RNA–Protein interactions for RNA: ENST00000296302.11

PBRM1-201, Transcript of polybromo 1, humanhuman

TSL 1 (best) BASIC

Gene PBRM1, Length 5,145 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBRM1-201ENST00000296302 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.31□□□□□ -0.6
PBRM1-201ENST00000296302 EID3Q8N140 333 aa11.31□□□□□ -0.6
PBRM1-201ENST00000296302 C19orf18Q8NEA5 215 aa11.31□□□□□ -0.6
PBRM1-201ENST00000296302 TSPAN14Q8NG11 270 aa11.31□□□□□ -0.6
PBRM1-201ENST00000296302 ZNF606Q8WXB4 792 aa11.31□□□□□ -0.6
PBRM1-201ENST00000296302 FAM120BQ96EK7 910 aaKnown RBP11.31□□□□□ -0.6
PBRM1-201ENST00000296302 COQ7Q99807 217 aa11.31□□□□□ -0.6
PBRM1-201ENST00000296302 ERAP1Q9NZ08 941 aa11.31□□□□□ -0.6
PBRM1-201ENST00000296302 AFF2P51816 1311 aa11.31□□□□□ -0.6
PBRM1-201ENST00000296302 IQGAP1P46940 1657 aa11.31□□□□□ -0.6
PBRM1-201ENST00000296302 GH1P01241 217 aa11.31□□□□□ -0.6
PBRM1-201ENST00000296302 MRPS22P82650 360 aaKnown RBP11.31□□□□□ -0.6
PBRM1-201ENST00000296302 ACAP1Q15027 740 aa11.31□□□□□ -0.6
PBRM1-201ENST00000296302 RGS21Q2M5E4 152 aa11.31□□□□□ -0.6
PBRM1-201ENST00000296302 TRPC7Q9HCX4 862 aa11.31□□□□□ -0.6
PBRM1-201ENST00000296302 LINC00854A0A1B0GVQ3 168 aa11.31□□□□□ -0.6
PBRM1-201ENST00000296302 TBKBP1A7MCY6 615 aa11.31□□□□□ -0.6
PBRM1-201ENST00000296302 APOC4-APOC2K7ER74 178 aa11.31□□□□□ -0.6
PBRM1-201ENST00000296302 IFNA14P01570 189 aa11.31□□□□□ -0.6
PBRM1-201ENST00000296302 APOC2P02655 101 aa11.31□□□□□ -0.6
PBRM1-201ENST00000296302 TKTP29401 623 aaKnown RBP11.31□□□□□ -0.6
PBRM1-201ENST00000296302 SOAT1P35610 550 aa11.31□□□□□ -0.6
PBRM1-201ENST00000296302 CD151P48509 253 aa11.31□□□□□ -0.6
PBRM1-201ENST00000296302 NR2C2P49116 596 aa11.31□□□□□ -0.6
PBRM1-201ENST00000296302 PSMC6P62333 389 aa11.31□□□□□ -0.6
PBRM1-201ENST00000296302 EPS8Q12929 822 aa11.31□□□□□ -0.6
PBRM1-201ENST00000296302 C1DQ13901 141 aaKnown RBP11.31□□□□□ -0.6
PBRM1-201ENST00000296302 OTUD3Q5T2D3 398 aaPredicted RBP11.31□□□□□ -0.6
PBRM1-201ENST00000296302 TMEM176AQ96HP8 235 aa11.31□□□□□ -0.6
PBRM1-201ENST00000296302 SEPHS2Q99611 448 aa11.31□□□□□ -0.6
PBRM1-201ENST00000296302 APOL4Q9BPW4 351 aa11.31□□□□□ -0.6
PBRM1-201ENST00000296302 NUDT12Q9BQG2 462 aa11.31□□□□□ -0.6
PBRM1-201ENST00000296302 UGT2B28Q9BY64 529 aa11.31□□□□□ -0.6
PBRM1-201ENST00000296302 NMRK1Q9NWW6 199 aa11.31□□□□□ -0.6
PBRM1-201ENST00000296302 GGA3Q9NZ52 723 aa11.31□□□□□ -0.6
PBRM1-201ENST00000296302 KRT87PA6NCN2 255 aa11.31□□□□□ -0.6
PBRM1-201ENST00000296302 FAM20BO75063 409 aa11.31□□□□□ -0.6
PBRM1-201ENST00000296302 PLIN5Q00G26 463 aa11.31□□□□□ -0.6
PBRM1-201ENST00000296302 TWF1Q12792 350 aa11.31□□□□□ -0.6
PBRM1-201ENST00000296302 TMEM26Q6ZUK4 368 aa11.31□□□□□ -0.6
PBRM1-201ENST00000296302 DCP1BQ8IZD4 617 aaKnown RBP11.31□□□□□ -0.6
PBRM1-201ENST00000296302 SREK1IP1Q8N9Q2 155 aaPredicted RBP11.31□□□□□ -0.6
PBRM1-201ENST00000296302 CHST13Q8NET6 341 aa11.31□□□□□ -0.6
PBRM1-201ENST00000296302 BAP1Q92560 729 aa11.31□□□□□ -0.6
PBRM1-201ENST00000296302 C19orf60Q96EN9 201 aa11.31□□□□□ -0.6
PBRM1-201ENST00000296302 STN1Q9H668 368 aaKnown RBP11.31□□□□□ -0.6
PBRM1-201ENST00000296302 NOL6Q9H6R4 1146 aaKnown RBP11.31□□□□□ -0.6
PBRM1-201ENST00000296302 PIM2Q9P1W9 311 aa11.31□□□□□ -0.6
PBRM1-201ENST00000296302 CCDC130P13994 396 aa11.3□□□□□ -0.6
PBRM1-201ENST00000296302 NOTUMQ6P988 496 aa11.3□□□□□ -0.6
PBRM1-201ENST00000296302 BLOC1S5Q8TDH9 187 aa11.3□□□□□ -0.6
PBRM1-201ENST00000296302 TRPC4APQ8TEL6 797 aa11.3□□□□□ -0.6
PBRM1-201ENST00000296302 GMCL1Q96IK5 515 aa11.3□□□□□ -0.6
PBRM1-201ENST00000296302 RNPEPQ9H4A4 650 aa11.3□□□□□ -0.6
PBRM1-201ENST00000296302 UBAP1Q9NZ09 502 aa11.3□□□□□ -0.6
PBRM1-201ENST00000296302 STK39Q9UEW8 545 aa11.3□□□□□ -0.6
PBRM1-201ENST00000296302 CD163L1Q9NR16 1453 aa11.3□□□□□ -0.6
PBRM1-201ENST00000296302 DYTNA2CJ06 578 aa11.3□□□□□ -0.6
PBRM1-201ENST00000296302 VPS4BO75351 444 aa11.3□□□□□ -0.6
PBRM1-201ENST00000296302 ZNF682O95780 498 aa11.3□□□□□ -0.6
PBRM1-201ENST00000296302 PBX1P40424 430 aa11.3□□□□□ -0.6
PBRM1-201ENST00000296302 NPY2RP49146 381 aa11.3□□□□□ -0.6
PBRM1-201ENST00000296302 CDH17Q12864 832 aa11.3□□□□□ -0.6
PBRM1-201ENST00000296302 MSLNQ13421 630 aaPredicted RBP11.3□□□□□ -0.6
PBRM1-201ENST00000296302 DDR2Q16832 855 aa11.3□□□□□ -0.6
PBRM1-201ENST00000296302 ZNF618Q5T7W0 954 aa11.3□□□□□ -0.6
PBRM1-201ENST00000296302 ARCQ7LC44 396 aa11.3□□□□□ -0.6
PBRM1-201ENST00000296302 FBXW8Q8N3Y1 598 aa11.3□□□□□ -0.6
PBRM1-201ENST00000296302 RNF148Q8N7C7 305 aa11.3□□□□□ -0.6
PBRM1-201ENST00000296302 PRELID2Q8N945 189 aa11.3□□□□□ -0.6
PBRM1-201ENST00000296302 BHLHE22Q8NFJ8 381 aaPredicted RBP11.3□□□□□ -0.6
PBRM1-201ENST00000296302 OR6J1Q8NGC5 347 aa11.3□□□□□ -0.6
PBRM1-201ENST00000296302 LENG1Q96BZ8 264 aaPredicted RBP11.3□□□□□ -0.6
PBRM1-201ENST00000296302 OMA1Q96E52 524 aa11.3□□□□□ -0.6
PBRM1-201ENST00000296302 WDR41Q9HAD4 459 aa11.3□□□□□ -0.6
PBRM1-201ENST00000296302 ATXN10Q9UBB4 475 aa11.3□□□□□ -0.6
PBRM1-201ENST00000296302 CEP152O94986 1710 aa11.3□□□□□ -0.6
PBRM1-201ENST00000296302 CBFA2T3O75081 653 aa11.3□□□□□ -0.6
PBRM1-201ENST00000296302 ETFBP38117 255 aa11.3□□□□□ -0.6
PBRM1-201ENST00000296302 MYL6P60660 151 aa11.3□□□□□ -0.6
PBRM1-201ENST00000296302 DPYSL3Q14195 570 aa11.3□□□□□ -0.6
PBRM1-201ENST00000296302 SPANXN2Q5MJ10 180 aa11.3□□□□□ -0.6
PBRM1-201ENST00000296302 FOXR2Q6PJQ5 311 aa11.3□□□□□ -0.6
PBRM1-201ENST00000296302 LRRC55Q6ZSA7 311 aa11.3□□□□□ -0.6
PBRM1-201ENST00000296302 ZCCHC23Q6ZST2 131 aa11.3□□□□□ -0.6
PBRM1-201ENST00000296302 TLK2Q86UE8 772 aa11.3□□□□□ -0.6
PBRM1-201ENST00000296302 CHSY1Q86X52 802 aa11.3□□□□□ -0.6
PBRM1-201ENST00000296302 MUC3BQ9H195 1237 aa11.3□□□□□ -0.6
PBRM1-201ENST00000296302 CLIC5Q9NZA1 410 aa11.3□□□□□ -0.6
PBRM1-201ENST00000296302 C6orf203Q9P0P8 240 aaPredicted RBP11.3□□□□□ -0.6
PBRM1-201ENST00000296302 SPASTQ9UBP0 616 aa11.3□□□□□ -0.6
PBRM1-201ENST00000296302 ZNF70Q9UC06 446 aaPredicted RBP11.3□□□□□ -0.6
PBRM1-201ENST00000296302 WDR27A2RRH5 827 aa11.3□□□□□ -0.6
PBRM1-201ENST00000296302 FBXO21O94952 628 aa11.3□□□□□ -0.6
PBRM1-201ENST00000296302 MFN2O95140 757 aa11.3□□□□□ -0.6
PBRM1-201ENST00000296302 CYBBP04839 570 aa11.3□□□□□ -0.6
PBRM1-201ENST00000296302 DNAJB2P25686 324 aa11.3□□□□□ -0.6
PBRM1-201ENST00000296302 IL12RB1P42701 662 aa11.3□□□□□ -0.6
PBRM1-201ENST00000296302 RPL14P50914 215 aaKnown RBP11.3□□□□□ -0.6
PBRM1-201ENST00000296302 FRG1Q14331 258 aaKnown RBP11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms