RNA–Protein interactions for RNA: ENST00000263897.9

USE1-201, Transcript of unconventional SNARE in the ER 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene USE1, Length 843 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-201ENST00000263897 STK32AQ8WU08 396 aa16.79■□□□□ 0.28
USE1-201ENST00000263897 ACOX2Q99424 681 aa16.79■□□□□ 0.28
USE1-201ENST00000263897 PCDHGA5Q9Y5G8 931 aa16.79■□□□□ 0.28
USE1-201ENST00000263897 MED7O43513 233 aa16.78■□□□□ 0.28
USE1-201ENST00000263897 CYBBP04839 570 aa16.78■□□□□ 0.28
USE1-201ENST00000263897 ZNF806P0C7X5 589 aa16.78■□□□□ 0.28
USE1-201ENST00000263897 GBP1P32455 592 aa16.78■□□□□ 0.28
USE1-201ENST00000263897 WASP42768 502 aa16.78■□□□□ 0.28
USE1-201ENST00000263897 APBA1Q02410 837 aa16.78■□□□□ 0.28
USE1-201ENST00000263897 ARHGAP44Q17R89 818 aa16.78■□□□□ 0.28
USE1-201ENST00000263897 PLA2G2CQ5R387 149 aa16.78■□□□□ 0.28
USE1-201ENST00000263897 SMYD5Q6GMV2 418 aa16.78■□□□□ 0.28
USE1-201ENST00000263897 SDE2Q6IQ49 451 aa16.78■□□□□ 0.28
USE1-201ENST00000263897 DENND1BQ6P3S1 775 aa16.78■□□□□ 0.28
USE1-201ENST00000263897 DGLUCYQ7Z3D6 616 aa16.78■□□□□ 0.28
USE1-201ENST00000263897 FAM114A1Q8IWE2 563 aa16.78■□□□□ 0.28
USE1-201ENST00000263897 CHPFQ8IZ52 775 aa16.78■□□□□ 0.28
USE1-201ENST00000263897 DDI1Q8WTU0 396 aa16.78■□□□□ 0.28
USE1-201ENST00000263897 HMGB4Q8WW32 186 aa16.78■□□□□ 0.28
USE1-201ENST00000263897 GOLGA1Q92805 767 aa16.78■□□□□ 0.28
USE1-201ENST00000263897 SLC4A5Q9BY07 1137 aa16.78■□□□□ 0.28
USE1-201ENST00000263897 SLC2A11Q9BYW1 496 aa16.78■□□□□ 0.28
USE1-201ENST00000263897 MIS12Q9H081 205 aa16.78■□□□□ 0.28
USE1-201ENST00000263897 ACP6Q9NPH0 428 aa16.78■□□□□ 0.28
USE1-201ENST00000263897 APEX2Q9UBZ4 518 aa16.78■□□□□ 0.28
USE1-201ENST00000263897 DACH1Q9UI36 760 aa16.78■□□□□ 0.28
USE1-201ENST00000263897 STOML2Q9UJZ1 356 aa16.78■□□□□ 0.28
USE1-201ENST00000263897 SPTBN2O15020 2390 aa16.78■□□□□ 0.28
USE1-201ENST00000263897 A0A1W2PQF6 199 aa16.77■□□□□ 0.28
USE1-201ENST00000263897 TCRBV21S2A2A0A5A6 115 aa16.77■□□□□ 0.28
USE1-201ENST00000263897 BECN2A8MW95 431 aa16.77■□□□□ 0.28
USE1-201ENST00000263897 MSI1O43347 362 aaKnown RBP16.77■□□□□ 0.28
USE1-201ENST00000263897 THAP12O43422 761 aa16.77■□□□□ 0.28
USE1-201ENST00000263897 FYNP06241 537 aa16.77■□□□□ 0.28
USE1-201ENST00000263897 HOXB2P14652 356 aa16.77■□□□□ 0.28
USE1-201ENST00000263897 GNA15P30679 374 aa16.77■□□□□ 0.28
USE1-201ENST00000263897 P2RY2P41231 377 aa16.77■□□□□ 0.28
USE1-201ENST00000263897 ACADSBP45954 432 aa16.77■□□□□ 0.28
USE1-201ENST00000263897 ATXN1P54253 815 aaKnown RBP16.77■□□□□ 0.28
USE1-201ENST00000263897 CCDC6Q16204 474 aa16.77■□□□□ 0.28
USE1-201ENST00000263897 MAN2A1Q16706 1144 aa16.77■□□□□ 0.28
USE1-201ENST00000263897 MPPE1Q53F39 396 aa16.77■□□□□ 0.28
USE1-201ENST00000263897 CT47A1Q5JQC4 288 aaPredicted RBP16.77■□□□□ 0.28
USE1-201ENST00000263897 ADGRF1Q5T601 910 aa16.77■□□□□ 0.28
USE1-201ENST00000263897 PGBD3Q8N328 593 aa16.77■□□□□ 0.28
USE1-201ENST00000263897 RLN3Q8WXF3 142 aa16.77■□□□□ 0.28
USE1-201ENST00000263897 SHC3Q92529 594 aa16.77■□□□□ 0.28
USE1-201ENST00000263897 PIWIL1Q96J94 861 aaKnown RBP16.77■□□□□ 0.28
USE1-201ENST00000263897 GABRG3Q99928 467 aa16.77■□□□□ 0.28
USE1-201ENST00000263897 ST7Q9NRC1 585 aa16.77■□□□□ 0.28
USE1-201ENST00000263897 BCCIPQ9P287 314 aaKnown RBP eCLIP16.77■□□□□ 0.28
USE1-201ENST00000263897 CDV3Q9UKY7 258 aaKnown RBP16.77■□□□□ 0.28
USE1-201ENST00000263897 CLEC4EQ9ULY5 219 aa16.77■□□□□ 0.28
USE1-201ENST00000263897 LOC105378220A0A1B0GUY1 285 aaPredicted RBP16.76■□□□□ 0.27
USE1-201ENST00000263897 GFRA2O00451 464 aa16.76■□□□□ 0.27
USE1-201ENST00000263897 SART1O43290 800 aaKnown RBP16.76■□□□□ 0.27
USE1-201ENST00000263897 LATS1O95835 1130 aa16.76■□□□□ 0.27
USE1-201ENST00000263897 IGLV3-27P01718 113 aa16.76■□□□□ 0.27
USE1-201ENST00000263897 GABRG2P18507 467 aa16.76■□□□□ 0.27
USE1-201ENST00000263897 BCKDHBP21953 392 aa16.76■□□□□ 0.27
USE1-201ENST00000263897 MPLP40238 635 aa16.76■□□□□ 0.27
USE1-201ENST00000263897 USP8P40818 1118 aa16.76■□□□□ 0.27
USE1-201ENST00000263897 BYSLQ13895 437 aaKnown RBP16.76■□□□□ 0.27
USE1-201ENST00000263897 SF3A2Q15428 464 aaKnown RBP16.76■□□□□ 0.27
USE1-201ENST00000263897 GEN1Q17RS7 908 aa16.76■□□□□ 0.27
USE1-201ENST00000263897 MAP7D1Q3KQU3 841 aa16.76■□□□□ 0.27
USE1-201ENST00000263897 PMS2CLQ68D20 193 aa16.76■□□□□ 0.27
USE1-201ENST00000263897 TMEM110Q86TL2 294 aa16.76■□□□□ 0.27
USE1-201ENST00000263897 UNC45BQ8IWX7 931 aa16.76■□□□□ 0.27
USE1-201ENST00000263897 NETO1Q8TDF5 533 aa16.76■□□□□ 0.27
USE1-201ENST00000263897 TMA16Q96EY4 203 aaKnown RBP16.76■□□□□ 0.27
USE1-201ENST00000263897 TUBGCP2Q9BSJ2 902 aa16.76■□□□□ 0.27
USE1-201ENST00000263897 RTKNQ9BST9 563 aa16.76■□□□□ 0.27
USE1-201ENST00000263897 NDST4Q9H3R1 872 aa16.76■□□□□ 0.27
USE1-201ENST00000263897 CD248Q9HCU0 757 aa16.76■□□□□ 0.27
USE1-201ENST00000263897 SIX2Q9NPC8 291 aa16.76■□□□□ 0.27
USE1-201ENST00000263897 CYTH4Q9UIA0 394 aa16.76■□□□□ 0.27
USE1-201ENST00000263897 NUP205Q92621 2012 aa16.75■□□□□ 0.27
USE1-201ENST00000263897 BCLAF3A2AJT9 711 aaKnown RBP16.75■□□□□ 0.27
USE1-201ENST00000263897 WASH3PC4AMC7 463 aa16.75■□□□□ 0.27
USE1-201ENST00000263897 GDF9O60383 454 aa16.75■□□□□ 0.27
USE1-201ENST00000263897 TSPAN3O60637 253 aa16.75■□□□□ 0.27
USE1-201ENST00000263897 NCAM1P13591 858 aa16.75■□□□□ 0.27
USE1-201ENST00000263897 TBX4P57082 545 aa16.75■□□□□ 0.27
USE1-201ENST00000263897 ZNF445P59923 1031 aa16.75■□□□□ 0.27
USE1-201ENST00000263897 CREB5Q02930 508 aa16.75■□□□□ 0.27
USE1-201ENST00000263897 RING1Q06587 406 aa16.75■□□□□ 0.27
USE1-201ENST00000263897 VWA3BQ502W6 1294 aa16.75■□□□□ 0.27
USE1-201ENST00000263897 MIIPQ5JXC2 388 aa16.75■□□□□ 0.27
USE1-201ENST00000263897 BEND5Q7L4P6 421 aa16.75■□□□□ 0.27
USE1-201ENST00000263897 FRMD1Q8N878 549 aa16.75■□□□□ 0.27
USE1-201ENST00000263897 IPO4Q8TEX9 1081 aaKnown RBP16.75■□□□□ 0.27
USE1-201ENST00000263897 AZIN2Q96A70 460 aa16.75■□□□□ 0.27
USE1-201ENST00000263897 VPS45Q9NRW7 570 aa16.75■□□□□ 0.27
USE1-201ENST00000263897 CACNA2D2Q9NY47 1150 aa16.75■□□□□ 0.27
USE1-201ENST00000263897 DNAJC12Q9UKB3 198 aa16.75■□□□□ 0.27
USE1-201ENST00000263897 NAALADL1Q9UQQ1 740 aa16.75■□□□□ 0.27
USE1-201ENST00000263897 CNOT1A5YKK6 2376 aaKnown RBP16.74■□□□□ 0.27
USE1-201ENST00000263897 DCHS1Q96JQ0 3298 aa16.74■□□□□ 0.27
USE1-201ENST00000263897 FOXN3O00409 490 aaPredicted RBP16.74■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms