RNA–Protein interactions for RNA: ENST00000273342.8

COL8A1-202, Transcript of collagen type VIII alpha 1 chain, humanhuman

APPRIS P1 TSL 2 BASIC

Gene COL8A1, Length 3,029 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-202ENST00000273342 AMHP03971 560 aa13.33□□□□□ -0.28
COL8A1-202ENST00000273342 GJB1P08034 283 aa13.33□□□□□ -0.28
COL8A1-202ENST00000273342 AOC1P19801 751 aa13.33□□□□□ -0.28
COL8A1-202ENST00000273342 EIF4BP23588 611 aaKnown RBP13.33□□□□□ -0.28
COL8A1-202ENST00000273342 PCSK6P29122 969 aa13.33□□□□□ -0.28
COL8A1-202ENST00000273342 GALK1P51570 392 aa13.33□□□□□ -0.28
COL8A1-202ENST00000273342 COG7P83436 770 aa13.33□□□□□ -0.28
COL8A1-202ENST00000273342 CYTH1Q15438 398 aa13.33□□□□□ -0.28
COL8A1-202ENST00000273342 KLHDC10Q6PID8 442 aa13.33□□□□□ -0.28
COL8A1-202ENST00000273342 UGT2A3Q6UWM9 527 aa13.33□□□□□ -0.28
COL8A1-202ENST00000273342 KYAT3Q6YP21 454 aaKnown RBP13.33□□□□□ -0.28
COL8A1-202ENST00000273342 CMC1Q7Z7K0 106 aa13.33□□□□□ -0.28
COL8A1-202ENST00000273342 SDCCAG8Q86SQ7 713 aaPredicted RBP13.33□□□□□ -0.28
COL8A1-202ENST00000273342 METTL25Q8N6Q8 603 aa13.33□□□□□ -0.28
COL8A1-202ENST00000273342 SLC7A3Q8WY07 619 aa13.33□□□□□ -0.28
COL8A1-202ENST00000273342 NCSTNQ92542 709 aa13.33□□□□□ -0.28
COL8A1-202ENST00000273342 RSAD1Q9HA92 442 aa13.33□□□□□ -0.28
COL8A1-202ENST00000273342 DNAAF2Q9NVR5 837 aaKnown RBP13.33□□□□□ -0.28
COL8A1-202ENST00000273342 HSFX1Q9UBD0 423 aa13.33□□□□□ -0.28
COL8A1-202ENST00000273342 TFAP2AP05549 437 aa13.32□□□□□ -0.28
COL8A1-202ENST00000273342 SP2Q02086 613 aa13.32□□□□□ -0.28
COL8A1-202ENST00000273342 WASHC5Q12768 1159 aa13.32□□□□□ -0.28
COL8A1-202ENST00000273342 PLD5Q8N7P1 536 aa13.32□□□□□ -0.28
COL8A1-202ENST00000273342 NIPA2Q8N8Q9 360 aa13.32□□□□□ -0.28
COL8A1-202ENST00000273342 FAM156AQ8NDB6 213 aa13.32□□□□□ -0.28
COL8A1-202ENST00000273342 RXFP2Q8WXD0 754 aa13.32□□□□□ -0.28
COL8A1-202ENST00000273342 DCUN1D1Q96GG9 259 aa13.32□□□□□ -0.28
COL8A1-202ENST00000273342 MARK4Q96L34 752 aa13.32□□□□□ -0.28
COL8A1-202ENST00000273342 KLC2Q9H0B6 622 aa13.32□□□□□ -0.28
COL8A1-202ENST00000273342 PDLIM7Q9NR12 457 aa13.32□□□□□ -0.28
COL8A1-202ENST00000273342 TRPC5Q9UL62 973 aaPredicted RBP13.32□□□□□ -0.28
COL8A1-202ENST00000273342 PHF24Q9UPV7 400 aa13.32□□□□□ -0.28
COL8A1-202ENST00000273342 CEP350Q5VT06 3117 aa13.32□□□□□ -0.28
COL8A1-202ENST00000273342 VILLO15195 856 aa13.32□□□□□ -0.28
COL8A1-202ENST00000273342 ZBTB14O43829 449 aa13.32□□□□□ -0.28
COL8A1-202ENST00000273342 PRPSAP2O60256 369 aa13.32□□□□□ -0.28
COL8A1-202ENST00000273342 FGF3P11487 239 aaPredicted RBP13.32□□□□□ -0.28
COL8A1-202ENST00000273342 FDFT1P37268 417 aa13.32□□□□□ -0.28
COL8A1-202ENST00000273342 NUDT2P50583 147 aa13.32□□□□□ -0.28
COL8A1-202ENST00000273342 YWHAEP62258 255 aaKnown RBP13.32□□□□□ -0.28
COL8A1-202ENST00000273342 TAP1Q03518 808 aa13.32□□□□□ -0.28
COL8A1-202ENST00000273342 OLIG2Q13516 323 aa13.32□□□□□ -0.28
COL8A1-202ENST00000273342 HNRNPDQ14103 355 aaKnown RBP13.32□□□□□ -0.28
COL8A1-202ENST00000273342 FAM91A1Q658Y4 838 aa13.32□□□□□ -0.28
COL8A1-202ENST00000273342 MBLAC2Q68D91 279 aa13.32□□□□□ -0.28
COL8A1-202ENST00000273342 TRNP1Q6NT89 227 aa13.32□□□□□ -0.28
COL8A1-202ENST00000273342 CMASQ8NFW8 434 aaPredicted RBP13.32□□□□□ -0.28
COL8A1-202ENST00000273342 PPP4R1Q8TF05 950 aa13.32□□□□□ -0.28
COL8A1-202ENST00000273342 LENG1Q96BZ8 264 aaPredicted RBP13.32□□□□□ -0.28
COL8A1-202ENST00000273342 WDR55Q9H6Y2 383 aaPredicted RBP13.32□□□□□ -0.28
COL8A1-202ENST00000273342 PICK1Q9NRD5 415 aa13.32□□□□□ -0.28
COL8A1-202ENST00000273342 EMCNQ9ULC0 261 aa13.32□□□□□ -0.28
COL8A1-202ENST00000273342 STX16-NPEPL1H3BU86 382 aa13.31□□□□□ -0.28
COL8A1-202ENST00000273342 NOP56O00567 594 aaKnown RBP13.31□□□□□ -0.28
COL8A1-202ENST00000273342 ALDOAP04075 364 aaKnown RBP13.31□□□□□ -0.28
COL8A1-202ENST00000273342 KCNA2P16389 499 aa13.31□□□□□ -0.28
COL8A1-202ENST00000273342 CRHR1P34998 444 aa13.31□□□□□ -0.28
COL8A1-202ENST00000273342 FSTL1Q12841 308 aa13.31□□□□□ -0.28
COL8A1-202ENST00000273342 PDE1CQ14123 709 aaPredicted RBP13.31□□□□□ -0.28
COL8A1-202ENST00000273342 DUOXA2Q1HG44 320 aa13.31□□□□□ -0.28
COL8A1-202ENST00000273342 SLFN12LQ6IEE8 588 aa13.31□□□□□ -0.28
COL8A1-202ENST00000273342 EEPD1Q7L9B9 569 aa13.31□□□□□ -0.28
COL8A1-202ENST00000273342 VSIG10LQ86VR7 867 aa13.31□□□□□ -0.28
COL8A1-202ENST00000273342 TMEM192Q8IY95 271 aa13.31□□□□□ -0.28
COL8A1-202ENST00000273342 LRRC71Q8N4P6 559 aa13.31□□□□□ -0.28
COL8A1-202ENST00000273342 ZFP28Q8NHY6 868 aa13.31□□□□□ -0.28
COL8A1-202ENST00000273342 FAM151AQ8WW52 585 aa13.31□□□□□ -0.28
COL8A1-202ENST00000273342 ITFG2Q969R8 447 aa13.31□□□□□ -0.28
COL8A1-202ENST00000273342 HEXIM2Q96MH2 286 aaKnown RBP13.31□□□□□ -0.28
COL8A1-202ENST00000273342 SLC38A10Q9HBR0 1119 aa13.31□□□□□ -0.28
COL8A1-202ENST00000273342 TMEM216Q9P0N5 145 aa13.31□□□□□ -0.28
COL8A1-202ENST00000273342 PAK5Q9P286 719 aa13.31□□□□□ -0.28
COL8A1-202ENST00000273342 AFG3L2Q9Y4W6 797 aa13.31□□□□□ -0.28
COL8A1-202ENST00000273342 H3BNX3 289 aa13.31□□□□□ -0.28
COL8A1-202ENST00000273342 CHADO15335 359 aa13.31□□□□□ -0.28
COL8A1-202ENST00000273342 LDHAP00338 332 aaKnown RBP13.31□□□□□ -0.28
COL8A1-202ENST00000273342 GSRP00390 522 aa13.31□□□□□ -0.28
COL8A1-202ENST00000273342 SMIM18P0DKX4 95 aa13.31□□□□□ -0.28
COL8A1-202ENST00000273342 SRGAP2BP0DMP2 458 aa13.31□□□□□ -0.28
COL8A1-202ENST00000273342 SAT1P21673 171 aa13.31□□□□□ -0.28
COL8A1-202ENST00000273342 ASPAP45381 313 aa13.31□□□□□ -0.28
COL8A1-202ENST00000273342 CCR10P46092 362 aa13.31□□□□□ -0.28
COL8A1-202ENST00000273342 ATXN1P54253 815 aaKnown RBP13.31□□□□□ -0.28
COL8A1-202ENST00000273342 GBE1Q04446 702 aa13.31□□□□□ -0.28
COL8A1-202ENST00000273342 AAGABQ6PD74 315 aa13.31□□□□□ -0.28
COL8A1-202ENST00000273342 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP13.31□□□□□ -0.28
COL8A1-202ENST00000273342 PQLC3Q8N755 202 aa13.31□□□□□ -0.28
COL8A1-202ENST00000273342 DGCR14Q96DF8 476 aaKnown RBP13.31□□□□□ -0.28
COL8A1-202ENST00000273342 DTNBP1Q96EV8 351 aa13.31□□□□□ -0.28
COL8A1-202ENST00000273342 MRIQ9BWK5 157 aa13.31□□□□□ -0.28
COL8A1-202ENST00000273342 C1orf21Q9H246 121 aa13.31□□□□□ -0.28
COL8A1-202ENST00000273342 KLHL2O95198 593 aa13.31□□□□□ -0.28
COL8A1-202ENST00000273342 CCND2P30279 289 aa13.31□□□□□ -0.28
COL8A1-202ENST00000273342 TCF7P36402 384 aaPredicted RBP13.31□□□□□ -0.28
COL8A1-202ENST00000273342 CAPSQ13938 189 aa13.31□□□□□ -0.28
COL8A1-202ENST00000273342 NRF1Q16656 503 aa13.31□□□□□ -0.28
COL8A1-202ENST00000273342 MYLK3Q32MK0 819 aa13.31□□□□□ -0.28
COL8A1-202ENST00000273342 SLC9B1Q4ZJI4 515 aa13.31□□□□□ -0.28
COL8A1-202ENST00000273342 FBXW8Q8N3Y1 598 aa13.31□□□□□ -0.28
COL8A1-202ENST00000273342 ZSCAN18Q8TBC5 510 aaPredicted RBP13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms