RNA–Protein interactions for RNA: ENST00000278385.10

CD44-202, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 697 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-202ENST00000278385 SUN2Q9UH99 717 aa4.91□□□□□ -1.62
CD44-202ENST00000278385 CHORDC1Q9UHD1 332 aaPredicted RBP4.91□□□□□ -1.62
CD44-202ENST00000278385 EDARQ9UNE0 448 aa4.91□□□□□ -1.62
CD44-202ENST00000278385 MAN2B2Q9Y2E5 1009 aa4.91□□□□□ -1.62
CD44-202ENST00000278385 ZBTB1Q9Y2K1 713 aa4.91□□□□□ -1.62
CD44-202ENST00000278385 ANGPTL3Q9Y5C1 460 aa4.91□□□□□ -1.62
CD44-202ENST00000278385 CYP46A1Q9Y6A2 500 aa4.91□□□□□ -1.62
CD44-202ENST00000278385 COL3A1P02461 1466 aaPredicted RBP4.91□□□□□ -1.62
CD44-202ENST00000278385 HEG1Q9ULI3 1381 aa4.91□□□□□ -1.62
CD44-202ENST00000278385 C4BP0C0L5 1744 aa4.9□□□□□ -1.62
CD44-202ENST00000278385 A0A0B4J203 849 aa4.9□□□□□ -1.63
CD44-202ENST00000278385 FAM234BA2RU67 622 aa4.9□□□□□ -1.63
CD44-202ENST00000278385 POLRMTO00411 1230 aaKnown RBP4.9□□□□□ -1.63
CD44-202ENST00000278385 SH2B2O14492 632 aaPredicted RBP4.9□□□□□ -1.63
CD44-202ENST00000278385 CASQ2O14958 399 aaPredicted RBP4.9□□□□□ -1.63
CD44-202ENST00000278385 ZBTB43O43298 467 aa4.9□□□□□ -1.63
CD44-202ENST00000278385 SGTAO43765 313 aa4.9□□□□□ -1.63
CD44-202ENST00000278385 KLHL41O60662 606 aa4.9□□□□□ -1.63
CD44-202ENST00000278385 TBX10O75333 385 aa4.9□□□□□ -1.63
CD44-202ENST00000278385 SEC22BO75396 215 aa4.9□□□□□ -1.63
CD44-202ENST00000278385 STAM2O75886 525 aa4.9□□□□□ -1.63
CD44-202ENST00000278385 KIAA0754O94854 1291 aa4.9□□□□□ -1.63
CD44-202ENST00000278385 FTLP02792 175 aaPredicted RBP4.9□□□□□ -1.63
CD44-202ENST00000278385 SNRNP70P08621 437 aaKnown RBP4.9□□□□□ -1.63
CD44-202ENST00000278385 BRAFP15056 766 aa4.9□□□□□ -1.63
CD44-202ENST00000278385 HOXA5P20719 270 aa4.9□□□□□ -1.63
CD44-202ENST00000278385 APEX1P27695 318 aaKnown RBP4.9□□□□□ -1.63
CD44-202ENST00000278385 KRT2P35908 639 aa4.9□□□□□ -1.63
CD44-202ENST00000278385 DPP6P42658 865 aa4.9□□□□□ -1.63
CD44-202ENST00000278385 MEOX1P50221 254 aa4.9□□□□□ -1.63
CD44-202ENST00000278385 RAD23AP54725 363 aa4.9□□□□□ -1.63
CD44-202ENST00000278385 BCAR1P56945 870 aa4.9□□□□□ -1.63
CD44-202ENST00000278385 DLX2Q07687 328 aaPredicted RBP4.9□□□□□ -1.63
CD44-202ENST00000278385 DMTNQ08495 405 aa4.9□□□□□ -1.63
CD44-202ENST00000278385 EPS8Q12929 822 aa4.9□□□□□ -1.63
CD44-202ENST00000278385 STK4Q13043 487 aa4.9□□□□□ -1.63
CD44-202ENST00000278385 MAMLD1Q13495 774 aa4.9□□□□□ -1.63
CD44-202ENST00000278385 PRPF4BQ13523 1007 aaKnown RBP4.9□□□□□ -1.63
CD44-202ENST00000278385 PUM1Q14671 1186 aaKnown RBP eCLIP4.9□□□□□ -1.63
CD44-202ENST00000278385 RABEP1Q15276 862 aa4.9□□□□□ -1.63
CD44-202ENST00000278385 SEC23AQ15436 765 aa4.9□□□□□ -1.63
CD44-202ENST00000278385 RAB30Q15771 203 aa4.9□□□□□ -1.63
CD44-202ENST00000278385 KYNUQ16719 465 aa4.9□□□□□ -1.63
CD44-202ENST00000278385 DUSP28Q4G0W2 176 aa4.9□□□□□ -1.63
CD44-202ENST00000278385 PHF19Q5T6S3 580 aa4.9□□□□□ -1.63
CD44-202ENST00000278385 SHQ1Q6PI26 577 aaKnown RBP4.9□□□□□ -1.63
CD44-202ENST00000278385 SLC22A25Q6T423 547 aa4.9□□□□□ -1.63
CD44-202ENST00000278385 FIP1L1Q6UN15 594 aaKnown RBP4.9□□□□□ -1.63
CD44-202ENST00000278385 ARHGEF18Q6ZSZ5 1173 aa4.9□□□□□ -1.63
CD44-202ENST00000278385 TTLL10Q6ZVT0 673 aa4.9□□□□□ -1.63
CD44-202ENST00000278385 SZRD1Q7Z422 152 aa4.9□□□□□ -1.63
CD44-202ENST00000278385 ZNF804AQ7Z570 1209 aa4.9□□□□□ -1.63
CD44-202ENST00000278385 RAB11FIP4Q86YS3 637 aa4.9□□□□□ -1.63
CD44-202ENST00000278385 REXO1L1PQ8IX06 675 aa4.9□□□□□ -1.63
CD44-202ENST00000278385 THNSL1Q8IYQ7 743 aa4.9□□□□□ -1.63
CD44-202ENST00000278385 Q8NFD4 153 aa4.9□□□□□ -1.63
CD44-202ENST00000278385 IL17RDQ8NFM7 739 aa4.9□□□□□ -1.63
CD44-202ENST00000278385 SH3RF3Q8TEJ3 882 aaPredicted RBP4.9□□□□□ -1.63
CD44-202ENST00000278385 AFG1LQ8WV93 481 aa4.9□□□□□ -1.63
CD44-202ENST00000278385 ASB15Q8WXK1 588 aa4.9□□□□□ -1.63
CD44-202ENST00000278385 DLG3Q92796 817 aa4.9□□□□□ -1.63
CD44-202ENST00000278385 RGMAQ96B86 450 aa4.9□□□□□ -1.63
CD44-202ENST00000278385 FAM120BQ96EK7 910 aaKnown RBP4.9□□□□□ -1.63
CD44-202ENST00000278385 ZNF764Q96H86 408 aaPredicted RBP4.9□□□□□ -1.63
CD44-202ENST00000278385 TWNKQ96RR1 684 aa4.9□□□□□ -1.63
CD44-202ENST00000278385 EIF2AQ9BY44 585 aaKnown RBP4.9□□□□□ -1.63
CD44-202ENST00000278385 TRIM5Q9C035 493 aa4.9□□□□□ -1.63
CD44-202ENST00000278385 RNPEPQ9H4A4 650 aa4.9□□□□□ -1.63
CD44-202ENST00000278385 RPAP3Q9H6T3 665 aaPredicted RBP4.9□□□□□ -1.63
CD44-202ENST00000278385 MLXIPQ9HAP2 919 aa4.9□□□□□ -1.63
CD44-202ENST00000278385 TMEM8AQ9HCN3 771 aa4.9□□□□□ -1.63
CD44-202ENST00000278385 ERVK-5Q9HDB9 667 aa4.9□□□□□ -1.63
CD44-202ENST00000278385 PAPOLBQ9NRJ5 636 aaKnown RBP4.9□□□□□ -1.63
CD44-202ENST00000278385 SEPT11Q9NVA2 429 aaKnown RBP4.9□□□□□ -1.63
CD44-202ENST00000278385 ZNF624Q9P2J8 865 aaPredicted RBP4.9□□□□□ -1.63
CD44-202ENST00000278385 HECAQ9UBI9 543 aaPredicted RBP4.9□□□□□ -1.63
CD44-202ENST00000278385 TBX20Q9UMR3 447 aa4.9□□□□□ -1.63
CD44-202ENST00000278385 SCAF8Q9UPN6 1271 aaKnown RBP4.9□□□□□ -1.63
CD44-202ENST00000278385 USP15Q9Y4E8 981 aaPredicted RBP4.9□□□□□ -1.63
CD44-202ENST00000278385 MAPK8IP3Q9UPT6 1336 aa4.9□□□□□ -1.63
CD44-202ENST00000278385 QSER1Q2KHR3 1735 aa4.89□□□□□ -1.63
CD44-202ENST00000278385 TOGARAM1Q9Y4F4 1720 aa4.89□□□□□ -1.63
CD44-202ENST00000278385 MRC1P22897 1456 aa4.89□□□□□ -1.63
CD44-202ENST00000278385 A0A0G2JLW4 131 aa4.89□□□□□ -1.63
CD44-202ENST00000278385 UBA6A0AVT1 1052 aaPredicted RBP4.89□□□□□ -1.63
CD44-202ENST00000278385 PODXLO00592 558 aa4.89□□□□□ -1.63
CD44-202ENST00000278385 KIAA0355O15063 1070 aa4.89□□□□□ -1.63
CD44-202ENST00000278385 SLC16A6O15403 523 aa4.89□□□□□ -1.63
CD44-202ENST00000278385 ASAP2O43150 1006 aa4.89□□□□□ -1.63
CD44-202ENST00000278385 KCNQ3O43525 872 aa4.89□□□□□ -1.63
CD44-202ENST00000278385 NOBOXO60393 691 aa4.89□□□□□ -1.63
CD44-202ENST00000278385 SYNCRIPO60506 623 aaKnown RBP4.89□□□□□ -1.63
CD44-202ENST00000278385 PIAS2O75928 621 aa4.89□□□□□ -1.63
CD44-202ENST00000278385 SERPINB2P05120 415 aa4.89□□□□□ -1.63
CD44-202ENST00000278385 CYP2A6P11509 494 aaPredicted RBP4.89□□□□□ -1.63
CD44-202ENST00000278385 LAMP2P13473 410 aa4.89□□□□□ -1.63
CD44-202ENST00000278385 DPEP1P16444 411 aa4.89□□□□□ -1.63
CD44-202ENST00000278385 SYN1P17600 705 aa4.89□□□□□ -1.63
CD44-202ENST00000278385 TBXAS1P24557 533 aaPredicted RBP4.89□□□□□ -1.63
CD44-202ENST00000278385 HOXD10P28358 340 aa4.89□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms