RNA–Protein interactions for RNA: ENST00000283131.3

SMARCA5-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCA5, Length 7,923 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA5-201ENST00000283131 PSIP1O75475 530 aaKnown RBP13.53□□□□□ -0.24
SMARCA5-201ENST00000283131 LDOC1O95751 146 aaPredicted RBP13.53□□□□□ -0.24
SMARCA5-201ENST00000283131 PTGES3Q15185 160 aaKnown RBP13.53□□□□□ -0.24
SMARCA5-201ENST00000283131 PRR5LQ6MZQ0 368 aa13.53□□□□□ -0.24
SMARCA5-201ENST00000283131 HIST2H2ABQ8IUE6 130 aaPredicted RBP13.53□□□□□ -0.24
SMARCA5-201ENST00000283131 CCNJLQ8IV13 435 aa13.53□□□□□ -0.24
SMARCA5-201ENST00000283131 HPDLQ96IR7 371 aa13.53□□□□□ -0.24
SMARCA5-201ENST00000283131 CATSPER2Q96P56 530 aa13.53□□□□□ -0.24
SMARCA5-201ENST00000283131 MYH10P35580 1976 aa13.53□□□□□ -0.24
SMARCA5-201ENST00000283131 AFF2P51816 1311 aa13.53□□□□□ -0.24
SMARCA5-201ENST00000283131 EPHB3P54753 998 aa13.53□□□□□ -0.24
SMARCA5-201ENST00000283131 XKR3Q5GH77 459 aa13.53□□□□□ -0.24
SMARCA5-201ENST00000283131 KLHL23Q8NBE8 558 aa13.53□□□□□ -0.24
SMARCA5-201ENST00000283131 RAD51BO15315 384 aa13.53□□□□□ -0.24
SMARCA5-201ENST00000283131 SLC16A3O15427 465 aaKnown RBP13.53□□□□□ -0.24
SMARCA5-201ENST00000283131 MYL4P12829 197 aa13.53□□□□□ -0.24
SMARCA5-201ENST00000283131 PRKAR2AP13861 404 aaKnown RBP13.53□□□□□ -0.24
SMARCA5-201ENST00000283131 HSF2Q03933 536 aa13.53□□□□□ -0.24
SMARCA5-201ENST00000283131 AGKQ53H12 422 aa13.53□□□□□ -0.24
SMARCA5-201ENST00000283131 RAB11FIP2Q7L804 512 aa13.53□□□□□ -0.24
SMARCA5-201ENST00000283131 HEY2Q9UBP5 337 aa13.53□□□□□ -0.24
SMARCA5-201ENST00000283131 LOC100506127A0A0U1RQW1 187 aa13.53□□□□□ -0.24
SMARCA5-201ENST00000283131 GARTP22102 1010 aa13.53□□□□□ -0.24
SMARCA5-201ENST00000283131 MYL9P24844 172 aa13.53□□□□□ -0.24
SMARCA5-201ENST00000283131 SLC29A2Q14542 456 aa13.53□□□□□ -0.24
SMARCA5-201ENST00000283131 NEDD8Q15843 81 aa13.53□□□□□ -0.24
SMARCA5-201ENST00000283131 LRRC17Q8N6Y2 441 aa13.53□□□□□ -0.24
SMARCA5-201ENST00000283131 RP9Q8TA86 221 aaKnown RBP13.53□□□□□ -0.24
SMARCA5-201ENST00000283131 EPB41L4AQ9HCS5 686 aaPredicted RBP13.53□□□□□ -0.24
SMARCA5-201ENST00000283131 PCF11O94913 1555 aaKnown RBP13.53□□□□□ -0.24
SMARCA5-201ENST00000283131 ZNF335Q9H4Z2 1342 aaPredicted RBP13.53□□□□□ -0.24
SMARCA5-201ENST00000283131 M0QYT0 321 aa13.53□□□□□ -0.24
SMARCA5-201ENST00000283131 CENPCQ03188 943 aa13.53□□□□□ -0.24
SMARCA5-201ENST00000283131 DNAJC3Q13217 504 aa13.53□□□□□ -0.24
SMARCA5-201ENST00000283131 ADGRF4Q8IZF3 695 aa13.53□□□□□ -0.24
SMARCA5-201ENST00000283131 TMEM143Q96AN5 459 aa13.53□□□□□ -0.24
SMARCA5-201ENST00000283131 AP1S3Q96PC3 154 aa13.53□□□□□ -0.24
SMARCA5-201ENST00000283131 INPP4BO15327 924 aa13.53□□□□□ -0.24
SMARCA5-201ENST00000283131 CCNT2O60583 730 aaKnown RBP13.53□□□□□ -0.24
SMARCA5-201ENST00000283131 TLX1P31314 330 aaPredicted RBP13.53□□□□□ -0.24
SMARCA5-201ENST00000283131 FAUP35544 74 aaKnown RBP13.53□□□□□ -0.24
SMARCA5-201ENST00000283131 SRSF11Q05519 484 aaKnown RBP13.53□□□□□ -0.24
SMARCA5-201ENST00000283131 PTPAQ15257 358 aa13.53□□□□□ -0.24
SMARCA5-201ENST00000283131 ZNF589Q86UQ0 364 aaPredicted RBP13.53□□□□□ -0.24
SMARCA5-201ENST00000283131 TDRD5Q8NAT2 981 aaKnown RBP13.53□□□□□ -0.24
SMARCA5-201ENST00000283131 UBA3Q8TBC4 463 aa13.53□□□□□ -0.24
SMARCA5-201ENST00000283131 FAM111AQ96PZ2 611 aa13.53□□□□□ -0.24
SMARCA5-201ENST00000283131 PUS7LQ9H0K6 701 aaKnown RBP13.53□□□□□ -0.24
SMARCA5-201ENST00000283131 SOHLH2Q9NX45 425 aa13.53□□□□□ -0.24
SMARCA5-201ENST00000283131 LIMD1Q9UGP4 676 aa13.53□□□□□ -0.24
SMARCA5-201ENST00000283131 MCIDASD6RGH6 385 aa13.52□□□□□ -0.24
SMARCA5-201ENST00000283131 G3V2T6 193 aa13.52□□□□□ -0.24
SMARCA5-201ENST00000283131 IFNA16P05015 189 aa13.52□□□□□ -0.24
SMARCA5-201ENST00000283131 RPL9P32969 192 aaKnown RBP13.52□□□□□ -0.24
SMARCA5-201ENST00000283131 GLRBP48167 497 aa13.52□□□□□ -0.24
SMARCA5-201ENST00000283131 MYBPC3Q14896 1274 aa13.52□□□□□ -0.24
SMARCA5-201ENST00000283131 USP41Q3LFD5 358 aa13.52□□□□□ -0.24
SMARCA5-201ENST00000283131 ATF7IP2Q5U623 682 aa13.52□□□□□ -0.24
SMARCA5-201ENST00000283131 CXXC5Q7LFL8 322 aaKnown RBP13.52□□□□□ -0.24
SMARCA5-201ENST00000283131 LRRC6Q86X45 466 aa13.52□□□□□ -0.24
SMARCA5-201ENST00000283131 RGL4Q8IZJ4 473 aa13.52□□□□□ -0.24
SMARCA5-201ENST00000283131 GMCL1Q96IK5 515 aa13.52□□□□□ -0.24
SMARCA5-201ENST00000283131 NAT9Q9BTE0 207 aa13.52□□□□□ -0.24
SMARCA5-201ENST00000283131 LRRC1Q9BTT6 524 aa13.52□□□□□ -0.24
SMARCA5-201ENST00000283131 ATPIF1Q9UII2 106 aa13.52□□□□□ -0.24
SMARCA5-201ENST00000283131 PRR12Q9ULL5 1215 aa13.52□□□□□ -0.24
SMARCA5-201ENST00000283131 SNX12Q9UMY4 172 aa13.52□□□□□ -0.24
SMARCA5-201ENST00000283131 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.52□□□□□ -0.24
SMARCA5-201ENST00000283131 TTC26A0AVF1 554 aa13.52□□□□□ -0.24
SMARCA5-201ENST00000283131 RGS14O43566 566 aa13.52□□□□□ -0.24
SMARCA5-201ENST00000283131 EYA4O95677 639 aa13.52□□□□□ -0.24
SMARCA5-201ENST00000283131 URODP06132 367 aa13.52□□□□□ -0.24
SMARCA5-201ENST00000283131 TBC1D25Q3MII6 688 aa13.52□□□□□ -0.24
SMARCA5-201ENST00000283131 ZNF512BQ96KM6 892 aaPredicted RBP13.52□□□□□ -0.24
SMARCA5-201ENST00000283131 TEKT5Q96M29 485 aa13.52□□□□□ -0.24
SMARCA5-201ENST00000283131 CDK5RAP1Q96SZ6 601 aaKnown RBP13.52□□□□□ -0.24
SMARCA5-201ENST00000283131 CBFA2T3O75081 653 aa13.52□□□□□ -0.25
SMARCA5-201ENST00000283131 ENDOD1O94919 500 aa13.52□□□□□ -0.25
SMARCA5-201ENST00000283131 FAM58BPP0C7Q3 252 aa13.52□□□□□ -0.25
SMARCA5-201ENST00000283131 CYP2C8P10632 490 aa13.52□□□□□ -0.25
SMARCA5-201ENST00000283131 NFKB1P19838 968 aa13.52□□□□□ -0.25
SMARCA5-201ENST00000283131 SKIV2L2P42285 1042 aaKnown RBP13.52□□□□□ -0.25
SMARCA5-201ENST00000283131 MCCC1Q96RQ3 725 aaPredicted RBP13.52□□□□□ -0.25
SMARCA5-201ENST00000283131 CLEC4AQ9UMR7 237 aa13.52□□□□□ -0.25
SMARCA5-201ENST00000283131 GSAPA4D1B5 854 aa13.52□□□□□ -0.25
SMARCA5-201ENST00000283131 SDR42E2A6NKP2 422 aa13.52□□□□□ -0.25
SMARCA5-201ENST00000283131 ERI2A8K979 691 aaKnown RBP13.52□□□□□ -0.25
SMARCA5-201ENST00000283131 ITGA8P53708 1063 aa13.52□□□□□ -0.25
SMARCA5-201ENST00000283131 SLC38A2Q96QD8 506 aa13.52□□□□□ -0.25
SMARCA5-201ENST00000283131 PARK7Q99497 189 aaKnown RBP13.52□□□□□ -0.25
SMARCA5-201ENST00000283131 BPIFA3Q9BQP9 254 aa13.52□□□□□ -0.25
SMARCA5-201ENST00000283131 SERPINA1P01009 418 aa13.52□□□□□ -0.25
SMARCA5-201ENST00000283131 VBP1P61758 197 aa13.52□□□□□ -0.25
SMARCA5-201ENST00000283131 EPHA7Q15375 998 aa13.52□□□□□ -0.25
SMARCA5-201ENST00000283131 SNRNP35Q16560 246 aaKnown RBP13.52□□□□□ -0.25
SMARCA5-201ENST00000283131 PYDC2Q56P42 97 aa13.52□□□□□ -0.25
SMARCA5-201ENST00000283131 CRNNQ9UBG3 495 aaPredicted RBP13.52□□□□□ -0.25
SMARCA5-201ENST00000283131 RPL4P36578 427 aaKnown RBP13.52□□□□□ -0.25
SMARCA5-201ENST00000283131 RHOAP61586 193 aa13.52□□□□□ -0.25
SMARCA5-201ENST00000283131 MTM1Q13496 603 aa13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms