RNA–Protein interactions for RNA: ENST00000267199.8

VPS33A-201, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS33A, Length 4,586 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-201ENST00000267199 ARHGAP8P85298 464 aa11.88□□□□□ -0.51
VPS33A-201ENST00000267199 NFIL3Q16649 462 aa11.88□□□□□ -0.51
VPS33A-201ENST00000267199 UGP2Q16851 508 aa11.88□□□□□ -0.51
VPS33A-201ENST00000267199 SLC5A9Q2M3M2 681 aa11.88□□□□□ -0.51
VPS33A-201ENST00000267199 MFSD5Q6N075 450 aa11.88□□□□□ -0.51
VPS33A-201ENST00000267199 ASAP3Q8TDY4 903 aa11.88□□□□□ -0.51
VPS33A-201ENST00000267199 ULK4Q96C45 1275 aa11.88□□□□□ -0.51
VPS33A-201ENST00000267199 RUBCNLQ9H714 662 aa11.88□□□□□ -0.51
VPS33A-201ENST00000267199 SIX2Q9NPC8 291 aa11.88□□□□□ -0.51
VPS33A-201ENST00000267199 IGLV3-22A0A075B6J6 115 aa11.87□□□□□ -0.51
VPS33A-201ENST00000267199 C5orf60A6NFR6 353 aa11.87□□□□□ -0.51
VPS33A-201ENST00000267199 GOLGA8CPA6NN73 597 aa11.87□□□□□ -0.51
VPS33A-201ENST00000267199 M0QYT0 321 aa11.87□□□□□ -0.51
VPS33A-201ENST00000267199 CYP2C9P11712 490 aa11.87□□□□□ -0.51
VPS33A-201ENST00000267199 EIF2B2P49770 351 aaKnown RBP11.87□□□□□ -0.51
VPS33A-201ENST00000267199 NOMO3P69849 1222 aa11.87□□□□□ -0.51
VPS33A-201ENST00000267199 PTAR1Q7Z6K3 402 aaPredicted RBP11.87□□□□□ -0.51
VPS33A-201ENST00000267199 USP6NLQ92738 828 aa11.87□□□□□ -0.51
VPS33A-201ENST00000267199 NRDE2Q9H7Z3 1164 aa11.87□□□□□ -0.51
VPS33A-201ENST00000267199 KIAA1257Q9ULG3 409 aa11.87□□□□□ -0.51
VPS33A-201ENST00000267199 CHKBQ9Y259 395 aa11.87□□□□□ -0.51
VPS33A-201ENST00000267199 WASF2Q9Y6W5 498 aa11.87□□□□□ -0.51
VPS33A-201ENST00000267199 COMMD3-BMI1R4GMX3 469 aa11.87□□□□□ -0.51
VPS33A-201ENST00000267199 ABCC6O95255 1503 aa11.87□□□□□ -0.51
VPS33A-201ENST00000267199 LIASO43766 372 aa11.87□□□□□ -0.51
VPS33A-201ENST00000267199 CD4P01730 458 aa11.87□□□□□ -0.51
VPS33A-201ENST00000267199 PAEPP09466 180 aa11.87□□□□□ -0.51
VPS33A-201ENST00000267199 ALDH1A3P47895 512 aa11.87□□□□□ -0.51
VPS33A-201ENST00000267199 FASTKD3Q14CZ7 662 aaKnown RBP11.87□□□□□ -0.51
VPS33A-201ENST00000267199 RFWD3Q6PCD5 774 aa11.87□□□□□ -0.51
VPS33A-201ENST00000267199 SLITRK1Q96PX8 696 aa11.87□□□□□ -0.51
VPS33A-201ENST00000267199 LRRC4CQ9HCJ2 640 aa11.87□□□□□ -0.51
VPS33A-201ENST00000267199 NIPSNAP3AQ9UFN0 247 aaPredicted RBP11.87□□□□□ -0.51
VPS33A-201ENST00000267199 TSPAN16Q9UKR8 245 aa11.87□□□□□ -0.51
VPS33A-201ENST00000267199 SLC12A4Q9UP95 1085 aa11.87□□□□□ -0.51
VPS33A-201ENST00000267199 RUVBL2Q9Y230 463 aaKnown RBP11.87□□□□□ -0.51
VPS33A-201ENST00000267199 LIN7AO14910 233 aaPredicted RBP11.87□□□□□ -0.51
VPS33A-201ENST00000267199 TPBGLP0DKB5 382 aa11.87□□□□□ -0.51
VPS33A-201ENST00000267199 EIF4BP23588 611 aaKnown RBP11.87□□□□□ -0.51
VPS33A-201ENST00000267199 PSMA4P25789 261 aaKnown RBP11.87□□□□□ -0.51
VPS33A-201ENST00000267199 NDST1P52848 882 aa11.87□□□□□ -0.51
VPS33A-201ENST00000267199 MAPK11Q15759 364 aa11.87□□□□□ -0.51
VPS33A-201ENST00000267199 KIZQ2M2Z5 673 aa11.87□□□□□ -0.51
VPS33A-201ENST00000267199 PPP1R15BQ5SWA1 713 aa11.87□□□□□ -0.51
VPS33A-201ENST00000267199 FKBP1CQ5VVH2 108 aa11.87□□□□□ -0.51
VPS33A-201ENST00000267199 LRRC8BQ6P9F7 803 aa11.87□□□□□ -0.51
VPS33A-201ENST00000267199 ZNF572Q7Z3I7 529 aaPredicted RBP11.87□□□□□ -0.51
VPS33A-201ENST00000267199 C12orf56Q8IXR9 622 aa11.87□□□□□ -0.51
VPS33A-201ENST00000267199 IFT43Q96FT9 208 aa11.87□□□□□ -0.51
VPS33A-201ENST00000267199 MAGEB5Q9BZ81 275 aa11.87□□□□□ -0.51
VPS33A-201ENST00000267199 PORCNQ9H237 461 aa11.87□□□□□ -0.51
VPS33A-201ENST00000267199 UBP1Q9NZI7 540 aa11.87□□□□□ -0.51
VPS33A-201ENST00000267199 BLOC1S6Q9UL45 172 aa11.87□□□□□ -0.51
VPS33A-201ENST00000267199 ADGRA2Q96PE1 1338 aa11.87□□□□□ -0.51
VPS33A-201ENST00000267199 ZMYM2Q9UBW7 1377 aa11.87□□□□□ -0.51
VPS33A-201ENST00000267199 ADGRA3Q8IWK6 1321 aa11.87□□□□□ -0.51
VPS33A-201ENST00000267199 LINC00854A0A1B0GVQ3 168 aa11.87□□□□□ -0.51
VPS33A-201ENST00000267199 VAV1P15498 845 aa11.87□□□□□ -0.51
VPS33A-201ENST00000267199 NUMBP49757 651 aa11.87□□□□□ -0.51
VPS33A-201ENST00000267199 NUP107P57740 925 aa11.87□□□□□ -0.51
VPS33A-201ENST00000267199 RBBP7Q16576 425 aa11.87□□□□□ -0.51
VPS33A-201ENST00000267199 OTUD3Q5T2D3 398 aaPredicted RBP11.87□□□□□ -0.51
VPS33A-201ENST00000267199 SH3BP5LQ7L8J4 393 aa11.87□□□□□ -0.51
VPS33A-201ENST00000267199 NET1Q7Z628 596 aaPredicted RBP11.87□□□□□ -0.51
VPS33A-201ENST00000267199 SLFN11Q7Z7L1 901 aa11.87□□□□□ -0.51
VPS33A-201ENST00000267199 PATL1Q86TB9 770 aaKnown RBP11.87□□□□□ -0.51
VPS33A-201ENST00000267199 CPNE8Q86YQ8 564 aa11.87□□□□□ -0.51
VPS33A-201ENST00000267199 PCDH20Q8N6Y1 951 aaKnown RBP11.87□□□□□ -0.51
VPS33A-201ENST00000267199 ZNF513Q8N8E2 541 aaPredicted RBP11.87□□□□□ -0.51
VPS33A-201ENST00000267199 PIWIL2Q8TC59 973 aaKnown RBP11.87□□□□□ -0.51
VPS33A-201ENST00000267199 IARS2Q9NSE4 1012 aaKnown RBP11.87□□□□□ -0.51
VPS33A-201ENST00000267199 AP4E1Q9UPM8 1137 aa11.87□□□□□ -0.51
VPS33A-201ENST00000267199 DUOX1Q9NRD9 1551 aa11.86□□□□□ -0.51
VPS33A-201ENST00000267199 DISP2A7MBM2 1401 aa11.86□□□□□ -0.51
VPS33A-201ENST00000267199 GOLGA8TH3BQL2 631 aa11.86□□□□□ -0.51
VPS33A-201ENST00000267199 TBC1D4O60343 1298 aa11.86□□□□□ -0.51
VPS33A-201ENST00000267199 NPM3O75607 178 aaKnown RBP11.86□□□□□ -0.51
VPS33A-201ENST00000267199 ZNF189O75820 626 aaPredicted RBP11.86□□□□□ -0.51
VPS33A-201ENST00000267199 WFS1O76024 890 aa11.86□□□□□ -0.51
VPS33A-201ENST00000267199 LYNP07948 512 aa11.86□□□□□ -0.51
VPS33A-201ENST00000267199 CYP2C8P10632 490 aa11.86□□□□□ -0.51
VPS33A-201ENST00000267199 RPL22P35268 128 aaKnown RBP11.86□□□□□ -0.51
VPS33A-201ENST00000267199 GALK1P51570 392 aa11.86□□□□□ -0.51
VPS33A-201ENST00000267199 CRADDP78560 199 aa11.86□□□□□ -0.51
VPS33A-201ENST00000267199 LAMC2Q13753 1193 aa11.86□□□□□ -0.51
VPS33A-201ENST00000267199 CYP4X1Q8N118 509 aa11.86□□□□□ -0.51
VPS33A-201ENST00000267199 ZFRQ96KR1 1074 aaKnown RBP11.86□□□□□ -0.51
VPS33A-201ENST00000267199 ZNF570Q96NI8 536 aa11.86□□□□□ -0.51
VPS33A-201ENST00000267199 BRD8Q9H0E9 1235 aa11.86□□□□□ -0.51
VPS33A-201ENST00000267199 CYP3A43Q9HB55 503 aa11.86□□□□□ -0.51
VPS33A-201ENST00000267199 SP110Q9HB58 689 aa11.86□□□□□ -0.51
VPS33A-201ENST00000267199 GRHL1Q9NZI5 618 aa11.86□□□□□ -0.51
VPS33A-201ENST00000267199 WDR27A2RRH5 827 aa11.86□□□□□ -0.51
VPS33A-201ENST00000267199 MYO1GB0I1T2 1018 aa11.86□□□□□ -0.51
VPS33A-201ENST00000267199 NCAM1P13591 858 aa11.86□□□□□ -0.51
VPS33A-201ENST00000267199 ME2P23368 584 aa11.86□□□□□ -0.51
VPS33A-201ENST00000267199 PSMD7P51665 324 aa11.86□□□□□ -0.51
VPS33A-201ENST00000267199 UBE3AQ05086 875 aa11.86□□□□□ -0.51
VPS33A-201ENST00000267199 FAM83EQ2M2I3 478 aa11.86□□□□□ -0.51
VPS33A-201ENST00000267199 PPHLN1Q8NEY8 458 aaKnown RBP11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms