 SBF2Q86WG5 1849 aa13.73□□□□□ -0.21
TNFRSF21-201ENST00000296861 SLX4Q8IY92 1834 aa13.73□□□□□ -0.21
TNFRSF21-201ENST00000296861 XPO1O14980 1071 aaKnown RBP13.73□□□□□ -0.21
TNFRSF21-201ENST00000296861 TBL3Q12788 808 aaKnown RBP13.73□□□□□ -0.21
TNFRSF21-201ENST00000296861 PDPK2PQ6A1A2 396 aa13.73□□□□□ -0.21
TNFRSF21-201ENST00000296861 C15orf39Q6ZRI6 1047 aa13.73□□□□□ -0.21
TNFRSF21-201ENST00000296861 MED10Q9BTT4 135 aa13.73□□□□□ -0.21
TNFRSF21-201ENST00000296861 KRT82Q9NSB4 513 aa13.73□□□□□ -0.21
TNFRSF21-201ENST00000296861 STX18Q9P2W9 335 aaKnown RBP13.73□□□□□ -0.21
TNFRSF21-201ENST00000296861 MAGEB2O15479 319 aa13.72□□□□□ -0.21
TNFRSF21-201ENST00000296861 TPST1O60507 370 aa13.72□□□□□ -0.21
TNFRSF21-201ENST00000296861 SEC24DO94855 1032 aaPredicted RBP13.72□□□□□ -0.21
TNFRSF21-201ENST00000296861 LSM8O95777 96 aaKnown RBP13.72□□□□□ -0.21
TNFRSF21-201ENST00000296861 AMHP03971 560 aa13.72□□□□□ -0.21
TNFRSF21-201ENST00000296861 AQP4P55087 323 aa13.72□□□□□ -0.21
TNFRSF21-201ENST00000296861 RTP1P59025 263 aa13.72□□□□□ -0.21
TNFRSF21-201ENST00000296861 PRAMEP78395 509 aa13.72□□□□□ -0.21
TNFRSF21-201ENST00000296861 ART3Q13508 389 aa13.72□□□□□ -0.21
TNFRSF21-201ENST00000296861 TCEAL1Q15170 157 aa13.72□□□□□ -0.21
TNFRSF21-201ENST00000296861 DNAL1Q4LDG9 190 aa13.72□□□□□ -0.21
TNFRSF21-201ENST00000296861 HSP90AA5PQ58FG0 334 aa13.72□□□□□ -0.21
TNFRSF21-201ENST00000296861 SPDYAQ5MJ70 313 aa13.72□□□□□ -0.21
TNFRSF21-201ENST00000296861 TMCO4Q5TGY1 634 aa13.72□□□□□ -0.21
TNFRSF21-201ENST00000296861 GALNT15Q8N3T1 639 aa13.72□□□□□ -0.21
TNFRSF21-201ENST00000296861 C1orf127Q8N9H9 656 aa13.72□□□□□ -0.21
TNFRSF21-201ENST00000296861 ECSITQ9BQ95 431 aa13.72□□□□□ -0.21
TNFRSF21-201ENST00000296861 SEMA6AQ9H2E6 1030 aa13.72□□□□□ -0.21
TNFRSF21-201ENST00000296861 EURLQ9NYK6 297 aa13.72□□□□□ -0.21
TNFRSF21-201ENST00000296861 FNDC3AQ9Y2H6 1198 aaKnown RBP13.72□□□□□ -0.21
TNFRSF21-201ENST00000296861 FARP1Q9Y4F1 1045 aaPredicted RBP13.72□□□□□ -0.21
TNFRSF21-201ENST00000296861 ARFGEF1Q9Y6D6 1849 aa13.72□□□□□ -0.21
TNFRSF21-201ENST00000296861 NDC80O14777 642 aa13.72□□□□□ -0.21
TNFRSF21-201ENST00000296861 EPHA3P29320 983 aa13.72□□□□□ -0.21
TNFRSF21-201ENST00000296861 CCR10P46092 362 aa13.72□□□□□ -0.21
TNFRSF21-201ENST00000296861 CDC16Q13042 620 aa13.72□□□□□ -0.21
TNFRSF21-201ENST00000296861 DCAF15Q66K64 600 aa13.72□□□□□ -0.21
TNFRSF21-201ENST00000296861 RNF169Q8NCN4 708 aa13.72□□□□□ -0.21
TNFRSF21-201ENST00000296861 FERMT1Q9BQL6 677 aa13.72□□□□□ -0.21
TNFRSF21-201ENST00000296861 OXCT2Q9BYC2 517 aaPredicted RBP13.72□□□□□ -0.21
TNFRSF21-201ENST00000296861 ZNF408Q9H9D4 720 aa13.72□□□□□ -0.21
TNFRSF21-201ENST00000296861 HBS1LQ9Y450 684 aaKnown RBP13.72□□□□□ -0.21
TNFRSF21-201ENST00000296861 PSAT1Q9Y617 370 aa13.72□□□□□ -0.21
TNFRSF21-201ENST00000296861 PHGDHO43175 533 aaKnown RBP13.72□□□□□ -0.21
TNFRSF21-201ENST00000296861 PAPSS1O43252 624 aaPredicted RBP13.72□□□□□ -0.21
TNFRSF21-201ENST00000296861 TXNP10599 105 aaKnown RBP13.72□□□□□ -0.21
TNFRSF21-201ENST00000296861 RALBP11234 206 aa13.72□□□□□ -0.21
TNFRSF21-201ENST00000296861 CCDC130P13994 396 aa13.72□□□□□ -0.21
TNFRSF21-201ENST00000296861 CCNG1P51959 295 aa13.72□□□□□ -0.21
TNFRSF21-201ENST00000296861 NME5P56597 212 aa13.72□□□□□ -0.21
TNFRSF21-201ENST00000296861 LBRQ14739 615 aaKnown RBP13.72□□□□□ -0.21
TNFRSF21-201ENST00000296861 TMEM132DQ14C87 1099 aa13.72□□□□□ -0.21
TNFRSF21-201ENST00000296861 SH2D4BQ5SQS7 431 aa13.72□□□□□ -0.21
TNFRSF21-201ENST00000296861 LRRC38Q5VT99 294 aa13.72□□□□□ -0.21
TNFRSF21-201ENST00000296861 MPZL3Q6UWV2 235 aa13.72□□□□□ -0.21
TNFRSF21-201ENST00000296861 RYBPQ8N488 228 aaPredicted RBP13.72□□□□□ -0.21
TNFRSF21-201ENST00000296861 COLGALT1Q8NBJ5 622 aa13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms