RNA–Protein interactions for RNA: ENST00000296550.11

DCLK2-201, Transcript of doublecortin like kinase 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene DCLK2, Length 4,265 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DCLK2-201ENST00000296550 PABPC5Q96DU9 382 aaKnown RBP16.8■□□□□ 0.28
DCLK2-201ENST00000296550 SGF29Q96ES7 293 aa16.8■□□□□ 0.28
DCLK2-201ENST00000296550 IFT43Q96FT9 208 aa16.8■□□□□ 0.28
DCLK2-201ENST00000296550 TYW5A2RUC4 315 aaKnown RBP16.8■□□□□ 0.28
DCLK2-201ENST00000296550 PSMD3O43242 534 aa16.8■□□□□ 0.28
DCLK2-201ENST00000296550 CASP2P42575 452 aa16.8■□□□□ 0.28
DCLK2-201ENST00000296550 ACVR2BQ13705 512 aa16.8■□□□□ 0.28
DCLK2-201ENST00000296550 DRICH1Q6PGQ1 229 aaPredicted RBP16.8■□□□□ 0.28
DCLK2-201ENST00000296550 APBB2Q92870 758 aa16.8■□□□□ 0.28
DCLK2-201ENST00000296550 TELO2Q9Y4R8 837 aa16.8■□□□□ 0.28
DCLK2-201ENST00000296550 CPA3P15088 417 aa16.79■□□□□ 0.28
DCLK2-201ENST00000296550 TMEM154Q6P9G4 183 aa16.79■□□□□ 0.28
DCLK2-201ENST00000296550 CRELD2Q6UXH1 353 aaPredicted RBP16.79■□□□□ 0.28
DCLK2-201ENST00000296550 UNC93AQ86WB7 457 aa16.79■□□□□ 0.28
DCLK2-201ENST00000296550 SCUBE1Q8IWY4 988 aa16.79■□□□□ 0.28
DCLK2-201ENST00000296550 STKLD1Q8NE28 680 aa16.79■□□□□ 0.28
DCLK2-201ENST00000296550 RAET1EQ8TD07 263 aa16.79■□□□□ 0.28
DCLK2-201ENST00000296550 EDEM1Q92611 657 aa16.79■□□□□ 0.28
DCLK2-201ENST00000296550 PCDH18Q9HCL0 1135 aa16.79■□□□□ 0.28
DCLK2-201ENST00000296550 TJP2Q9UDY2 1190 aa16.79■□□□□ 0.28
DCLK2-201ENST00000296550 PRG3Q9Y2Y8 225 aaPredicted RBP16.79■□□□□ 0.28
DCLK2-201ENST00000296550 DOCK2Q92608 1830 aa16.79■□□□□ 0.28
DCLK2-201ENST00000296550 FAM237BA0A1B0GVD1 139 aa16.79■□□□□ 0.28
DCLK2-201ENST00000296550 TSHRP16473 764 aa16.79■□□□□ 0.28
DCLK2-201ENST00000296550 THPOP40225 353 aa16.79■□□□□ 0.28
DCLK2-201ENST00000296550 WASHC2DQ5SRD0 308 aa16.79■□□□□ 0.28
DCLK2-201ENST00000296550 SPON2Q9BUD6 331 aa16.79■□□□□ 0.28
DCLK2-201ENST00000296550 DDX43Q9NXZ2 648 aaKnown RBP16.79■□□□□ 0.28
DCLK2-201ENST00000296550 PRPF4O43172 522 aaKnown RBP eCLIP16.79■□□□□ 0.28
DCLK2-201ENST00000296550 F9P00740 461 aa16.79■□□□□ 0.28
DCLK2-201ENST00000296550 YY1P25490 414 aa16.79■□□□□ 0.28
DCLK2-201ENST00000296550 MLH1P40692 756 aa16.79■□□□□ 0.28
DCLK2-201ENST00000296550 GDF10P55107 478 aa16.79■□□□□ 0.28
DCLK2-201ENST00000296550 BNIP1Q12981 228 aa16.79■□□□□ 0.28
DCLK2-201ENST00000296550 ITGA9Q13797 1035 aa16.79■□□□□ 0.28
DCLK2-201ENST00000296550 ANKRD20A4Q4UJ75 823 aa16.79■□□□□ 0.28
DCLK2-201ENST00000296550 ANKRD20A2Q5SQ80 823 aa16.79■□□□□ 0.28
DCLK2-201ENST00000296550 ANKRD20A1Q5TYW2 823 aa16.79■□□□□ 0.28
DCLK2-201ENST00000296550 ELMO2Q96JJ3 720 aa16.79■□□□□ 0.28
DCLK2-201ENST00000296550 KCNK16Q96T55 309 aa16.79■□□□□ 0.28
DCLK2-201ENST00000296550 SYT11Q9BT88 431 aa16.79■□□□□ 0.28
DCLK2-201ENST00000296550 TAGLN3Q9UI15 199 aa16.79■□□□□ 0.28
DCLK2-201ENST00000296550 CASQ2O14958 399 aaPredicted RBP16.79■□□□□ 0.28
DCLK2-201ENST00000296550 HOXC6P09630 235 aa16.79■□□□□ 0.28
DCLK2-201ENST00000296550 HOXD10P28358 340 aa16.79■□□□□ 0.28
DCLK2-201ENST00000296550 LCLAT1Q6UWP7 414 aa16.79■□□□□ 0.28
DCLK2-201ENST00000296550 GLB1LQ6UWU2 654 aa16.79■□□□□ 0.28
DCLK2-201ENST00000296550 MYLK4Q86YV6 388 aaPredicted RBP16.79■□□□□ 0.28
DCLK2-201ENST00000296550 GP5P40197 560 aa16.78■□□□□ 0.28
DCLK2-201ENST00000296550 BST1Q10588 318 aa16.78■□□□□ 0.28
DCLK2-201ENST00000296550 FSTL1Q12841 308 aa16.78■□□□□ 0.28
DCLK2-201ENST00000296550 MPP3Q13368 585 aa16.78■□□□□ 0.28
DCLK2-201ENST00000296550 TRIP10Q15642 601 aa16.78■□□□□ 0.28
DCLK2-201ENST00000296550 SLC25A41Q8N5S1 370 aa16.78■□□□□ 0.28
DCLK2-201ENST00000296550 SERBP1Q8NC51 408 aaKnown RBP eCLIP16.78■□□□□ 0.28
DCLK2-201ENST00000296550 MRPL45Q9BRJ2 306 aaKnown RBP16.78■□□□□ 0.28
DCLK2-201ENST00000296550 UPF3AQ9H1J1 476 aaKnown RBP16.78■□□□□ 0.28
DCLK2-201ENST00000296550 IARS2Q9NSE4 1012 aaKnown RBP16.78■□□□□ 0.28
DCLK2-201ENST00000296550 ARHGEF38Q9NXL2 777 aa16.78■□□□□ 0.28
DCLK2-201ENST00000296550 DLGAP2Q9P1A6 1054 aa16.78■□□□□ 0.28
DCLK2-201ENST00000296550 VANGL2Q9ULK5 521 aa16.78■□□□□ 0.28
DCLK2-201ENST00000296550 SNCAIPQ9Y6H5 919 aa16.78■□□□□ 0.28
DCLK2-201ENST00000296550 GRK2P25098 689 aa16.78■□□□□ 0.28
DCLK2-201ENST00000296550 GLRBP48167 497 aa16.78■□□□□ 0.28
DCLK2-201ENST00000296550 TBCCQ15814 346 aa16.78■□□□□ 0.28
DCLK2-201ENST00000296550 PRAMEF19Q5SWL8 479 aa16.78■□□□□ 0.28
DCLK2-201ENST00000296550 FAM43BQ6ZT52 329 aaPredicted RBP16.78■□□□□ 0.28
DCLK2-201ENST00000296550 ANKS1BQ7Z6G8 1248 aa16.78■□□□□ 0.28
DCLK2-201ENST00000296550 PIGZQ86VD9 579 aa16.78■□□□□ 0.28
DCLK2-201ENST00000296550 TMEM192Q8IY95 271 aa16.78■□□□□ 0.28
DCLK2-201ENST00000296550 NETO2Q8NC67 525 aa16.78■□□□□ 0.28
DCLK2-201ENST00000296550 STK32AQ8WU08 396 aa16.78■□□□□ 0.28
DCLK2-201ENST00000296550 ZNF670Q9BS34 389 aa16.78■□□□□ 0.28
DCLK2-201ENST00000296550 ILKAPQ9H0C8 392 aaPredicted RBP16.78■□□□□ 0.28
DCLK2-201ENST00000296550 THAP1Q9NVV9 213 aa16.78■□□□□ 0.28
DCLK2-201ENST00000296550 BCORQ6W2J9 1755 aa16.78■□□□□ 0.28
DCLK2-201ENST00000296550 BNIP3LO60238 219 aa16.78■□□□□ 0.28
DCLK2-201ENST00000296550 RGS20O76081 388 aa16.78■□□□□ 0.28
DCLK2-201ENST00000296550 TPH1P17752 444 aa16.78■□□□□ 0.28
DCLK2-201ENST00000296550 FOXN2P32314 431 aa16.78■□□□□ 0.28
DCLK2-201ENST00000296550 SERPINB8P50452 374 aa16.78■□□□□ 0.28
DCLK2-201ENST00000296550 WDR4P57081 412 aaKnown RBP16.78■□□□□ 0.28
DCLK2-201ENST00000296550 SLC12A1Q13621 1099 aa16.78■□□□□ 0.28
DCLK2-201ENST00000296550 SYT15Q9BQS2 421 aa16.78■□□□□ 0.28
DCLK2-201ENST00000296550 RNPEPL1Q9HAU8 725 aa16.78■□□□□ 0.28
DCLK2-201ENST00000296550 TIMM44O43615 452 aa16.77■□□□□ 0.28
DCLK2-201ENST00000296550 DGKIO75912 1065 aa16.77■□□□□ 0.28
DCLK2-201ENST00000296550 KCNA3P22001 575 aa16.77■□□□□ 0.28
DCLK2-201ENST00000296550 ATXN3P54252 364 aaPredicted RBP16.77■□□□□ 0.28
DCLK2-201ENST00000296550 MRPS35P82673 323 aaKnown RBP16.77■□□□□ 0.28
DCLK2-201ENST00000296550 OGDHQ02218 1023 aa16.77■□□□□ 0.28
DCLK2-201ENST00000296550 EMC10Q5UCC4 262 aa16.77■□□□□ 0.28
DCLK2-201ENST00000296550 TLK2Q86UE8 772 aa16.77■□□□□ 0.28
DCLK2-201ENST00000296550 TMPRSS6Q8IU80 811 aa16.77■□□□□ 0.28
DCLK2-201ENST00000296550 PLD5Q8N7P1 536 aa16.77■□□□□ 0.28
DCLK2-201ENST00000296550 CELF6Q96J87 481 aaKnown RBP16.77■□□□□ 0.28
DCLK2-201ENST00000296550 A0A0A0MRY4 1105 aa16.77■□□□□ 0.28
DCLK2-201ENST00000296550 C2CD2LO14523 706 aa16.77■□□□□ 0.28
DCLK2-201ENST00000296550 THP07101 528 aa16.77■□□□□ 0.28
DCLK2-201ENST00000296550 ASPAP45381 313 aa16.77■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms