RNA–Protein interactions for RNA: ENST00000276573.11

TRIM55-201, Transcript of tripartite motif containing 55, humanhuman

TSL 1 (best) BASIC

Gene TRIM55, Length 1,960 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55-201ENST00000276573 GMNCA6NCL1 334 aa9.93□□□□□ -0.82
TRIM55-201ENST00000276573 C5orf60A6NFR6 353 aa9.93□□□□□ -0.82
TRIM55-201ENST00000276573 HACD1B0YJ81 288 aa9.93□□□□□ -0.82
TRIM55-201ENST00000276573 TMEM189-UBE2V1I3L0A0 370 aa9.93□□□□□ -0.82
TRIM55-201ENST00000276573 TRAPPC3O43617 180 aa9.93□□□□□ -0.82
TRIM55-201ENST00000276573 CHN1P15882 459 aa9.93□□□□□ -0.82
TRIM55-201ENST00000276573 TSHRP16473 764 aa9.93□□□□□ -0.82
TRIM55-201ENST00000276573 GCAP28676 217 aa9.93□□□□□ -0.82
TRIM55-201ENST00000276573 YWHAHQ04917 246 aaPredicted RBP9.93□□□□□ -0.82
TRIM55-201ENST00000276573 RNASELQ05823 741 aaKnown RBP9.93□□□□□ -0.82
TRIM55-201ENST00000276573 GPNMBQ14956 572 aa9.93□□□□□ -0.82
TRIM55-201ENST00000276573 BBS9Q3SYG4 887 aa9.93□□□□□ -0.82
TRIM55-201ENST00000276573 EFHC2Q5JST6 749 aa9.93□□□□□ -0.82
TRIM55-201ENST00000276573 FAM182AQ5T1J6 154 aa9.93□□□□□ -0.82
TRIM55-201ENST00000276573 BSPRYQ5W0U4 402 aa9.93□□□□□ -0.82
TRIM55-201ENST00000276573 PPP1R21Q6ZMI0 780 aa9.93□□□□□ -0.82
TRIM55-201ENST00000276573 NLRP14Q86W24 1093 aa9.93□□□□□ -0.82
TRIM55-201ENST00000276573 ADAM32Q8TC27 787 aa9.93□□□□□ -0.82
TRIM55-201ENST00000276573 MAML1Q92585 1016 aa9.93□□□□□ -0.82
TRIM55-201ENST00000276573 CCT8L2Q96SF2 557 aa9.93□□□□□ -0.82
TRIM55-201ENST00000276573 XRN2Q9H0D6 950 aaKnown RBP eCLIP9.93□□□□□ -0.82
TRIM55-201ENST00000276573 PNPLA8Q9NP80 782 aa9.93□□□□□ -0.82
TRIM55-201ENST00000276573 TBC1D13Q9NVG8 400 aa9.93□□□□□ -0.82
TRIM55-201ENST00000276573 TMEM161AQ9NX61 479 aa9.93□□□□□ -0.82
TRIM55-201ENST00000276573 CLUHO75153 1309 aa9.93□□□□□ -0.82
TRIM55-201ENST00000276573 EXOC1LA0A1B0GW35 172 aa9.92□□□□□ -0.82
TRIM55-201ENST00000276573 FOXO6A8MYZ6 492 aa9.92□□□□□ -0.82
TRIM55-201ENST00000276573 NDUFAB1O14561 156 aa9.92□□□□□ -0.82
TRIM55-201ENST00000276573 CREB3O43889 395 aa9.92□□□□□ -0.82
TRIM55-201ENST00000276573 NBNO60934 754 aa9.92□□□□□ -0.82
TRIM55-201ENST00000276573 CREB1P16220 341 aa9.92□□□□□ -0.82
TRIM55-201ENST00000276573 PHBP35232 272 aa9.92□□□□□ -0.82
TRIM55-201ENST00000276573 MAGEA6P43360 314 aa9.92□□□□□ -0.82
TRIM55-201ENST00000276573 OR1G1P47890 313 aa9.92□□□□□ -0.82
TRIM55-201ENST00000276573 HCAR3P49019 387 aa9.92□□□□□ -0.82
TRIM55-201ENST00000276573 CXCR3P49682 368 aa9.92□□□□□ -0.82
TRIM55-201ENST00000276573 SCAPQ12770 1279 aa9.92□□□□□ -0.82
TRIM55-201ENST00000276573 SEMA3BQ13214 749 aa9.92□□□□□ -0.82
TRIM55-201ENST00000276573 BFSP2Q13515 415 aa9.92□□□□□ -0.82
TRIM55-201ENST00000276573 PAFAH1B3Q15102 231 aaKnown RBP9.92□□□□□ -0.82
TRIM55-201ENST00000276573 C4orf50Q6ZRC1 276 aa9.92□□□□□ -0.82
TRIM55-201ENST00000276573 C3orf62Q6ZUJ4 267 aa9.92□□□□□ -0.82
TRIM55-201ENST00000276573 SPATA2LQ8IUW3 424 aaPredicted RBP9.92□□□□□ -0.82
TRIM55-201ENST00000276573 PALM2Q8IXS6 379 aa9.92□□□□□ -0.82
TRIM55-201ENST00000276573 FBXO36Q8NEA4 188 aa9.92□□□□□ -0.82
TRIM55-201ENST00000276573 DBF4BQ8NFT6 615 aa9.92□□□□□ -0.82
TRIM55-201ENST00000276573 CCDC110Q8TBZ0 833 aa9.92□□□□□ -0.82
TRIM55-201ENST00000276573 TFB1MQ8WVM0 346 aaKnown RBP9.92□□□□□ -0.82
TRIM55-201ENST00000276573 EDEM1Q92611 657 aa9.92□□□□□ -0.82
TRIM55-201ENST00000276573 OLFM3Q96PB7 478 aa9.92□□□□□ -0.82
TRIM55-201ENST00000276573 QKIQ96PU8 341 aaKnown RBP eCLIP9.92□□□□□ -0.82
TRIM55-201ENST00000276573 FAM193BQ96PV7 902 aaPredicted RBP9.92□□□□□ -0.82
TRIM55-201ENST00000276573 XPO6Q96QU8 1125 aaKnown RBP9.92□□□□□ -0.82
TRIM55-201ENST00000276573 WDR83Q9BRX9 315 aaKnown RBP9.92□□□□□ -0.82
TRIM55-201ENST00000276573 FRMD8Q9BZ67 464 aaPredicted RBP9.92□□□□□ -0.82
TRIM55-201ENST00000276573 ELAC1Q9H777 363 aaKnown RBP9.92□□□□□ -0.82
TRIM55-201ENST00000276573 ETNK1Q9HBU6 452 aa9.92□□□□□ -0.82
TRIM55-201ENST00000276573 ANLNQ9NQW6 1124 aa9.92□□□□□ -0.82
TRIM55-201ENST00000276573 DDIT4Q9NX09 232 aa9.92□□□□□ -0.82
TRIM55-201ENST00000276573 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP9.92□□□□□ -0.82
TRIM55-201ENST00000276573 TBK1Q9UHD2 729 aa9.92□□□□□ -0.82
TRIM55-201ENST00000276573 RABGEF1Q9UJ41 708 aa9.92□□□□□ -0.82
TRIM55-201ENST00000276573 TSC2P49815 1807 aa9.92□□□□□ -0.82
TRIM55-201ENST00000276573 FRMPD3Q5JV73 1810 aa9.92□□□□□ -0.82
TRIM55-201ENST00000276573 POC1B-GALNT4F8VUJ3 575 aa9.92□□□□□ -0.82
TRIM55-201ENST00000276573 FAM72CH0Y354 149 aa9.92□□□□□ -0.82
TRIM55-201ENST00000276573 I6L893 689 aaPredicted RBP9.92□□□□□ -0.82
TRIM55-201ENST00000276573 EEF2KO00418 725 aaKnown RBP9.92□□□□□ -0.82
TRIM55-201ENST00000276573 OAZ2O95190 189 aa9.92□□□□□ -0.82
TRIM55-201ENST00000276573 METTL18O95568 372 aa9.92□□□□□ -0.82
TRIM55-201ENST00000276573 FAM107AO95990 144 aa9.92□□□□□ -0.82
TRIM55-201ENST00000276573 SSTR1P30872 391 aa9.92□□□□□ -0.82
TRIM55-201ENST00000276573 CCT5P48643 541 aa9.92□□□□□ -0.82
TRIM55-201ENST00000276573 DPYSQ14117 519 aa9.92□□□□□ -0.82
TRIM55-201ENST00000276573 RASA2Q15283 850 aa9.92□□□□□ -0.82
TRIM55-201ENST00000276573 ARL13BQ3SXY8 428 aa9.92□□□□□ -0.82
TRIM55-201ENST00000276573 PLEKHG4Q58EX7 1191 aa9.92□□□□□ -0.82
TRIM55-201ENST00000276573 FAM72AQ5TYM5 149 aa9.92□□□□□ -0.82
TRIM55-201ENST00000276573 FAM72DQ6L9T8 149 aa9.92□□□□□ -0.82
TRIM55-201ENST00000276573 VSTM1Q6UX27 236 aa9.92□□□□□ -0.82
TRIM55-201ENST00000276573 CAPN12Q6ZSI9 719 aa9.92□□□□□ -0.82
TRIM55-201ENST00000276573 RFX8Q6ZV50 586 aa9.92□□□□□ -0.82
TRIM55-201ENST00000276573 BEND5Q7L4P6 421 aa9.92□□□□□ -0.82
TRIM55-201ENST00000276573 TADA2BQ86TJ2 420 aa9.92□□□□□ -0.82
TRIM55-201ENST00000276573 FAM72BQ86X60 149 aa9.92□□□□□ -0.82
TRIM55-201ENST00000276573 IGDCC3Q8IVU1 814 aa9.92□□□□□ -0.82
TRIM55-201ENST00000276573 FAM126BQ8IXS8 530 aa9.92□□□□□ -0.82
TRIM55-201ENST00000276573 CCDC33Q8N5R6 958 aa9.92□□□□□ -0.82
TRIM55-201ENST00000276573 ATP11CQ8NB49 1132 aa9.92□□□□□ -0.82
TRIM55-201ENST00000276573 SH3TC2Q8TF17 1288 aa9.92□□□□□ -0.82
TRIM55-201ENST00000276573 ATXN2LQ8WWM7 1075 aaKnown RBP9.92□□□□□ -0.82
TRIM55-201ENST00000276573 COLEC11Q9BWP8 271 aa9.92□□□□□ -0.82
TRIM55-201ENST00000276573 KLC2Q9H0B6 622 aa9.92□□□□□ -0.82
TRIM55-201ENST00000276573 ZCWPW1Q9H0M4 648 aa9.92□□□□□ -0.82
TRIM55-201ENST00000276573 WDCPQ9H6R7 721 aa9.92□□□□□ -0.82
TRIM55-201ENST00000276573 PPCSQ9HAB8 311 aa9.92□□□□□ -0.82
TRIM55-201ENST00000276573 INTS9Q9NV88 658 aaKnown RBP9.92□□□□□ -0.82
TRIM55-201ENST00000276573 DNAJB4Q9UDY4 337 aa9.92□□□□□ -0.82
TRIM55-201ENST00000276573 RSPH14Q9UHP6 348 aa9.92□□□□□ -0.82
TRIM55-201ENST00000276573 SLC24A2Q9UI40 661 aa9.92□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms