RNA–Protein interactions for RNA: ENST00000273062.6

CTDSP1-201, Transcript of CTD small phosphatase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTDSP1, Length 2,638 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-201ENST00000273062 ADGRD1Q6QNK2 874 aa16.22■□□□□ 0.19
CTDSP1-201ENST00000273062 MIER3Q7Z3K6 550 aa16.22■□□□□ 0.19
CTDSP1-201ENST00000273062 MTMR14Q8NCE2 650 aa16.22■□□□□ 0.19
CTDSP1-201ENST00000273062 DCPSQ96C86 337 aaKnown RBP16.22■□□□□ 0.19
CTDSP1-201ENST00000273062 NUF2Q9BZD4 464 aa16.22■□□□□ 0.19
CTDSP1-201ENST00000273062 EPHA3P29320 983 aa16.22■□□□□ 0.19
CTDSP1-201ENST00000273062 TMPRSS15P98073 1019 aa16.22■□□□□ 0.19
CTDSP1-201ENST00000273062 KLF1Q13351 362 aaPredicted RBP16.22■□□□□ 0.19
CTDSP1-201ENST00000273062 RGS21Q2M5E4 152 aa16.22■□□□□ 0.19
CTDSP1-201ENST00000273062 RARS2Q5T160 578 aaKnown RBP16.22■□□□□ 0.19
CTDSP1-201ENST00000273062 IL23RQ5VWK5 629 aa16.22■□□□□ 0.19
CTDSP1-201ENST00000273062 RINT1Q6NUQ1 792 aa16.22■□□□□ 0.19
CTDSP1-201ENST00000273062 ZCCHC23Q6ZST2 131 aa16.22■□□□□ 0.19
CTDSP1-201ENST00000273062 CHERPQ8IWX8 916 aaKnown RBP16.22■□□□□ 0.19
CTDSP1-201ENST00000273062 TEPSINQ96N21 525 aa16.22■□□□□ 0.19
CTDSP1-201ENST00000273062 HAUS8Q9BT25 410 aa16.22■□□□□ 0.19
CTDSP1-201ENST00000273062 NAA50Q9GZZ1 169 aaKnown RBP16.22■□□□□ 0.19
CTDSP1-201ENST00000273062 C7orf72A4D263 438 aa16.21■□□□□ 0.19
CTDSP1-201ENST00000273062 SDR42E2A6NKP2 422 aa16.21■□□□□ 0.19
CTDSP1-201ENST00000273062 MGEA5O60502 916 aa16.21■□□□□ 0.19
CTDSP1-201ENST00000273062 GAS7O60861 476 aa16.21■□□□□ 0.19
CTDSP1-201ENST00000273062 MTA2O94776 668 aa16.21■□□□□ 0.19
CTDSP1-201ENST00000273062 PSMC3P17980 439 aa16.21■□□□□ 0.19
CTDSP1-201ENST00000273062 COPAP53621 1224 aa16.21■□□□□ 0.19
CTDSP1-201ENST00000273062 IRX4P78413 519 aa16.21■□□□□ 0.19
CTDSP1-201ENST00000273062 ADGRE1Q14246 886 aa16.21■□□□□ 0.19
CTDSP1-201ENST00000273062 CEP55Q53EZ4 464 aa16.21■□□□□ 0.19
CTDSP1-201ENST00000273062 FKBP1CQ5VVH2 108 aa16.21■□□□□ 0.19
CTDSP1-201ENST00000273062 RWDD4Q6NW29 188 aaKnown RBP16.21■□□□□ 0.19
CTDSP1-201ENST00000273062 BTLAQ7Z6A9 289 aa16.21■□□□□ 0.19
CTDSP1-201ENST00000273062 ARHGEF19Q8IW93 802 aa16.21■□□□□ 0.19
CTDSP1-201ENST00000273062 TAB3Q8N5C8 712 aaPredicted RBP16.21■□□□□ 0.19
CTDSP1-201ENST00000273062 WNK4Q96J92 1243 aa16.21■□□□□ 0.19
CTDSP1-201ENST00000273062 LRGUKQ96M69 825 aa16.21■□□□□ 0.19
CTDSP1-201ENST00000273062 TRIM56Q9BRZ2 755 aaKnown RBP16.21■□□□□ 0.19
CTDSP1-201ENST00000273062 EPS15L1Q9UBC2 864 aa16.21■□□□□ 0.19
CTDSP1-201ENST00000273062 PLOD2O00469 737 aa16.21■□□□□ 0.19
CTDSP1-201ENST00000273062 DNALI1O14645 258 aaPredicted RBP16.21■□□□□ 0.19
CTDSP1-201ENST00000273062 ALOX15BO15296 676 aa16.21■□□□□ 0.19
CTDSP1-201ENST00000273062 GCNT3O95395 438 aa16.21■□□□□ 0.19
CTDSP1-201ENST00000273062 ASNSP08243 561 aa16.21■□□□□ 0.19
CTDSP1-201ENST00000273062 MAN1A1P33908 653 aa16.21■□□□□ 0.19
CTDSP1-201ENST00000273062 PTGER2P43116 358 aa16.21■□□□□ 0.19
CTDSP1-201ENST00000273062 NKX2-5P52952 324 aaPredicted RBP16.21■□□□□ 0.19
CTDSP1-201ENST00000273062 GPS1Q13098 491 aa16.21■□□□□ 0.19
CTDSP1-201ENST00000273062 TCEAL1Q15170 157 aa16.21■□□□□ 0.19
CTDSP1-201ENST00000273062 GPR162Q16538 588 aa16.21■□□□□ 0.19
CTDSP1-201ENST00000273062 TBC1D10BQ4KMP7 808 aaPredicted RBP16.21■□□□□ 0.19
CTDSP1-201ENST00000273062 PRAMEF18Q5VWM3 479 aa16.21■□□□□ 0.19
CTDSP1-201ENST00000273062 FRMD7Q6ZUT3 714 aa16.21■□□□□ 0.19
CTDSP1-201ENST00000273062 FBXW8Q8N3Y1 598 aa16.21■□□□□ 0.19
CTDSP1-201ENST00000273062 MMP19Q99542 508 aa16.21■□□□□ 0.19
CTDSP1-201ENST00000273062 PKP2Q99959 881 aa16.21■□□□□ 0.19
CTDSP1-201ENST00000273062 ZNF577Q9BSK1 485 aa16.21■□□□□ 0.19
CTDSP1-201ENST00000273062 KLHL25Q9H0H3 589 aa16.21■□□□□ 0.19
CTDSP1-201ENST00000273062 MRPL46Q9H2W6 279 aaKnown RBP16.21■□□□□ 0.19
CTDSP1-201ENST00000273062 C6orf203Q9P0P8 240 aaPredicted RBP16.21■□□□□ 0.19
CTDSP1-201ENST00000273062 FEM1BQ9UK73 627 aa16.21■□□□□ 0.19
CTDSP1-201ENST00000273062 MRPL11Q9Y3B7 192 aaKnown RBP16.21■□□□□ 0.19
CTDSP1-201ENST00000273062 PDXKO00764 312 aa16.2■□□□□ 0.18
CTDSP1-201ENST00000273062 CALUO43852 315 aaPredicted RBP16.2■□□□□ 0.18
CTDSP1-201ENST00000273062 H6PDO95479 791 aa16.2■□□□□ 0.18
CTDSP1-201ENST00000273062 ITGB5P18084 799 aa16.2■□□□□ 0.18
CTDSP1-201ENST00000273062 NMT1P30419 496 aaKnown RBP16.2■□□□□ 0.18
CTDSP1-201ENST00000273062 IFITM2Q01629 132 aa16.2■□□□□ 0.18
CTDSP1-201ENST00000273062 CHI3L2Q15782 390 aa16.2■□□□□ 0.18
CTDSP1-201ENST00000273062 DALRD3Q5D0E6 543 aaKnown RBP16.2■□□□□ 0.18
CTDSP1-201ENST00000273062 PLEKHA7Q6IQ23 1121 aa16.2■□□□□ 0.18
CTDSP1-201ENST00000273062 CENPUQ71F23 418 aa16.2■□□□□ 0.18
CTDSP1-201ENST00000273062 SETD3Q86TU7 594 aaPredicted RBP16.2■□□□□ 0.18
CTDSP1-201ENST00000273062 MCF2L2Q86YR7 1114 aa16.2■□□□□ 0.18
CTDSP1-201ENST00000273062 BBOF1Q8ND07 529 aa16.2■□□□□ 0.18
CTDSP1-201ENST00000273062 NLRP7Q8WX94 980 aa16.2■□□□□ 0.18
CTDSP1-201ENST00000273062 SH3GL1Q99961 368 aa16.2■□□□□ 0.18
CTDSP1-201ENST00000273062 DHRS4Q9BTZ2 278 aa16.2■□□□□ 0.18
CTDSP1-201ENST00000273062 RAVER2Q9HCJ3 691 aaKnown RBP16.2■□□□□ 0.18
CTDSP1-201ENST00000273062 UBE2TQ9NPD8 197 aaPredicted RBP16.2■□□□□ 0.18
CTDSP1-201ENST00000273062 A0A0B4J269 797 aa16.2■□□□□ 0.18
CTDSP1-201ENST00000273062 TGFB1I1O43294 461 aa16.2■□□□□ 0.18
CTDSP1-201ENST00000273062 KLHL41O60662 606 aa16.2■□□□□ 0.18
CTDSP1-201ENST00000273062 MT-ND3P03897 115 aa16.2■□□□□ 0.18
CTDSP1-201ENST00000273062 GJC1P36383 396 aa16.2■□□□□ 0.18
CTDSP1-201ENST00000273062 IREB2P48200 963 aaKnown RBP16.2■□□□□ 0.18
CTDSP1-201ENST00000273062 TUBB3Q13509 450 aa16.2■□□□□ 0.18
CTDSP1-201ENST00000273062 C2CD6Q53TS8 623 aa16.2■□□□□ 0.18
CTDSP1-201ENST00000273062 AARS2Q5JTZ9 985 aaKnown RBP16.2■□□□□ 0.18
CTDSP1-201ENST00000273062 LYSMD3Q7Z3D4 306 aa16.2■□□□□ 0.18
CTDSP1-201ENST00000273062 SLC43A3Q8NBI5 491 aa16.2■□□□□ 0.18
CTDSP1-201ENST00000273062 TFB1MQ8WVM0 346 aaKnown RBP16.2■□□□□ 0.18
CTDSP1-201ENST00000273062 SGF29Q96ES7 293 aa16.2■□□□□ 0.18
CTDSP1-201ENST00000273062 APOPT1Q96IL0 206 aa16.2■□□□□ 0.18
CTDSP1-201ENST00000273062 RPF2Q9H7B2 306 aaKnown RBP16.2■□□□□ 0.18
CTDSP1-201ENST00000273062 OLAHQ9NV23 265 aa16.2■□□□□ 0.18
CTDSP1-201ENST00000273062 KLHL11Q9NVR0 708 aa16.2■□□□□ 0.18
CTDSP1-201ENST00000273062 ERVK-11Q9UQG0 969 aa16.2■□□□□ 0.18
CTDSP1-201ENST00000273062 ERGIC3Q9Y282 383 aa16.2■□□□□ 0.18
CTDSP1-201ENST00000273062 H3BMQ9 156 aa16.19■□□□□ 0.18
CTDSP1-201ENST00000273062 TBCAO75347 108 aaKnown RBP16.19■□□□□ 0.18
CTDSP1-201ENST00000273062 CALCAP01258 141 aa16.19■□□□□ 0.18
CTDSP1-201ENST00000273062 APOEP02649 317 aa16.19■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms