RNA–Protein interactions for RNA: ENST00000263856.8

CHMP3-201, Transcript of charged multivesicular body protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP3, Length 3,171 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-201ENST00000263856 DLK2Q6UY11 383 aa12.8□□□□□ -0.36
CHMP3-201ENST00000263856 CMC1Q7Z7K0 106 aa12.8□□□□□ -0.36
CHMP3-201ENST00000263856 ADGRF2Q8IZF7 708 aa12.8□□□□□ -0.36
CHMP3-201ENST00000263856 AGBL3Q8NEM8 1001 aa12.8□□□□□ -0.36
CHMP3-201ENST00000263856 C7orf26Q96N11 449 aa12.8□□□□□ -0.36
CHMP3-201ENST00000263856 FRMD8P1Q9BZ68 369 aaPredicted RBP12.8□□□□□ -0.36
CHMP3-201ENST00000263856 PCDH18Q9HCL0 1135 aa12.8□□□□□ -0.36
CHMP3-201ENST00000263856 PGAP2Q9UHJ9 254 aa12.8□□□□□ -0.36
CHMP3-201ENST00000263856 EVPLQ92817 2033 aa12.8□□□□□ -0.36
CHMP3-201ENST00000263856 COL4A5P29400 1685 aa12.8□□□□□ -0.36
CHMP3-201ENST00000263856 FAM189A1O60320 539 aa12.79□□□□□ -0.36
CHMP3-201ENST00000263856 MAGEC1O60732 1142 aa12.79□□□□□ -0.36
CHMP3-201ENST00000263856 STAG3L1P0CL83 205 aa12.79□□□□□ -0.36
CHMP3-201ENST00000263856 LCP1P13796 627 aa12.79□□□□□ -0.36
CHMP3-201ENST00000263856 GPD2P43304 727 aa12.79□□□□□ -0.36
CHMP3-201ENST00000263856 COPAP53621 1224 aa12.79□□□□□ -0.36
CHMP3-201ENST00000263856 AQP4P55087 323 aa12.79□□□□□ -0.36
CHMP3-201ENST00000263856 EFCAB12Q6NXP0 572 aa12.79□□□□□ -0.36
CHMP3-201ENST00000263856 KCNT2Q6UVM3 1135 aa12.79□□□□□ -0.36
CHMP3-201ENST00000263856 C10orf107Q8IVU9 208 aa12.79□□□□□ -0.36
CHMP3-201ENST00000263856 GALNT15Q8N3T1 639 aa12.79□□□□□ -0.36
CHMP3-201ENST00000263856 NME8Q8N427 588 aa12.79□□□□□ -0.36
CHMP3-201ENST00000263856 PIWIL2Q8TC59 973 aaKnown RBP12.79□□□□□ -0.36
CHMP3-201ENST00000263856 CLEC4CQ8WTT0 213 aa12.79□□□□□ -0.36
CHMP3-201ENST00000263856 SEPT1Q8WYJ6 367 aa12.79□□□□□ -0.36
CHMP3-201ENST00000263856 CCDC106Q9BWC9 280 aa12.79□□□□□ -0.36
CHMP3-201ENST00000263856 ASB3Q9Y575 518 aa12.79□□□□□ -0.36
CHMP3-201ENST00000263856 COL11A1P12107 1806 aaPredicted RBP12.79□□□□□ -0.36
CHMP3-201ENST00000263856 GPR25O00155 361 aa12.79□□□□□ -0.36
CHMP3-201ENST00000263856 HCRTO43612 131 aa12.79□□□□□ -0.36
CHMP3-201ENST00000263856 USP12O75317 370 aa12.79□□□□□ -0.36
CHMP3-201ENST00000263856 MAFO75444 373 aaPredicted RBP12.79□□□□□ -0.36
CHMP3-201ENST00000263856 MGAT1P26572 445 aa12.79□□□□□ -0.36
CHMP3-201ENST00000263856 TYK2P29597 1187 aa12.79□□□□□ -0.36
CHMP3-201ENST00000263856 MLH1P40692 756 aa12.79□□□□□ -0.36
CHMP3-201ENST00000263856 MCCD1P59942 119 aaPredicted RBP12.79□□□□□ -0.36
CHMP3-201ENST00000263856 SURF1Q15526 300 aa12.79□□□□□ -0.36
CHMP3-201ENST00000263856 SFT2D3Q587I9 215 aa12.79□□□□□ -0.36
CHMP3-201ENST00000263856 PQLC3Q8N755 202 aa12.79□□□□□ -0.36
CHMP3-201ENST00000263856 FNIP1Q8TF40 1166 aa12.79□□□□□ -0.36
CHMP3-201ENST00000263856 PPP1R13LQ8WUF5 828 aa12.79□□□□□ -0.36
CHMP3-201ENST00000263856 GATA6Q92908 595 aa12.79□□□□□ -0.36
CHMP3-201ENST00000263856 ATP2A3Q93084 1043 aa12.79□□□□□ -0.36
CHMP3-201ENST00000263856 GCNAQ96QF7 691 aa12.79□□□□□ -0.36
CHMP3-201ENST00000263856 LGMNQ99538 433 aa12.79□□□□□ -0.36
CHMP3-201ENST00000263856 OXCT2Q9BYC2 517 aaPredicted RBP12.79□□□□□ -0.36
CHMP3-201ENST00000263856 THAP1Q9NVV9 213 aa12.79□□□□□ -0.36
CHMP3-201ENST00000263856 PSAT1Q9Y617 370 aa12.79□□□□□ -0.36
CHMP3-201ENST00000263856 C2CD4BA6NLJ0 364 aa12.79□□□□□ -0.36
CHMP3-201ENST00000263856 SERPINA6P08185 405 aa12.79□□□□□ -0.36
CHMP3-201ENST00000263856 ERVK-10P10266 1014 aa12.79□□□□□ -0.36
CHMP3-201ENST00000263856 ADORA2BP29275 332 aa12.79□□□□□ -0.36
CHMP3-201ENST00000263856 RAP1GDS1P52306 607 aa12.79□□□□□ -0.36
CHMP3-201ENST00000263856 PGGT1BP53609 377 aa12.79□□□□□ -0.36
CHMP3-201ENST00000263856 ENPEPQ07075 957 aa12.79□□□□□ -0.36
CHMP3-201ENST00000263856 MED21Q13503 144 aa12.79□□□□□ -0.36
CHMP3-201ENST00000263856 MMEL1Q495T6 779 aa12.79□□□□□ -0.36
CHMP3-201ENST00000263856 CCDC14Q49A88 953 aa12.79□□□□□ -0.36
CHMP3-201ENST00000263856 TEX44Q53QW1 395 aa12.79□□□□□ -0.36
CHMP3-201ENST00000263856 ARMC3Q5W041 872 aa12.79□□□□□ -0.36
CHMP3-201ENST00000263856 PDPK2PQ6A1A2 396 aa12.79□□□□□ -0.36
CHMP3-201ENST00000263856 PYROXD2Q8N2H3 581 aa12.79□□□□□ -0.36
CHMP3-201ENST00000263856 OR6Y1Q8NGX8 325 aa12.79□□□□□ -0.36
CHMP3-201ENST00000263856 GDPD5Q8WTR4 605 aa12.79□□□□□ -0.36
CHMP3-201ENST00000263856 NMD3Q96D46 503 aaKnown RBP12.79□□□□□ -0.36
CHMP3-201ENST00000263856 LHX5Q9H2C1 402 aa12.79□□□□□ -0.36
CHMP3-201ENST00000263856 PLAC1Q9HBJ0 212 aa12.79□□□□□ -0.36
CHMP3-201ENST00000263856 AKT3Q9Y243 479 aa12.79□□□□□ -0.36
CHMP3-201ENST00000263856 HMX2A2RU54 273 aa12.78□□□□□ -0.36
CHMP3-201ENST00000263856 SPDYE16A6NNV3 312 aaPredicted RBP12.78□□□□□ -0.36
CHMP3-201ENST00000263856 ABLIM1O14639 778 aa12.78□□□□□ -0.36
CHMP3-201ENST00000263856 AIM2O14862 343 aa12.78□□□□□ -0.36
CHMP3-201ENST00000263856 GSTA2P09210 222 aa12.78□□□□□ -0.36
CHMP3-201ENST00000263856 RAG1P15918 1043 aa12.78□□□□□ -0.36
CHMP3-201ENST00000263856 SERPINB5P36952 375 aa12.78□□□□□ -0.36
CHMP3-201ENST00000263856 IER5Q5VY09 327 aa12.78□□□□□ -0.36
CHMP3-201ENST00000263856 PMF1Q6P1K2 205 aa12.78□□□□□ -0.36
CHMP3-201ENST00000263856 SDCCAG8Q86SQ7 713 aaPredicted RBP12.78□□□□□ -0.36
CHMP3-201ENST00000263856 MFN1Q8IWA4 741 aa12.78□□□□□ -0.36
CHMP3-201ENST00000263856 ST13P4Q8IZP2 240 aaPredicted RBP12.78□□□□□ -0.36
CHMP3-201ENST00000263856 REPS2Q8NFH8 660 aa12.78□□□□□ -0.36
CHMP3-201ENST00000263856 FAM149B1Q96BN6 582 aa12.78□□□□□ -0.36
CHMP3-201ENST00000263856 MCRS1Q96EZ8 462 aa12.78□□□□□ -0.36
CHMP3-201ENST00000263856 EBNA1BP2Q99848 306 aaKnown RBP12.78□□□□□ -0.36
CHMP3-201ENST00000263856 UNKQ9C0B0 810 aaKnown RBP12.78□□□□□ -0.36
CHMP3-201ENST00000263856 SIRPGQ9P1W8 387 aa12.78□□□□□ -0.36
CHMP3-201ENST00000263856 PDP2Q9P2J9 529 aa12.78□□□□□ -0.36
CHMP3-201ENST00000263856 SNX9Q9Y5X1 595 aa12.78□□□□□ -0.36
CHMP3-201ENST00000263856 AK5Q9Y6K8 562 aa12.78□□□□□ -0.36
CHMP3-201ENST00000263856 hCG_2014768A0A024R1R8 64 aa12.78□□□□□ -0.36
CHMP3-201ENST00000263856 CILPO75339 1184 aa12.78□□□□□ -0.36
CHMP3-201ENST00000263856 PDGFRBP09619 1106 aa12.78□□□□□ -0.36
CHMP3-201ENST00000263856 CYP3A5P20815 502 aa12.78□□□□□ -0.36
CHMP3-201ENST00000263856 PPP1R26Q5T8A7 1209 aaPredicted RBP12.78□□□□□ -0.36
CHMP3-201ENST00000263856 SULF1Q8IWU6 871 aa12.78□□□□□ -0.36
CHMP3-201ENST00000263856 AZIN2Q96A70 460 aa12.78□□□□□ -0.36
CHMP3-201ENST00000263856 ZNF778Q96MU6 729 aa12.78□□□□□ -0.36
CHMP3-201ENST00000263856 NIFKQ9BYG3 293 aaKnown RBP12.78□□□□□ -0.36
CHMP3-201ENST00000263856 R3HDMLQ9H3Y0 253 aa12.78□□□□□ -0.36
CHMP3-201ENST00000263856 PLA2G4CQ9UP65 541 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 64.9 ms