RNA–Protein interactions for RNA: ENST00000264883.7

NUP54-201, Transcript of nucleoporin 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP54, Length 2,367 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-201ENST00000264883 NOMO3P69849 1222 aa13.54□□□□□ -0.24
NUP54-201ENST00000264883 TAP1Q03518 808 aa13.54□□□□□ -0.24
NUP54-201ENST00000264883 CLPPQ16740 277 aaPredicted RBP13.54□□□□□ -0.24
NUP54-201ENST00000264883 FAM102BQ5T8I3 360 aa13.54□□□□□ -0.24
NUP54-201ENST00000264883 ITPRIPL1Q6GPH6 555 aa13.54□□□□□ -0.24
NUP54-201ENST00000264883 LDHDQ86WU2 507 aa13.54□□□□□ -0.24
NUP54-201ENST00000264883 NUDCD3Q8IVD9 361 aa13.54□□□□□ -0.24
NUP54-201ENST00000264883 POMGNT1Q8WZA1 660 aa13.54□□□□□ -0.24
NUP54-201ENST00000264883 WDR83Q9BRX9 315 aaKnown RBP13.54□□□□□ -0.24
NUP54-201ENST00000264883 SHCBP1LQ9BZQ2 653 aa13.54□□□□□ -0.24
NUP54-201ENST00000264883 PAIP1Q9H074 479 aaKnown RBP13.54□□□□□ -0.24
NUP54-201ENST00000264883 TRPC7Q9HCX4 862 aa13.54□□□□□ -0.24
NUP54-201ENST00000264883 KMT5AQ9NQR1 393 aa13.54□□□□□ -0.24
NUP54-201ENST00000264883 SLC38A7Q9NVC3 462 aa13.54□□□□□ -0.24
NUP54-201ENST00000264883 KLHL11Q9NVR0 708 aa13.54□□□□□ -0.24
NUP54-201ENST00000264883 TCEAL9Q9UHQ7 104 aa13.54□□□□□ -0.24
NUP54-201ENST00000264883 A0A1B0GTW7 788 aa13.54□□□□□ -0.24
NUP54-201ENST00000264883 PI4K2BG5E9Z4 385 aa13.54□□□□□ -0.24
NUP54-201ENST00000264883 OXSR1O95747 527 aaPredicted RBP13.54□□□□□ -0.24
NUP54-201ENST00000264883 FUCA1P04066 466 aa13.54□□□□□ -0.24
NUP54-201ENST00000264883 ATF7P17544 494 aaPredicted RBP13.54□□□□□ -0.24
NUP54-201ENST00000264883 ITGAXP20702 1163 aa13.54□□□□□ -0.24
NUP54-201ENST00000264883 NPTX2P47972 431 aa13.54□□□□□ -0.24
NUP54-201ENST00000264883 SLC5A3P53794 718 aa13.54□□□□□ -0.24
NUP54-201ENST00000264883 CDKL1Q00532 357 aa13.54□□□□□ -0.24
NUP54-201ENST00000264883 LLGL2Q6P1M3 1020 aa13.54□□□□□ -0.24
NUP54-201ENST00000264883 SAMD7Q7Z3H4 446 aa13.54□□□□□ -0.24
NUP54-201ENST00000264883 DDHD1Q8NEL9 900 aa13.54□□□□□ -0.24
NUP54-201ENST00000264883 TRPC4APQ8TEL6 797 aa13.54□□□□□ -0.24
NUP54-201ENST00000264883 BORCS5Q969J3 196 aa13.54□□□□□ -0.24
NUP54-201ENST00000264883 RANBP9Q96S59 729 aa13.54□□□□□ -0.24
NUP54-201ENST00000264883 GPATCH1Q9BRR8 931 aaKnown RBP13.54□□□□□ -0.24
NUP54-201ENST00000264883 TRIM56Q9BRZ2 755 aaKnown RBP13.54□□□□□ -0.24
NUP54-201ENST00000264883 SIRPGQ9P1W8 387 aa13.54□□□□□ -0.24
NUP54-201ENST00000264883 IGSF9Q9P2J2 1179 aa13.54□□□□□ -0.24
NUP54-201ENST00000264883 FRMD4AQ9P2Q2 1039 aaPredicted RBP13.54□□□□□ -0.24
NUP54-201ENST00000264883 FARP1Q9Y4F1 1045 aaPredicted RBP13.54□□□□□ -0.24
NUP54-201ENST00000264883 GPC6Q9Y625 555 aaPredicted RBP13.54□□□□□ -0.24
NUP54-201ENST00000264883 GJA3Q9Y6H8 435 aa13.54□□□□□ -0.24
NUP54-201ENST00000264883 XPO1O14980 1071 aaKnown RBP13.53□□□□□ -0.24
NUP54-201ENST00000264883 FBXO21O94952 628 aa13.53□□□□□ -0.24
NUP54-201ENST00000264883 STAMBPO95630 424 aa13.53□□□□□ -0.24
NUP54-201ENST00000264883 TBXAS1P24557 533 aaPredicted RBP13.53□□□□□ -0.24
NUP54-201ENST00000264883 HMOX2P30519 316 aa13.53□□□□□ -0.24
NUP54-201ENST00000264883 KRT76Q01546 638 aa13.53□□□□□ -0.24
NUP54-201ENST00000264883 MTM1Q13496 603 aa13.53□□□□□ -0.24
NUP54-201ENST00000264883 ADGRE1Q14246 886 aa13.53□□□□□ -0.24
NUP54-201ENST00000264883 TKFCQ3LXA3 575 aa13.53□□□□□ -0.24
NUP54-201ENST00000264883 BBS9Q3SYG4 887 aa13.53□□□□□ -0.24
NUP54-201ENST00000264883 ZFYVE27Q5T4F4 411 aa13.53□□□□□ -0.24
NUP54-201ENST00000264883 ANKRD22Q5VYY1 191 aa13.53□□□□□ -0.24
NUP54-201ENST00000264883 TMEM126BQ8IUX1 230 aa13.53□□□□□ -0.24
NUP54-201ENST00000264883 PPIL6Q8IXY8 311 aa13.53□□□□□ -0.24
NUP54-201ENST00000264883 GALNT4Q8N4A0 578 aa13.53□□□□□ -0.24
NUP54-201ENST00000264883 ADCY4Q8NFM4 1077 aa13.53□□□□□ -0.24
NUP54-201ENST00000264883 SLC44A1Q8WWI5 657 aa13.53□□□□□ -0.24
NUP54-201ENST00000264883 KCNK16Q96T55 309 aa13.53□□□□□ -0.24
NUP54-201ENST00000264883 C11orf70Q9BRQ4 267 aa13.53□□□□□ -0.24
NUP54-201ENST00000264883 APOL6Q9BWW8 343 aa13.53□□□□□ -0.24
NUP54-201ENST00000264883 C20orf27Q9GZN8 174 aa13.53□□□□□ -0.24
NUP54-201ENST00000264883 NACA2Q9H009 215 aa13.53□□□□□ -0.24
NUP54-201ENST00000264883 ARMC7Q9H6L4 198 aa13.53□□□□□ -0.24
NUP54-201ENST00000264883 TRNAU1APQ9NX07 287 aaKnown RBP13.53□□□□□ -0.24
NUP54-201ENST00000264883 PLLPQ9Y342 182 aa13.53□□□□□ -0.24
NUP54-201ENST00000264883 SNCAIPQ9Y6H5 919 aa13.53□□□□□ -0.24
NUP54-201ENST00000264883 SQORQ9Y6N5 450 aa13.53□□□□□ -0.24
NUP54-201ENST00000264883 A0A0B4J269 797 aa13.53□□□□□ -0.24
NUP54-201ENST00000264883 CCDC162PA2VCL2 907 aa13.53□□□□□ -0.24
NUP54-201ENST00000264883 WDR64B1ANS9 1081 aa13.53□□□□□ -0.24
NUP54-201ENST00000264883 KRT1P04264 644 aa13.53□□□□□ -0.24
NUP54-201ENST00000264883 PSMC3P17980 439 aa13.53□□□□□ -0.24
NUP54-201ENST00000264883 EIF2B2P49770 351 aaKnown RBP13.53□□□□□ -0.24
NUP54-201ENST00000264883 TUBB3Q13509 450 aa13.53□□□□□ -0.24
NUP54-201ENST00000264883 CCDC153Q494R4 210 aa13.53□□□□□ -0.24
NUP54-201ENST00000264883 C2CD6Q53TS8 623 aa13.53□□□□□ -0.24
NUP54-201ENST00000264883 XKR9Q5GH70 373 aa13.53□□□□□ -0.24
NUP54-201ENST00000264883 RWDD4Q6NW29 188 aaKnown RBP13.53□□□□□ -0.24
NUP54-201ENST00000264883 FASTKD5Q7L8L6 764 aaKnown RBP13.53□□□□□ -0.24
NUP54-201ENST00000264883 TICAM1Q8IUC6 712 aa13.53□□□□□ -0.24
NUP54-201ENST00000264883 CENPSQ8N2Z9 138 aa13.53□□□□□ -0.24
NUP54-201ENST00000264883 GSDMBQ8TAX9 411 aa13.53□□□□□ -0.24
NUP54-201ENST00000264883 TMEM121Q9BTD3 319 aa13.53□□□□□ -0.24
NUP54-201ENST00000264883 SLC2A11Q9BYW1 496 aa13.53□□□□□ -0.24
NUP54-201ENST00000264883 TOPORSQ9NS56 1045 aaPredicted RBP13.53□□□□□ -0.24
NUP54-201ENST00000264883 ZBTB21Q9ULJ3 1066 aa13.53□□□□□ -0.24
NUP54-201ENST00000264883 CNTN6Q9UQ52 1028 aa13.53□□□□□ -0.24
NUP54-201ENST00000264883 APOBEC2Q9Y235 224 aaKnown RBP13.53□□□□□ -0.24
NUP54-201ENST00000264883 SRCAPQ6ZRS2 3230 aa13.52□□□□□ -0.24
NUP54-201ENST00000264883 CYB561D2O14569 222 aa13.52□□□□□ -0.24
NUP54-201ENST00000264883 SNNO75324 88 aaPredicted RBP13.52□□□□□ -0.24
NUP54-201ENST00000264883 ICAM1P05362 532 aa13.52□□□□□ -0.24
NUP54-201ENST00000264883 CALB1P05937 261 aa13.52□□□□□ -0.24
NUP54-201ENST00000264883 CDH3P22223 829 aa13.52□□□□□ -0.24
NUP54-201ENST00000264883 ACAT1P24752 427 aaKnown RBP13.52□□□□□ -0.24
NUP54-201ENST00000264883 PRDX6P30041 224 aa13.52□□□□□ -0.24
NUP54-201ENST00000264883 MTMR1Q13613 665 aa13.52□□□□□ -0.24
NUP54-201ENST00000264883 TNFAIP1Q13829 316 aa13.52□□□□□ -0.24
NUP54-201ENST00000264883 ZNF829Q3KNS6 432 aaPredicted RBP13.52□□□□□ -0.24
NUP54-201ENST00000264883 ZACNQ401N2 412 aa13.52□□□□□ -0.24
NUP54-201ENST00000264883 TFDP3Q5H9I0 405 aa13.52□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms