RNA–Protein interactions for RNA: ENST00000271850.11

TPM3-201, Transcript of tropomyosin 3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene TPM3, Length 1,219 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-201ENST00000271850 MRGPRX1Q96LB2 322 aa9.43□□□□□ -0.9
TPM3-201ENST00000271850 SPSB2Q99619 263 aa9.43□□□□□ -0.9
TPM3-201ENST00000271850 ARID3AQ99856 593 aa9.43□□□□□ -0.9
TPM3-201ENST00000271850 BBS2Q9BXC9 721 aa9.43□□□□□ -0.9
TPM3-201ENST00000271850 GOLPH3LQ9H4A5 285 aa9.43□□□□□ -0.9
TPM3-201ENST00000271850 FBXO44Q9H4M3 255 aa9.43□□□□□ -0.9
TPM3-201ENST00000271850 EXOC1Q9NV70 894 aa9.43□□□□□ -0.9
TPM3-201ENST00000271850 FAM13BQ9NYF5 915 aa9.43□□□□□ -0.9
TPM3-201ENST00000271850 GMPR2Q9P2T1 348 aaKnown RBP9.43□□□□□ -0.9
TPM3-201ENST00000271850 KLK13Q9UKR3 277 aa9.43□□□□□ -0.9
TPM3-201ENST00000271850 CYP8B1Q9UNU6 501 aa9.43□□□□□ -0.9
TPM3-201ENST00000271850 SLCO1B1Q9Y6L6 691 aa9.43□□□□□ -0.9
TPM3-201ENST00000271850 NBEAQ8NFP9 2946 aa9.42□□□□□ -0.9
TPM3-201ENST00000271850 UPK3BL1B0FP48 263 aa9.42□□□□□ -0.9
TPM3-201ENST00000271850 KCNJ18B7U540 433 aa9.42□□□□□ -0.9
TPM3-201ENST00000271850 UPK3BL2E5RIL1 263 aa9.42□□□□□ -0.9
TPM3-201ENST00000271850 TAF4O00268 1085 aa9.42□□□□□ -0.9
TPM3-201ENST00000271850 IKBKBO14920 756 aa9.42□□□□□ -0.9
TPM3-201ENST00000271850 WIPF1O43516 503 aa9.42□□□□□ -0.9
TPM3-201ENST00000271850 RHOBTB3O94955 611 aa9.42□□□□□ -0.9
TPM3-201ENST00000271850 RPN1P04843 607 aaKnown RBP9.42□□□□□ -0.9
TPM3-201ENST00000271850 PDIA4P13667 645 aaKnown RBP9.42□□□□□ -0.9
TPM3-201ENST00000271850 CD58P19256 250 aa9.42□□□□□ -0.9
TPM3-201ENST00000271850 ATP5C1P36542 298 aaKnown RBP9.42□□□□□ -0.9
TPM3-201ENST00000271850 PIK3CAP42336 1068 aa9.42□□□□□ -0.9
TPM3-201ENST00000271850 IL12RB1P42701 662 aa9.42□□□□□ -0.9
TPM3-201ENST00000271850 VAMP7P51809 220 aa9.42□□□□□ -0.9
TPM3-201ENST00000271850 NDUFA8P51970 172 aa9.42□□□□□ -0.9
TPM3-201ENST00000271850 MFAP3P55082 362 aa9.42□□□□□ -0.9
TPM3-201ENST00000271850 BNC1Q01954 994 aa9.42□□□□□ -0.9
TPM3-201ENST00000271850 DPYDQ12882 1025 aa9.42□□□□□ -0.9
TPM3-201ENST00000271850 ENPP2Q13822 863 aa9.42□□□□□ -0.9
TPM3-201ENST00000271850 NFIL3Q16649 462 aa9.42□□□□□ -0.9
TPM3-201ENST00000271850 GEN1Q17RS7 908 aa9.42□□□□□ -0.9
TPM3-201ENST00000271850 TMEM215Q68D42 235 aa9.42□□□□□ -0.9
TPM3-201ENST00000271850 CCDC186Q7Z3E2 898 aa9.42□□□□□ -0.9
TPM3-201ENST00000271850 CEP57L1Q8IYX8 460 aa9.42□□□□□ -0.9
TPM3-201ENST00000271850 PGBD3Q8N328 593 aa9.42□□□□□ -0.9
TPM3-201ENST00000271850 NDRG1Q92597 394 aaKnown RBP9.42□□□□□ -0.9
TPM3-201ENST00000271850 TAF4BQ92750 862 aa9.42□□□□□ -0.9
TPM3-201ENST00000271850 PIWIL1Q96J94 861 aaKnown RBP9.42□□□□□ -0.9
TPM3-201ENST00000271850 HSPA12BQ96MM6 686 aa9.42□□□□□ -0.9
TPM3-201ENST00000271850 CAMK1GQ96NX5 476 aa9.42□□□□□ -0.9
TPM3-201ENST00000271850 MKRN2Q9H000 416 aaKnown RBP9.42□□□□□ -0.9
TPM3-201ENST00000271850 PNPLA8Q9NP80 782 aa9.42□□□□□ -0.9
TPM3-201ENST00000271850 TLR8Q9NR97 1041 aaKnown RBP9.42□□□□□ -0.9
TPM3-201ENST00000271850 DACH1Q9UI36 760 aa9.42□□□□□ -0.9
TPM3-201ENST00000271850 MAPK8IP1Q9UQF2 711 aa9.42□□□□□ -0.9
TPM3-201ENST00000271850 CKAP5Q14008 2032 aa9.42□□□□□ -0.9
TPM3-201ENST00000271850 NUMA1Q14980 2115 aa9.41□□□□□ -0.9
TPM3-201ENST00000271850 GFRA2O00451 464 aa9.41□□□□□ -0.9
TPM3-201ENST00000271850 MAPK13O15264 365 aa9.41□□□□□ -0.9
TPM3-201ENST00000271850 AP5Z1O43299 807 aa9.41□□□□□ -0.9
TPM3-201ENST00000271850 CFIP05156 583 aa9.41□□□□□ -0.9
TPM3-201ENST00000271850 SERPINF2P08697 491 aa9.41□□□□□ -0.9
TPM3-201ENST00000271850 CMA1P23946 247 aa9.41□□□□□ -0.9
TPM3-201ENST00000271850 NR2F2P24468 414 aa9.41□□□□□ -0.9
TPM3-201ENST00000271850 MAOBP27338 520 aa9.41□□□□□ -0.9
TPM3-201ENST00000271850 HOXD12P35452 270 aa9.41□□□□□ -0.9
TPM3-201ENST00000271850 DGKGP49619 791 aa9.41□□□□□ -0.9
TPM3-201ENST00000271850 COPAP53621 1224 aa9.41□□□□□ -0.9
TPM3-201ENST00000271850 RAD23BP54727 409 aa9.41□□□□□ -0.9
TPM3-201ENST00000271850 LMAN2Q12907 356 aa9.41□□□□□ -0.9
TPM3-201ENST00000271850 DUOXA1Q1HG43 343 aa9.41□□□□□ -0.9
TPM3-201ENST00000271850 FUT11Q495W5 492 aa9.41□□□□□ -0.9
TPM3-201ENST00000271850 ZNF394Q53GI3 561 aa9.41□□□□□ -0.9
TPM3-201ENST00000271850 RAB41Q5JT25 222 aa9.41□□□□□ -0.9
TPM3-201ENST00000271850 BTBD8Q5XKL5 378 aa9.41□□□□□ -0.9
TPM3-201ENST00000271850 TRMT11Q7Z4G4 463 aaKnown RBP9.41□□□□□ -0.9
TPM3-201ENST00000271850 SMYD4Q8IYR2 804 aaPredicted RBP9.41□□□□□ -0.9
TPM3-201ENST00000271850 CHPFQ8IZ52 775 aa9.41□□□□□ -0.9
TPM3-201ENST00000271850 ZNF276Q8N554 614 aa9.41□□□□□ -0.9
TPM3-201ENST00000271850 MINDY1Q8N5J2 469 aa9.41□□□□□ -0.9
TPM3-201ENST00000271850 TRIML1Q8N9V2 468 aa9.41□□□□□ -0.9
TPM3-201ENST00000271850 SLC4A11Q8NBS3 891 aa9.41□□□□□ -0.9
TPM3-201ENST00000271850 EEF2KMTQ96G04 330 aa9.41□□□□□ -0.9
TPM3-201ENST00000271850 ZNF419Q96HQ0 510 aaPredicted RBP9.41□□□□□ -0.9
TPM3-201ENST00000271850 NT5C1AQ9BXI3 368 aa9.41□□□□□ -0.9
TPM3-201ENST00000271850 NUSAP1Q9BXS6 441 aaKnown RBP9.41□□□□□ -0.9
TPM3-201ENST00000271850 DUSP16Q9BY84 665 aa9.41□□□□□ -0.9
TPM3-201ENST00000271850 NIF3L1Q9GZT8 377 aa9.41□□□□□ -0.9
TPM3-201ENST00000271850 NACA2Q9H009 215 aa9.41□□□□□ -0.9
TPM3-201ENST00000271850 CYP3A43Q9HB55 503 aa9.41□□□□□ -0.9
TPM3-201ENST00000271850 TOR4AQ9NXH8 423 aa9.41□□□□□ -0.9
TPM3-201ENST00000271850 USP36Q9P275 1121 aaKnown RBP9.41□□□□□ -0.9
TPM3-201ENST00000271850 AGO1Q9UL18 857 aaKnown RBP9.41□□□□□ -0.9
TPM3-201ENST00000271850 SLC6A14Q9UN76 642 aa9.41□□□□□ -0.9
TPM3-201ENST00000271850 SLC27A6Q9Y2P4 619 aa9.41□□□□□ -0.9
TPM3-201ENST00000271850 PCDHA5Q9Y5H7 936 aa9.41□□□□□ -0.9
TPM3-201ENST00000271850 ATRXP46100 2492 aa9.4□□□□□ -0.9
TPM3-201ENST00000271850 SRRM3A6NNA2 597 aaPredicted RBP9.4□□□□□ -0.9
TPM3-201ENST00000271850 CLSTN1O94985 981 aa9.4□□□□□ -0.9
TPM3-201ENST00000271850 HMBSP08397 361 aa9.4□□□□□ -0.9
TPM3-201ENST00000271850 PRKCHP24723 683 aa9.4□□□□□ -0.9
TPM3-201ENST00000271850 CORO1AP31146 461 aaKnown RBP9.4□□□□□ -0.9
TPM3-201ENST00000271850 PLA2G4AP47712 749 aa9.4□□□□□ -0.9
TPM3-201ENST00000271850 CBWD6Q4V339 395 aa9.4□□□□□ -0.9
TPM3-201ENST00000271850 CBWD3Q5JTY5 395 aa9.4□□□□□ -0.9
TPM3-201ENST00000271850 CBWD5Q5RIA9 395 aa9.4□□□□□ -0.9
TPM3-201ENST00000271850 C10orf120Q5SQS8 335 aa9.4□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms