RNA–Protein interactions for RNA: ENST00000269318.9

CCDC40-201, Transcript of coiled-coil domain containing 40, humanhuman

TSL 2 BASIC

Gene CCDC40, Length 1,970 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-201ENST00000269318 PATJQ8NI35 1801 aa17.22■□□□□ 0.35
CCDC40-201ENST00000269318 H3BRJ5 948 aa17.22■□□□□ 0.35
CCDC40-201ENST00000269318 AMHP03971 560 aa17.22■□□□□ 0.35
CCDC40-201ENST00000269318 COL6A1P12109 1028 aa17.22■□□□□ 0.35
CCDC40-201ENST00000269318 MAGEA6P43360 314 aa17.22■□□□□ 0.35
CCDC40-201ENST00000269318 GPX6P59796 221 aa17.22■□□□□ 0.35
CCDC40-201ENST00000269318 RNASELQ05823 741 aaKnown RBP17.22■□□□□ 0.35
CCDC40-201ENST00000269318 CCDC38Q502W7 563 aa17.22■□□□□ 0.35
CCDC40-201ENST00000269318 EFHC2Q5JST6 749 aa17.22■□□□□ 0.35
CCDC40-201ENST00000269318 FAM182AQ5T1J6 154 aa17.22■□□□□ 0.35
CCDC40-201ENST00000269318 CYP4X1Q8N118 509 aa17.22■□□□□ 0.35
CCDC40-201ENST00000269318 SH3TC2Q8TF17 1288 aa17.22■□□□□ 0.35
CCDC40-201ENST00000269318 ARHGEF2Q92974 986 aaKnown RBP17.22■□□□□ 0.35
CCDC40-201ENST00000269318 CENPTQ96BT3 561 aa17.22■□□□□ 0.35
CCDC40-201ENST00000269318 KANSL3Q9P2N6 904 aa17.22■□□□□ 0.35
CCDC40-201ENST00000269318 FBXW11Q9UKB1 542 aa17.22■□□□□ 0.35
CCDC40-201ENST00000269318 SF3B1O75533 1304 aaKnown RBP eCLIP17.22■□□□□ 0.35
CCDC40-201ENST00000269318 E7EVH7 732 aa17.22■□□□□ 0.35
CCDC40-201ENST00000269318 DNM1LO00429 736 aa17.22■□□□□ 0.35
CCDC40-201ENST00000269318 GCATO75600 419 aa17.22■□□□□ 0.35
CCDC40-201ENST00000269318 OAZ2O95190 189 aa17.22■□□□□ 0.35
CCDC40-201ENST00000269318 ATP5DP30049 168 aa17.22■□□□□ 0.35
CCDC40-201ENST00000269318 SEMA3BQ13214 749 aa17.22■□□□□ 0.35
CCDC40-201ENST00000269318 DPYSQ14117 519 aa17.22■□□□□ 0.35
CCDC40-201ENST00000269318 TAOK1Q7L7X3 1001 aa17.22■□□□□ 0.35
CCDC40-201ENST00000269318 TDRPQ86YL5 185 aa17.22■□□□□ 0.35
CCDC40-201ENST00000269318 ANKMY2Q8IV38 441 aa17.22■□□□□ 0.35
CCDC40-201ENST00000269318 RABEP2Q9H5N1 569 aa17.22■□□□□ 0.35
CCDC40-201ENST00000269318 ELAC1Q9H777 363 aaKnown RBP17.22■□□□□ 0.35
CCDC40-201ENST00000269318 RAB6BQ9NRW1 208 aa17.22■□□□□ 0.35
CCDC40-201ENST00000269318 DNAJB4Q9UDY4 337 aa17.22■□□□□ 0.35
CCDC40-201ENST00000269318 TRAPPC3O43617 180 aa17.21■□□□□ 0.35
CCDC40-201ENST00000269318 MFSD11O43934 449 aa17.21■□□□□ 0.35
CCDC40-201ENST00000269318 CHN1P15882 459 aa17.21■□□□□ 0.35
CCDC40-201ENST00000269318 PLEKHG4Q58EX7 1191 aa17.21■□□□□ 0.35
CCDC40-201ENST00000269318 BSPRYQ5W0U4 402 aa17.21■□□□□ 0.35
CCDC40-201ENST00000269318 C4orf22Q6V702 233 aa17.21■□□□□ 0.35
CCDC40-201ENST00000269318 PDIK1LQ8N165 341 aa17.21■□□□□ 0.35
CCDC40-201ENST00000269318 RIBC1Q8N443 379 aaPredicted RBP17.21■□□□□ 0.35
CCDC40-201ENST00000269318 CCDC110Q8TBZ0 833 aa17.21■□□□□ 0.35
CCDC40-201ENST00000269318 EDEM1Q92611 657 aa17.21■□□□□ 0.35
CCDC40-201ENST00000269318 SELENOSQ9BQE4 189 aa17.21■□□□□ 0.35
CCDC40-201ENST00000269318 UNC93B1Q9H1C4 597 aa17.21■□□□□ 0.35
CCDC40-201ENST00000269318 DDIT4Q9NX09 232 aa17.21■□□□□ 0.35
CCDC40-201ENST00000269318 SAGE1Q9NXZ1 904 aa17.21■□□□□ 0.35
CCDC40-201ENST00000269318 PRDM4Q9UKN5 801 aa17.21■□□□□ 0.35
CCDC40-201ENST00000269318 EXOC1LA0A1B0GW35 172 aa17.2■□□□□ 0.34
CCDC40-201ENST00000269318 C5orf60A6NFR6 353 aa17.2■□□□□ 0.34
CCDC40-201ENST00000269318 HACD1B0YJ81 288 aa17.2■□□□□ 0.34
CCDC40-201ENST00000269318 FAM72CH0Y354 149 aa17.2■□□□□ 0.34
CCDC40-201ENST00000269318 ENPP3O14638 875 aa17.2■□□□□ 0.34
CCDC40-201ENST00000269318 OR1G1P47890 313 aa17.2■□□□□ 0.34
CCDC40-201ENST00000269318 SEC24CP53992 1094 aa17.2■□□□□ 0.34
CCDC40-201ENST00000269318 BFSP2Q13515 415 aa17.2■□□□□ 0.34
CCDC40-201ENST00000269318 PAFAH1B3Q15102 231 aaKnown RBP17.2■□□□□ 0.34
CCDC40-201ENST00000269318 FAM72AQ5TYM5 149 aa17.2■□□□□ 0.34
CCDC40-201ENST00000269318 FAM72DQ6L9T8 149 aa17.2■□□□□ 0.34
CCDC40-201ENST00000269318 C4orf50Q6ZRC1 276 aa17.2■□□□□ 0.34
CCDC40-201ENST00000269318 RFX8Q6ZV50 586 aa17.2■□□□□ 0.34
CCDC40-201ENST00000269318 BEND5Q7L4P6 421 aa17.2■□□□□ 0.34
CCDC40-201ENST00000269318 FAM72BQ86X60 149 aa17.2■□□□□ 0.34
CCDC40-201ENST00000269318 CCDC33Q8N5R6 958 aa17.2■□□□□ 0.34
CCDC40-201ENST00000269318 FBXO36Q8NEA4 188 aa17.2■□□□□ 0.34
CCDC40-201ENST00000269318 DBF4BQ8NFT6 615 aa17.2■□□□□ 0.34
CCDC40-201ENST00000269318 SCAMP5Q8TAC9 235 aa17.2■□□□□ 0.34
CCDC40-201ENST00000269318 PYROXD1Q8WU10 500 aa17.2■□□□□ 0.34
CCDC40-201ENST00000269318 ATXN2LQ8WWM7 1075 aaKnown RBP17.2■□□□□ 0.34
CCDC40-201ENST00000269318 MAML1Q92585 1016 aa17.2■□□□□ 0.34
CCDC40-201ENST00000269318 COLEC11Q9BWP8 271 aa17.2■□□□□ 0.34
CCDC40-201ENST00000269318 VPS37BQ9H9H4 285 aa17.2■□□□□ 0.34
CCDC40-201ENST00000269318 TRIM17Q9Y577 477 aa17.2■□□□□ 0.34
CCDC40-201ENST00000269318 TNFRSF10BO14763 440 aa17.2■□□□□ 0.34
CCDC40-201ENST00000269318 DCLK1O15075 740 aa17.2■□□□□ 0.34
CCDC40-201ENST00000269318 CREB3O43889 395 aa17.2■□□□□ 0.34
CCDC40-201ENST00000269318 F9P00740 461 aa17.2■□□□□ 0.34
CCDC40-201ENST00000269318 VAV1P15498 845 aa17.2■□□□□ 0.34
CCDC40-201ENST00000269318 CREB1P16220 341 aa17.2■□□□□ 0.34
CCDC40-201ENST00000269318 CXCR3P49682 368 aa17.2■□□□□ 0.34
CCDC40-201ENST00000269318 HTRA3P83110 453 aa17.2■□□□□ 0.34
CCDC40-201ENST00000269318 PPP1R21Q6ZMI0 780 aa17.2■□□□□ 0.34
CCDC40-201ENST00000269318 BZW1Q7L1Q6 419 aaKnown RBP17.2■□□□□ 0.34
CCDC40-201ENST00000269318 SPATA2LQ8IUW3 424 aaPredicted RBP17.2■□□□□ 0.34
CCDC40-201ENST00000269318 ATP11CQ8NB49 1132 aa17.2■□□□□ 0.34
CCDC40-201ENST00000269318 KLC2Q9H0B6 622 aa17.2■□□□□ 0.34
CCDC40-201ENST00000269318 ZCWPW1Q9H0M4 648 aa17.2■□□□□ 0.34
CCDC40-201ENST00000269318 ETNK1Q9HBU6 452 aa17.2■□□□□ 0.34
CCDC40-201ENST00000269318 PRG3Q9Y2Y8 225 aaPredicted RBP17.2■□□□□ 0.34
CCDC40-201ENST00000269318 FOXO6A8MYZ6 492 aa17.19■□□□□ 0.34
CCDC40-201ENST00000269318 EEF2KO00418 725 aaKnown RBP17.19■□□□□ 0.34
CCDC40-201ENST00000269318 OR4Q2P0C623 313 aa17.19■□□□□ 0.34
CCDC40-201ENST00000269318 TSHRP16473 764 aa17.19■□□□□ 0.34
CCDC40-201ENST00000269318 SSTR1P30872 391 aa17.19■□□□□ 0.34
CCDC40-201ENST00000269318 PRKD1Q15139 912 aaPredicted RBP17.19■□□□□ 0.34
CCDC40-201ENST00000269318 BBS9Q3SYG4 887 aa17.19■□□□□ 0.34
CCDC40-201ENST00000269318 FAXCQ5TGI0 409 aa17.19■□□□□ 0.34
CCDC40-201ENST00000269318 VSTM1Q6UX27 236 aa17.19■□□□□ 0.34
CCDC40-201ENST00000269318 CAPN12Q6ZSI9 719 aa17.19■□□□□ 0.34
CCDC40-201ENST00000269318 TAC4Q86UU9 113 aa17.19■□□□□ 0.34
CCDC40-201ENST00000269318 NLRP14Q86W24 1093 aa17.19■□□□□ 0.34
CCDC40-201ENST00000269318 TFB1MQ8WVM0 346 aaKnown RBP17.19■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms