RNA–Protein interactions for RNA: ENST00000287766.8

SLC6A1-201, Transcript of solute carrier family 6 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC6A1, Length 4,502 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A1-201ENST00000287766 FLCNQ8NFG4 579 aa12.91□□□□□ -0.34
SLC6A1-201ENST00000287766 TFB1MQ8WVM0 346 aaKnown RBP12.91□□□□□ -0.34
SLC6A1-201ENST00000287766 ZNF516Q92618 1163 aa12.91□□□□□ -0.34
SLC6A1-201ENST00000287766 TBC1D10AQ9BXI6 508 aa12.91□□□□□ -0.34
SLC6A1-201ENST00000287766 ACO1P21399 889 aaKnown RBP12.91□□□□□ -0.34
SLC6A1-201ENST00000287766 EIF4BP23588 611 aaKnown RBP12.91□□□□□ -0.34
SLC6A1-201ENST00000287766 PTDSS1P48651 473 aaKnown RBP12.91□□□□□ -0.34
SLC6A1-201ENST00000287766 ACAP1Q15027 740 aa12.91□□□□□ -0.34
SLC6A1-201ENST00000287766 WASHC2DQ5SRD0 308 aa12.91□□□□□ -0.34
SLC6A1-201ENST00000287766 UBAP2Q5T6F2 1119 aaKnown RBP12.91□□□□□ -0.34
SLC6A1-201ENST00000287766 OLFML1Q6UWY5 402 aa12.91□□□□□ -0.34
SLC6A1-201ENST00000287766 TRABD2AQ86V40 505 aa12.91□□□□□ -0.34
SLC6A1-201ENST00000287766 IPMKQ8NFU5 416 aa12.91□□□□□ -0.34
SLC6A1-201ENST00000287766 MECRQ9BV79 373 aa12.91□□□□□ -0.34
SLC6A1-201ENST00000287766 PPCSQ9HAB8 311 aa12.91□□□□□ -0.34
SLC6A1-201ENST00000287766 TMEM191CA6NGB0 347 aa12.91□□□□□ -0.34
SLC6A1-201ENST00000287766 RGS5O15539 181 aa12.91□□□□□ -0.34
SLC6A1-201ENST00000287766 OCM2P0CE71 109 aa12.91□□□□□ -0.34
SLC6A1-201ENST00000287766 OCMP0CE72 109 aaPredicted RBP12.91□□□□□ -0.34
SLC6A1-201ENST00000287766 TPH1P17752 444 aa12.91□□□□□ -0.34
SLC6A1-201ENST00000287766 MMP8P22894 467 aa12.91□□□□□ -0.34
SLC6A1-201ENST00000287766 SERPINB5P36952 375 aa12.91□□□□□ -0.34
SLC6A1-201ENST00000287766 TAF5Q15542 800 aa12.91□□□□□ -0.34
SLC6A1-201ENST00000287766 TJAP1Q5JTD0 557 aa12.91□□□□□ -0.34
SLC6A1-201ENST00000287766 FKBP1CQ5VVH2 108 aa12.91□□□□□ -0.34
SLC6A1-201ENST00000287766 TXNRD3NBQ6F5E7 133 aa12.91□□□□□ -0.34
SLC6A1-201ENST00000287766 CLVS1Q8IUQ0 354 aaPredicted RBP12.91□□□□□ -0.34
SLC6A1-201ENST00000287766 GLIS1Q8NBF1 620 aa12.91□□□□□ -0.34
SLC6A1-201ENST00000287766 TTC8Q8TAM2 541 aa12.91□□□□□ -0.34
SLC6A1-201ENST00000287766 PDCD6IPQ8WUM4 868 aaKnown RBP12.91□□□□□ -0.34
SLC6A1-201ENST00000287766 MAML3Q96JK9 1138 aa12.91□□□□□ -0.34
SLC6A1-201ENST00000287766 ZNF560Q96MR9 790 aa12.91□□□□□ -0.34
SLC6A1-201ENST00000287766 FAM210AQ96ND0 272 aa12.91□□□□□ -0.34
SLC6A1-201ENST00000287766 GRIP2Q9C0E4 1043 aa12.91□□□□□ -0.34
SLC6A1-201ENST00000287766 COG4Q9H9E3 785 aa12.91□□□□□ -0.34
SLC6A1-201ENST00000287766 H0YGN5 161 aa12.9□□□□□ -0.34
SLC6A1-201ENST00000287766 DHX15O43143 795 aaKnown RBP12.9□□□□□ -0.34
SLC6A1-201ENST00000287766 SPAG6O75602 509 aa12.9□□□□□ -0.34
SLC6A1-201ENST00000287766 ALBP02768 609 aa12.9□□□□□ -0.34
SLC6A1-201ENST00000287766 TFE3P19532 575 aaPredicted RBP12.9□□□□□ -0.34
SLC6A1-201ENST00000287766 MMP14P50281 582 aa12.9□□□□□ -0.34
SLC6A1-201ENST00000287766 MAP3K7CLP57077 242 aa12.9□□□□□ -0.34
SLC6A1-201ENST00000287766 TRMT5Q32P41 509 aaKnown RBP12.9□□□□□ -0.34
SLC6A1-201ENST00000287766 EFHC1Q5JVL4 640 aa12.9□□□□□ -0.34
SLC6A1-201ENST00000287766 TRAPPC9Q96Q05 1148 aa12.9□□□□□ -0.34
SLC6A1-201ENST00000287766 DDIT4Q9NX09 232 aa12.9□□□□□ -0.34
SLC6A1-201ENST00000287766 NFS1Q9Y697 457 aa12.9□□□□□ -0.34
SLC6A1-201ENST00000287766 E9PBE3 544 aa12.9□□□□□ -0.34
SLC6A1-201ENST00000287766 PLSCR1O15162 318 aa12.9□□□□□ -0.34
SLC6A1-201ENST00000287766 KLHL41O60662 606 aa12.9□□□□□ -0.34
SLC6A1-201ENST00000287766 FAM155BO75949 473 aa12.9□□□□□ -0.34
SLC6A1-201ENST00000287766 LYPLA2O95372 231 aa12.9□□□□□ -0.34
SLC6A1-201ENST00000287766 ASS1P00966 412 aaKnown RBP12.9□□□□□ -0.34
SLC6A1-201ENST00000287766 C4BPAP04003 597 aaKnown RBP12.9□□□□□ -0.34
SLC6A1-201ENST00000287766 POLBP06746 335 aa12.9□□□□□ -0.34
SLC6A1-201ENST00000287766 HADHAP40939 763 aa12.9□□□□□ -0.34
SLC6A1-201ENST00000287766 ANKRD22Q5VYY1 191 aa12.9□□□□□ -0.34
SLC6A1-201ENST00000287766 CRELD2Q6UXH1 353 aaPredicted RBP12.9□□□□□ -0.34
SLC6A1-201ENST00000287766 PHF13Q86YI8 300 aaPredicted RBP12.9□□□□□ -0.34
SLC6A1-201ENST00000287766 SIX5Q8N196 739 aa12.9□□□□□ -0.34
SLC6A1-201ENST00000287766 ZNF555Q8NEP9 628 aa12.9□□□□□ -0.34
SLC6A1-201ENST00000287766 DIS3LQ8TF46 1054 aaKnown RBP12.9□□□□□ -0.34
SLC6A1-201ENST00000287766 FAM136AQ96C01 138 aa12.9□□□□□ -0.34
SLC6A1-201ENST00000287766 GCNAQ96QF7 691 aa12.9□□□□□ -0.34
SLC6A1-201ENST00000287766 CPXM1Q96SM3 734 aa12.9□□□□□ -0.34
SLC6A1-201ENST00000287766 NOL6Q9H6R4 1146 aaKnown RBP12.9□□□□□ -0.34
SLC6A1-201ENST00000287766 SFMBT1Q9UHJ3 866 aa12.9□□□□□ -0.34
SLC6A1-201ENST00000287766 A0A0B4J269 797 aa12.9□□□□□ -0.34
SLC6A1-201ENST00000287766 WDR27A2RRH5 827 aa12.9□□□□□ -0.34
SLC6A1-201ENST00000287766 SYNDIG1LA6NDD5 238 aa12.9□□□□□ -0.34
SLC6A1-201ENST00000287766 PEX1O43933 1283 aa12.9□□□□□ -0.34
SLC6A1-201ENST00000287766 UNC5CO95185 931 aa12.9□□□□□ -0.34
SLC6A1-201ENST00000287766 CYP2C8P10632 490 aa12.9□□□□□ -0.34
SLC6A1-201ENST00000287766 KCNA2P16389 499 aa12.9□□□□□ -0.34
SLC6A1-201ENST00000287766 KCNT2Q6UVM3 1135 aa12.9□□□□□ -0.34
SLC6A1-201ENST00000287766 ABHD15Q6UXT9 468 aa12.9□□□□□ -0.34
SLC6A1-201ENST00000287766 MON1BQ7L1V2 547 aa12.9□□□□□ -0.34
SLC6A1-201ENST00000287766 PATL1Q86TB9 770 aaKnown RBP12.9□□□□□ -0.34
SLC6A1-201ENST00000287766 ECHDC2Q86YB7 292 aa12.9□□□□□ -0.34
SLC6A1-201ENST00000287766 KBTBD2Q8IY47 623 aa12.9□□□□□ -0.34
SLC6A1-201ENST00000287766 KIAA0319LQ8IZA0 1049 aa12.9□□□□□ -0.34
SLC6A1-201ENST00000287766 TTC39CQ8N584 583 aa12.9□□□□□ -0.34
SLC6A1-201ENST00000287766 GALNT8Q9NY28 637 aa12.9□□□□□ -0.34
SLC6A1-201ENST00000287766 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP12.9□□□□□ -0.34
SLC6A1-201ENST00000287766 DAPK2Q9UIK4 370 aa12.9□□□□□ -0.34
SLC6A1-201ENST00000287766 PACSIN3Q9UKS6 424 aa12.9□□□□□ -0.34
SLC6A1-201ENST00000287766 CORO1CQ9ULV4 474 aaPredicted RBP12.9□□□□□ -0.34
SLC6A1-201ENST00000287766 SYNPO2Q9UMS6 1093 aa12.9□□□□□ -0.34
SLC6A1-201ENST00000287766 H3BRB1 525 aa12.89□□□□□ -0.35
SLC6A1-201ENST00000287766 HNRNPRO43390 633 aaKnown RBP12.89□□□□□ -0.35
SLC6A1-201ENST00000287766 PMPCBO75439 489 aa12.89□□□□□ -0.35
SLC6A1-201ENST00000287766 FASTKD5Q7L8L6 764 aaKnown RBP12.89□□□□□ -0.35
SLC6A1-201ENST00000287766 OTOAQ7RTW8 1153 aa12.89□□□□□ -0.35
SLC6A1-201ENST00000287766 POLNQ7Z5Q5 900 aa12.89□□□□□ -0.35
SLC6A1-201ENST00000287766 REPS2Q8NFH8 660 aa12.89□□□□□ -0.35
SLC6A1-201ENST00000287766 TFAP2BQ92481 460 aa12.89□□□□□ -0.35
SLC6A1-201ENST00000287766 PAWRQ96IZ0 340 aaKnown RBP12.89□□□□□ -0.35
SLC6A1-201ENST00000287766 ASPSCR1Q9BZE9 553 aa12.89□□□□□ -0.35
SLC6A1-201ENST00000287766 TUT1Q9H6E5 874 aaKnown RBP12.89□□□□□ -0.35
SLC6A1-201ENST00000287766 SARS2Q9NP81 518 aaKnown RBP12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms