RNA–Protein interactions for RNA: ENST00000276585.8

MRPS28-201, Transcript of mitochondrial ribosomal protein S28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MRPS28, Length 850 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS28-201ENST00000276585 SMAD1Q15797 465 aaKnown RBP12.98□□□□□ -0.33
MRPS28-201ENST00000276585 EML3Q32P44 896 aa12.98□□□□□ -0.33
MRPS28-201ENST00000276585 C6orf118Q5T5N4 469 aa12.98□□□□□ -0.33
MRPS28-201ENST00000276585 KRT39Q6A163 491 aa12.98□□□□□ -0.33
MRPS28-201ENST00000276585 ISM2Q6H9L7 571 aa12.98□□□□□ -0.33
MRPS28-201ENST00000276585 TTI2Q6NXR4 508 aa12.98□□□□□ -0.33
MRPS28-201ENST00000276585 PRICKLE2Q7Z3G6 844 aa12.98□□□□□ -0.33
MRPS28-201ENST00000276585 IL17RCQ8NAC3 791 aa12.98□□□□□ -0.33
MRPS28-201ENST00000276585 SCAMP5Q8TAC9 235 aa12.98□□□□□ -0.33
MRPS28-201ENST00000276585 BAHD1Q8TBE0 780 aaPredicted RBP12.98□□□□□ -0.33
MRPS28-201ENST00000276585 SLC2A14Q8TDB8 520 aa12.98□□□□□ -0.33
MRPS28-201ENST00000276585 SLC35C1Q96A29 364 aa12.98□□□□□ -0.33
MRPS28-201ENST00000276585 SMARCD1Q96GM5 515 aa12.98□□□□□ -0.33
MRPS28-201ENST00000276585 TNIP3Q96KP6 325 aa12.98□□□□□ -0.33
MRPS28-201ENST00000276585 RNF38Q9H0F5 515 aa12.98□□□□□ -0.33
MRPS28-201ENST00000276585 CSNK1G1Q9HCP0 422 aa12.98□□□□□ -0.33
MRPS28-201ENST00000276585 DMAP1Q9NPF5 467 aaPredicted RBP12.98□□□□□ -0.33
MRPS28-201ENST00000276585 FAM49BQ9NUQ9 324 aa12.98□□□□□ -0.33
MRPS28-201ENST00000276585 ARHGAP26Q9UNA1 814 aa12.98□□□□□ -0.33
MRPS28-201ENST00000276585 COQ4Q9Y3A0 265 aa12.98□□□□□ -0.33
MRPS28-201ENST00000276585 MYO18AQ92614 2054 aaKnown RBP12.98□□□□□ -0.33
MRPS28-201ENST00000276585 SPTAN1Q13813 2472 aaKnown RBP12.98□□□□□ -0.33
MRPS28-201ENST00000276585 HHLA1C9JL84 531 aa12.97□□□□□ -0.33
MRPS28-201ENST00000276585 AP1G2O75843 785 aa12.97□□□□□ -0.33
MRPS28-201ENST00000276585 CLSTN1O94985 981 aa12.97□□□□□ -0.33
MRPS28-201ENST00000276585 USP17L7P0C7H9 530 aa12.97□□□□□ -0.33
MRPS28-201ENST00000276585 ZDHHC11BP0C7U3 371 aa12.97□□□□□ -0.33
MRPS28-201ENST00000276585 P4HA1P13674 534 aa12.97□□□□□ -0.33
MRPS28-201ENST00000276585 OPRD1P41143 372 aa12.97□□□□□ -0.33
MRPS28-201ENST00000276585 SLC5A3P53794 718 aa12.97□□□□□ -0.33
MRPS28-201ENST00000276585 SLC7A9P82251 487 aa12.97□□□□□ -0.33
MRPS28-201ENST00000276585 FKBP3Q00688 224 aaKnown RBP12.97□□□□□ -0.33
MRPS28-201ENST00000276585 RHDQ02161 417 aa12.97□□□□□ -0.33
MRPS28-201ENST00000276585 LY6DQ14210 128 aa12.97□□□□□ -0.33
MRPS28-201ENST00000276585 HSF5Q4G112 596 aaPredicted RBP12.97□□□□□ -0.33
MRPS28-201ENST00000276585 SYCP2LQ5T4T6 812 aa12.97□□□□□ -0.33
MRPS28-201ENST00000276585 DHRS13Q6UX07 377 aa12.97□□□□□ -0.33
MRPS28-201ENST00000276585 GPRIN1Q7Z2K8 1008 aa12.97□□□□□ -0.33
MRPS28-201ENST00000276585 NUP93Q8N1F7 819 aa12.97□□□□□ -0.33
MRPS28-201ENST00000276585 SH3RF2Q8TEC5 729 aa12.97□□□□□ -0.33
MRPS28-201ENST00000276585 ZFRQ96KR1 1074 aaKnown RBP12.97□□□□□ -0.33
MRPS28-201ENST00000276585 GAREM1Q9H706 876 aa12.97□□□□□ -0.33
MRPS28-201ENST00000276585 CYP3A43Q9HB55 503 aa12.97□□□□□ -0.33
MRPS28-201ENST00000276585 IL21RQ9HBE5 538 aa12.97□□□□□ -0.33
MRPS28-201ENST00000276585 ZDHHC4Q9NPG8 344 aa12.97□□□□□ -0.33
MRPS28-201ENST00000276585 TM7SF3Q9NS93 570 aa12.97□□□□□ -0.33
MRPS28-201ENST00000276585 TRPM5Q9NZQ8 1165 aa12.97□□□□□ -0.33
MRPS28-201ENST00000276585 CEP192Q8TEP8 1941 aa12.97□□□□□ -0.33
MRPS28-201ENST00000276585 PLXND1Q9Y4D7 1925 aa12.97□□□□□ -0.33
MRPS28-201ENST00000276585 ATP8B3O60423 1300 aa12.96□□□□□ -0.33
MRPS28-201ENST00000276585 FLRT2O43155 660 aa12.96□□□□□ -0.33
MRPS28-201ENST00000276585 NFATC1O95644 943 aa12.96□□□□□ -0.33
MRPS28-201ENST00000276585 CER1O95813 267 aa12.96□□□□□ -0.33
MRPS28-201ENST00000276585 PFKLP17858 780 aa12.96□□□□□ -0.33
MRPS28-201ENST00000276585 HDCP19113 662 aa12.96□□□□□ -0.33
MRPS28-201ENST00000276585 CD58P19256 250 aa12.96□□□□□ -0.33
MRPS28-201ENST00000276585 CCDC173Q0VFZ6 552 aa12.96□□□□□ -0.33
MRPS28-201ENST00000276585 IFRD2Q12894 506 aaPredicted RBP12.96□□□□□ -0.33
MRPS28-201ENST00000276585 GAB4Q2WGN9 574 aa12.96□□□□□ -0.33
MRPS28-201ENST00000276585 CLEC20AQ6ZU45 233 aa12.96□□□□□ -0.33
MRPS28-201ENST00000276585 UBR7Q8N806 425 aa12.96□□□□□ -0.33
MRPS28-201ENST00000276585 FBXL13Q8NEE6 735 aa12.96□□□□□ -0.33
MRPS28-201ENST00000276585 TATDN2Q93075 761 aa12.96□□□□□ -0.33
MRPS28-201ENST00000276585 WBP1Q96G27 269 aa12.96□□□□□ -0.33
MRPS28-201ENST00000276585 DHTKD1Q96HY7 919 aaPredicted RBP12.96□□□□□ -0.33
MRPS28-201ENST00000276585 TSG101Q99816 390 aa12.96□□□□□ -0.33
MRPS28-201ENST00000276585 MED10Q9BTT4 135 aa12.96□□□□□ -0.33
MRPS28-201ENST00000276585 IMPG2Q9BZV3 1241 aa12.96□□□□□ -0.33
MRPS28-201ENST00000276585 RAB20Q9NX57 234 aa12.96□□□□□ -0.33
MRPS28-201ENST00000276585 CALCOCO1Q9P1Z2 691 aa12.96□□□□□ -0.33
MRPS28-201ENST00000276585 CYP8B1Q9UNU6 501 aa12.96□□□□□ -0.33
MRPS28-201ENST00000276585 WDR3Q9UNX4 943 aaKnown RBP eCLIP12.96□□□□□ -0.337e-6■■■■■ 27.7
MRPS28-201ENST00000276585 COL5A1P20908 1838 aaPredicted RBP12.96□□□□□ -0.33
MRPS28-201ENST00000276585 DOPEY2Q9Y3R5 2298 aa12.95□□□□□ -0.34
MRPS28-201ENST00000276585 KNTC1P50748 2209 aa12.95□□□□□ -0.34
MRPS28-201ENST00000276585 IGHV1OR15-9A0A0B4J2B8 117 aa12.95□□□□□ -0.34
MRPS28-201ENST00000276585 BIN1O00499 593 aa12.95□□□□□ -0.34
MRPS28-201ENST00000276585 PSMA7O14818 248 aa12.95□□□□□ -0.34
MRPS28-201ENST00000276585 NDUFS2O75306 463 aa12.95□□□□□ -0.34
MRPS28-201ENST00000276585 RTN3O95197 1032 aaPredicted RBP12.95□□□□□ -0.34
MRPS28-201ENST00000276585 JUPP14923 745 aa12.95□□□□□ -0.34
MRPS28-201ENST00000276585 MAOBP27338 520 aa12.95□□□□□ -0.34
MRPS28-201ENST00000276585 YWHAQP27348 245 aa12.95□□□□□ -0.34
MRPS28-201ENST00000276585 ADORA2BP29275 332 aa12.95□□□□□ -0.34
MRPS28-201ENST00000276585 MATKP42679 507 aa12.95□□□□□ -0.34
MRPS28-201ENST00000276585 TLE3Q04726 772 aa12.95□□□□□ -0.34
MRPS28-201ENST00000276585 DCAF17Q5H9S7 520 aaPredicted RBP12.95□□□□□ -0.34
MRPS28-201ENST00000276585 WDR45BQ5MNZ6 344 aa12.95□□□□□ -0.34
MRPS28-201ENST00000276585 EMC10Q5UCC4 262 aa12.95□□□□□ -0.34
MRPS28-201ENST00000276585 SNX30Q5VWJ9 437 aa12.95□□□□□ -0.34
MRPS28-201ENST00000276585 FOXR2Q6PJQ5 311 aa12.95□□□□□ -0.34
MRPS28-201ENST00000276585 TMPRSS12Q86WS5 348 aa12.95□□□□□ -0.34
MRPS28-201ENST00000276585 SFTPA1Q8IWL2 248 aa12.95□□□□□ -0.34
MRPS28-201ENST00000276585 SLC4A11Q8NBS3 891 aa12.95□□□□□ -0.34
MRPS28-201ENST00000276585 OVCA2Q8WZ82 227 aa12.95□□□□□ -0.34
MRPS28-201ENST00000276585 FBXO32Q969P5 355 aa12.95□□□□□ -0.34
MRPS28-201ENST00000276585 FAXDC2Q96IV6 333 aa12.95□□□□□ -0.34
MRPS28-201ENST00000276585 SLITRK1Q96PX8 696 aa12.95□□□□□ -0.34
MRPS28-201ENST00000276585 NT5C1AQ9BXI3 368 aa12.95□□□□□ -0.34
MRPS28-201ENST00000276585 GTPBP4Q9BZE4 634 aaKnown RBP12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms