RNA–Protein interactions for RNA: ENST00000282516.12

NIPBL-201, Transcript of NIPBL, cohesin loading factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NIPBL, Length 10,435 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-201ENST00000282516 INO80DQ53TQ3 878 aaPredicted RBP8.94□□□□□ -0.98
NIPBL-201ENST00000282516 CCNI2Q6ZMN8 369 aaPredicted RBP8.94□□□□□ -0.98
NIPBL-201ENST00000282516 METTL5Q9NRN9 209 aaKnown RBP8.94□□□□□ -0.98
NIPBL-201ENST00000282516 ABI2Q9NYB9 513 aaPredicted RBP8.94□□□□□ -0.98
NIPBL-201ENST00000282516 PPIEQ9UNP9 301 aaKnown RBP8.94□□□□□ -0.98
NIPBL-201ENST00000282516 RUVBL2Q9Y230 463 aaKnown RBP8.94□□□□□ -0.98
NIPBL-201ENST00000282516 CCDC154A6NI56 674 aa8.94□□□□□ -0.98
NIPBL-201ENST00000282516 NCAM2O15394 837 aa8.94□□□□□ -0.98
NIPBL-201ENST00000282516 SRGNP10124 158 aa8.94□□□□□ -0.98
NIPBL-201ENST00000282516 TFDP3Q5H9I0 405 aa8.94□□□□□ -0.98
NIPBL-201ENST00000282516 LRRC17Q8N6Y2 441 aa8.94□□□□□ -0.98
NIPBL-201ENST00000282516 PIH1D3Q9NQM4 214 aaKnown RBP8.94□□□□□ -0.98
NIPBL-201ENST00000282516 PRMT7Q9NVM4 692 aaPredicted RBP8.94□□□□□ -0.98
NIPBL-201ENST00000282516 CBFA2T3O75081 653 aa8.94□□□□□ -0.98
NIPBL-201ENST00000282516 PARNO95453 639 aaKnown RBP8.94□□□□□ -0.98
NIPBL-201ENST00000282516 PTPN4P29074 926 aa8.94□□□□□ -0.98
NIPBL-201ENST00000282516 GPR15P49685 360 aa8.94□□□□□ -0.98
NIPBL-201ENST00000282516 AKR1D1P51857 326 aa8.94□□□□□ -0.98
NIPBL-201ENST00000282516 AMPD2Q01433 879 aa8.94□□□□□ -0.98
NIPBL-201ENST00000282516 CXXC5Q7LFL8 322 aaKnown RBP8.94□□□□□ -0.98
NIPBL-201ENST00000282516 OXER1Q8TDS5 423 aa8.94□□□□□ -0.98
NIPBL-201ENST00000282516 NSMCE2Q96MF7 247 aa8.94□□□□□ -0.98
NIPBL-201ENST00000282516 C7orf25Q9BPX7 421 aa8.94□□□□□ -0.98
NIPBL-201ENST00000282516 RXFP1Q9HBX9 757 aa8.94□□□□□ -0.98
NIPBL-201ENST00000282516 ZNF222Q9UK12 451 aa8.94□□□□□ -0.98
NIPBL-201ENST00000282516 GH1P01241 217 aa8.94□□□□□ -0.98
NIPBL-201ENST00000282516 RIPOR1Q6ZS17 1223 aa8.94□□□□□ -0.98
NIPBL-201ENST00000282516 IL17REQ8NFR9 667 aa8.94□□□□□ -0.98
NIPBL-201ENST00000282516 FEZF2Q8TBJ5 459 aa8.94□□□□□ -0.98
NIPBL-201ENST00000282516 AKAP7Q9P0M2 348 aaPredicted RBP8.94□□□□□ -0.98
NIPBL-201ENST00000282516 RSL24D1Q9UHA3 163 aaKnown RBP8.94□□□□□ -0.98
NIPBL-201ENST00000282516 LYVE1Q9Y5Y7 322 aa8.94□□□□□ -0.98
NIPBL-201ENST00000282516 QRICH2Q9H0J4 1663 aa8.94□□□□□ -0.98
NIPBL-201ENST00000282516 ADAMTS12P58397 1594 aa8.94□□□□□ -0.98
NIPBL-201ENST00000282516 MTA2O94776 668 aa8.94□□□□□ -0.98
NIPBL-201ENST00000282516 MPOP05164 745 aa8.94□□□□□ -0.98
NIPBL-201ENST00000282516 LYNP07948 512 aa8.94□□□□□ -0.98
NIPBL-201ENST00000282516 TMEM253P0C7T8 217 aa8.94□□□□□ -0.98
NIPBL-201ENST00000282516 ALDH7A1P49419 539 aaKnown RBP8.94□□□□□ -0.98
NIPBL-201ENST00000282516 IRAK1P51617 712 aa8.94□□□□□ -0.98
NIPBL-201ENST00000282516 PRKAA2P54646 552 aa8.94□□□□□ -0.98
NIPBL-201ENST00000282516 XRCC4Q13426 336 aa8.94□□□□□ -0.98
NIPBL-201ENST00000282516 RGS21Q2M5E4 152 aa8.94□□□□□ -0.98
NIPBL-201ENST00000282516 DNAJC1Q96KC8 554 aaKnown RBP8.94□□□□□ -0.98
NIPBL-201ENST00000282516 GPRC5DQ9NZD1 345 aa8.94□□□□□ -0.98
NIPBL-201ENST00000282516 HAO1Q9UJM8 370 aa8.94□□□□□ -0.98
NIPBL-201ENST00000282516 AFF2P51816 1311 aa8.94□□□□□ -0.98
NIPBL-201ENST00000282516 EFCAB6Q5THR3 1501 aa8.94□□□□□ -0.98
NIPBL-201ENST00000282516 HALP42357 657 aa8.94□□□□□ -0.98
NIPBL-201ENST00000282516 BST2Q10589 180 aaKnown RBP8.94□□□□□ -0.98
NIPBL-201ENST00000282516 MAPK7Q13164 816 aa8.94□□□□□ -0.98
NIPBL-201ENST00000282516 TSHZ1Q6ZSZ6 1077 aa8.94□□□□□ -0.98
NIPBL-201ENST00000282516 ELOA2Q8IYF1 753 aaPredicted RBP8.94□□□□□ -0.98
NIPBL-201ENST00000282516 LPAR1Q92633 364 aa8.94□□□□□ -0.98
NIPBL-201ENST00000282516 SLC38A2Q96QD8 506 aa8.94□□□□□ -0.98
NIPBL-201ENST00000282516 DCUN1D5Q9BTE7 237 aa8.94□□□□□ -0.98
NIPBL-201ENST00000282516 REEP1Q9H902 201 aa8.94□□□□□ -0.98
NIPBL-201ENST00000282516 MCUBQ9NWR8 336 aa8.94□□□□□ -0.98
NIPBL-201ENST00000282516 VPS28Q9UK41 221 aa8.94□□□□□ -0.98
NIPBL-201ENST00000282516 INPP4BO15327 924 aa8.94□□□□□ -0.98
NIPBL-201ENST00000282516 RAG1P15918 1043 aa8.94□□□□□ -0.98
NIPBL-201ENST00000282516 BTN3A2P78410 334 aa8.94□□□□□ -0.98
NIPBL-201ENST00000282516 STARD3Q14849 445 aa8.94□□□□□ -0.98
NIPBL-201ENST00000282516 EIF2S3LQ2VIR3 472 aaKnown RBP8.94□□□□□ -0.98
NIPBL-201ENST00000282516 MTDHQ86UE4 582 aaKnown RBP8.94□□□□□ -0.98
NIPBL-201ENST00000282516 CBWD2Q8IUF1 395 aa8.94□□□□□ -0.98
NIPBL-201ENST00000282516 SMYD1Q8NB12 490 aa8.94□□□□□ -0.98
NIPBL-201ENST00000282516 METP08581 1390 aa8.94□□□□□ -0.98
NIPBL-201ENST00000282516 TEX46H3BTG2 121 aa8.94□□□□□ -0.98
NIPBL-201ENST00000282516 EPN2O95208 641 aa8.94□□□□□ -0.98
NIPBL-201ENST00000282516 HLA-DRAP01903 254 aa8.94□□□□□ -0.98
NIPBL-201ENST00000282516 TTKP33981 857 aa8.94□□□□□ -0.98
NIPBL-201ENST00000282516 CAPGP40121 348 aa8.94□□□□□ -0.98
NIPBL-201ENST00000282516 SKIV2L2P42285 1042 aaKnown RBP8.94□□□□□ -0.98
NIPBL-201ENST00000282516 PROSER3Q2NL68 480 aa8.94□□□□□ -0.98
NIPBL-201ENST00000282516 RNF44Q7L0R7 432 aa8.94□□□□□ -0.98
NIPBL-201ENST00000282516 SAMD3Q8N6K7 520 aa8.94□□□□□ -0.98
NIPBL-201ENST00000282516 POP5Q969H6 163 aaKnown RBP8.94□□□□□ -0.98
NIPBL-201ENST00000282516 TMEM143Q96AN5 459 aa8.94□□□□□ -0.98
NIPBL-201ENST00000282516 ZSWIM1Q9BR11 485 aa8.94□□□□□ -0.98
NIPBL-201ENST00000282516 PABPC3Q9H361 631 aaKnown RBP8.94□□□□□ -0.98
NIPBL-201ENST00000282516 CHST12Q9NRB3 414 aa8.94□□□□□ -0.98
NIPBL-201ENST00000282516 TMEM260Q9NX78 707 aa8.94□□□□□ -0.98
NIPBL-201ENST00000282516 CCDC59Q9P031 241 aaKnown RBP8.94□□□□□ -0.98
NIPBL-201ENST00000282516 SAMD9Q5K651 1589 aa8.94□□□□□ -0.98
NIPBL-201ENST00000282516 TTLL13PA6NNM8 815 aa8.93□□□□□ -0.98
NIPBL-201ENST00000282516 FAM25EA8MYX2 175 aa8.93□□□□□ -0.98
NIPBL-201ENST00000282516 EPHA7Q15375 998 aa8.93□□□□□ -0.98
NIPBL-201ENST00000282516 ACTRT2Q8TDY3 377 aa8.93□□□□□ -0.98
NIPBL-201ENST00000282516 TEX13BQ9BXU2 312 aa8.93□□□□□ -0.98
NIPBL-201ENST00000282516 FBXO28Q9NVF7 368 aa8.93□□□□□ -0.98
NIPBL-201ENST00000282516 TBC1D13Q9NVG8 400 aa8.93□□□□□ -0.98
NIPBL-201ENST00000282516 CKLFQ9UBR5 152 aa8.93□□□□□ -0.98
NIPBL-201ENST00000282516 CES2O00748 559 aa8.93□□□□□ -0.98
NIPBL-201ENST00000282516 MYL4P12829 197 aa8.93□□□□□ -0.98
NIPBL-201ENST00000282516 GSSP48637 474 aa8.93□□□□□ -0.98
NIPBL-201ENST00000282516 RPS6KA3P51812 740 aa8.93□□□□□ -0.98
NIPBL-201ENST00000282516 PREPLQ4J6C6 727 aaPredicted RBP8.93□□□□□ -0.98
NIPBL-201ENST00000282516 ADHFE1Q8IWW8 467 aa8.93□□□□□ -0.98
NIPBL-201ENST00000282516 TSPAN14Q8NG11 270 aa8.93□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms